Query= MSMg01no517_g13.b1 MSMg01no517_g13.b1 CHROMAT_FILE:
MSMg01no517_g13.b1 PHD_FILE: MSMg01no517_g13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:29 2005
(713 letters)
>mm_chr3_137783820_137784933
Length = 1114
Score = 1214 bits (628), Expect = 0.0
Identities = 655/668 (98%), Gaps = 9/668 (1%)
Strand = Plus / Minus
Query: 47 acaccgcacagtcctttccttctcgggacctccaaggtggcaagcttcttgagtccatta 106
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 acaccacacagtcctttccttctcgggacctccaaggtggcaagcttcttgagtccatta 1055
Query: 107 aatattaattgcatttattatcttaaccacaacctatcactttacagtgcctttgccaga 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 aatattaattgcatttattatcttaaccacaacctatcactttacagtgcctttgccaga 995
Query: 167 agctgagtacaaagtcttgttttacacacacacacacacacacacacacatacacacaca 226
||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 994 agctgagtacaaagtcttgttttacacacacacacacacacacac------acacacac- 942
Query: 227 gacacacacacacacacacacacacacaagaactggatgccctcagtgatcaaaggctgg 286
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 -acacacacacacacacacacacacacaagaactggatgccctcagtgatcaaaggctgg 883
Query: 287 aagaagctgccacatcactattttggtgataccagtgtaccaggtcagtgggagctgagg 346
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 882 aagaagctgccacatcactattttggtgacaccagtgtaccaggtcagtgggagctgagg 823
Query: 347 tctgtgatgacctgctgtagccacaggttaaagtacatcattctatatctcttagctgtg 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 tctgtgatgacctgctgtagccacaggttaaagtacatcattctatatctcttagctgtg 763
Query: 407 caataaagggcttggaaaggctctaccctgtagactaagaaggagccaaagggaagttcc 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 caataaagggcttggaaaggctctaccctgtagactaagaaggagccaaagggaagttcc 703
Query: 467 agtcccatcgctgttagaaaggtcactgtcgtttcagattatgaggagagaaactgagaa 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 agtcccatcgctgttagaaaggtcactgtcgtttcagattatgaggagagaaactgagaa 643
Query: 527 agcagagaacgtgctgatggacaattttcttagaggacatttctaccctaagccaaaatt 586
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 agcagagaaagtgctgatggacaattttcttagaggacatttctaccctaagccaaaatt 583
Query: 587 aaattctactcaaaattcttgggatttcaagaaaatc-tttttttttccttccagagccc 645
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 582 aaattctactcaaaattcttgggatttcaagaaaatcttttttttttccttccagagccc 523
Query: 646 tcctttctcctctccgaattcaaagctctcatatttacatcatgaacgaacctaacaaag 705
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tcctttctcctctccgcattcaaagctctcatatttacatcatgaacgaacctaacaaag 463
Query: 706 taacttag 713
||||||||
Sbjct: 462 taacttag 455
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 713
Length of database: 1114
Length adjustment: 10
Effective length of query: 703
Effective length of database: 1104
Effective search space: 776112
Effective search space used: 776112
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no517_g13.g1 MSMg01no517_g13.g1 CHROMAT_FILE:
MSMg01no517_g13.g1 PHD_FILE: MSMg01no517_g13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:29 2005
(201 letters)
>mm_chr3_137707607_137708207
Length = 601
Score = 379 bits (196), Expect = e-110
Identities = 199/200 (99%)
Strand = Plus / Plus
Query: 1 ccacaaagatggtgttttccagtgtcttacagacatttcatacagacagaccttacagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccacaaagatggtgttttccagtgtcttacagacatttcatacagacagaccttacagac 260
Query: 61 tttggagtgcctttcccccaaacatacagggttagagggcaaatctggggaaacagaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttggagtgcctttcccccaaacatacagggttagagggcaaatctggggaaacagaagt 320
Query: 121 atctattgctcatttgcttttgtttgttgtttgttttgttttgttgggtttttgtttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctattgctcatttgcttttgtttgttgtttgttttgttttgttgggtttttgtttttt 380
Query: 181 tgttgttgttgttgttgttg 200
| ||||||||||||||||||
Sbjct: 381 ttttgttgttgttgttgttg 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 601
Length adjustment: 8
Effective length of query: 193
Effective length of database: 593
Effective search space: 114449
Effective search space used: 114449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
