XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTT
TGTTCCGTTCTGAGCCCCATTTTTTAATGGGGTTGTTTGATTTTCTGAGG
TCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGA
TTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTCTTTGTCT
TATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCC
CATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAG
GAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCT
CTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGATCCATTTA
GATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCT
ACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTT
TCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAG
GTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTG
TCTGTCTCTATACCAGTACCATGCAGTTTTTACCACAATTGCTCTGTAGT
AAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTTTTTTATCCTTG
AGAAGAGTTTTTGCTATTCTAGGTTTTTTGTAAT

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTGTAGAGCTATAATAGGAGATTGGAAACCTA
GACTAATTGGTTAGCATTTAGTGTCATAAATTAGCCAGGTGCTATTGCAT
TTAGCTCTAGCAGCGGCCATGTAAATTAGGGACTTTTATTGTGTTCCATT
CTGACAGGTGAGGAAAATTTAAGCTCATAAAGCTTTAATTATCTTTTCTC
TTGGACTATAGTAAGTCTCAAAGCTAATATGCAAGCCGAGACATATCTGA
TTCCAGAATCCATGTTCTTTTTATTAGAAAAGTAGATAAATTGGAGGTAA
TACTAGAGAAATGAAGGCATTTAGGAAGTTATTTCAACAATTTTTGCAGG
AAGGAAGGTATGTAACAGGTCATAATTATGAATTAAAAAAAGGGTACTGC
ATTTAGGAATAACCTGAAAGTATAATAAATACGACCTGGTCATCCATGGC
ATAAGTTAAAAGAACAAACTAAAGATGTTTGTCTGTCTTAGGAAATATTA
TAAAAGCATCTTTATGGAATTAGTTTCGTCTTGGTTATTTTGGTTTAATT
GGCTTGATTCATCATGTGATATATACTGAACAACAGAACATTTGGTTTGA
AAATAAGAACAAACCAAGTGGGACCTTTCTCTGGGGNCATTGCTAGAGAT
TTCTACAGAGTCAGTGCCCTCCCAACTGCCGCTTTCCTTCATCCT

Query= MSMg01no512_i08.g1 MSMg01no512_i08.g1 CHROMAT_FILE:
MSMg01no512_i08.g1 PHD_FILE: MSMg01no512_i08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:42 2005
         (615 letters)



>mm_chr3_125538185_125539200
          Length = 1016

 Score = 1143 bits (591), Expect = 0.0
 Identities = 611/619 (98%), Gaps = 4/619 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtagagctataataggagattggaaacctagactaattggttagcatttagtgtcataa 60
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 198 tgtagagctataataggagattagaaacctagactaattggttagcatttagtgtcataa 257

                                                                       
Query: 61  attagccaggtgctattgcatttagctctagcagcggccatgtaaattagggacttttat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 attagccaggtgctattgcatttagctctagcagcggccatgtaaattagggacttttat 317

                                                                       
Query: 121 tgtgttccattctgacaggtgaggaaaatttaagctcataaagctttaattatcttttct 180
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 318 tgtgttccattctgacaggtgaggaaagtttaagctcataaagctttaattatcttttct 377

                                                                       
Query: 181 cttggactatagtaagtctcaaagctaatatgcaagccgagacatatctgattccagaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cttggactatagtaagtctcaaagctaatatgcaagccgagacatatctgattccagaat 437

                                                                       
Query: 241 ccatgttctt---tttattagaaaagtagataaattggaggtaatactagagaaatgaag 297
           ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ccatgttcttctttttattagaaaagtagataaattggaggtaatactagagaaatgaag 497

                                                                       
Query: 298 gcatttaggaagttatttcaacaatttttgcaggaaggaaggtatgtaacaggtcataat 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gcatttaggaagttatttcaacaatttttgcaggaaggaaggtatgtaacaggtcataat 557

                                                                       
Query: 358 tatgaattaaaaaaa-gggtactgcatttaggaataacctgaaagtataataaatacgac 416
           ||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 558 tatgaataaaaaaaaagggtactgcatttaggaataacctgaaagtataacaaatacgac 617

                                                                       
Query: 417 ctggtcatccatggcataagttaaaagaacaaactaaagatgtttgtctgtcttaggaaa 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ctggtcatccatggcataagttaaaagaacaaactaaagatgtttgtctgtcttaggaaa 677

                                                                       
Query: 477 tattataaaagcatctttatggaattagtttcgtcttggttattttggtttaattggctt 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tattataaaagcatctttatggaattagtttcgtcttggttattttggtttaattggctt 737

                                                                       
Query: 537 gattcatcatgtgatatatactgaacaacagaacatttggtttgaaaataagaacaaacc 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gattcatcatgtgatatatactgaacaacagaacatttggtttgaaaataagaacaaacc 797

                              
Query: 597 aagtgggacctttctctgg 615
           |||||||||||||||||||
Sbjct: 798 aagtgggacctttctctgg 816


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1016
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1006
Effective search space:   608630
Effective search space used:   608630
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)