XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACTAT
GTTCATGGACACCACACTAAGCCCTCATCTGATGACACAAGGGTGTCCAG
CCCAGCAGGGGGTGCATCCCCTTTGTCTCGGGGTGGGAAGTAATGTCCAC
TGGAGGGAACACATAGGATTCTGTACAAAATCAGGCTCTCAGCAGTCTTA
TTTATATTAAGTAATTATTCCCTTTTATGCTATCTCATGTAGCACTACTT
TAAATGAAATAACTATTTTATACCACACAGGGAGCCAACCTGACTTCCAT
GGTGGTCTTCATCCTTGCCATGTGTCTCACCATTTGGAGTCATCTGACGT
GTTACTGGGATAAAGGGCTGGTTGTAAGCCTTACTTGGCATATCATATAT
GCTCAGAACGGAGTCTGGGTGCTCAGACTAGCAATTGATATATGGTGCTG
CTGTTTCTTCCACATTCAGAACACACGGGCCCAGATATCTAGATGCAGGG
TTGCAGACTCTAGTAGAAAACTGCCCCATTCCCGGGAACCTGAGAGTACA
AGATGCATACACCTCTTGTTGATGGTGGGCTCACAATGGGATGGTGCGGG
GGAGATGGAGGGTAAGAGGGAAAATTAAGGAAATCTTAATTAAATGTGTA
CTTTAGTTAATAACCATGTTCAGTATGACATCATTAACATTAGCATATGC
ACCACAGAGGAAATTGCTACATGGTGGATGCATACAGACCCTCAAATC

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCT
GAAAAAATGTTCAAAATCCTTAATCATCAGGGAAATGCAAATCAAAACAA
CCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATAAAAAACTCA
GGTGACAGCAGATACTGGCGAGGATGTGGAGAAAGGGGAACACTCCTCCA
TTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGC
GGTTCCTCAGAAAATTGGACAAGTTCTACCGGAGGATCCCGCAATACCTC
TTCTGGACATATATCCAGAAGATGTCCCAACTGGTAAGAAGGACACATGC
TCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGA
ACCCAGATGTCCCTCAACAGAGGAATGGATACAAAAAATGTGGTACATTT
ACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAGTTC
CTAGGCAAATGGATGGACCTGGAGGGAATCATCCTGAGTGAGGTAACACA
ATCACAAAAGAACTCACATGATATGTACTCACTGATAAGTGTATAAGCCC
AGAGACTTAGAATACACAAGATATAAGATACAATTTGTGAAACACATGAA
ACTCTAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAA
TTGGGAACN

Query= MSMg01no519_g14.b1 MSMg01no519_g14.b1 CHROMAT_FILE:
MSMg01no519_g14.b1 PHD_FILE: MSMg01no519_g14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:07 2005
         (713 letters)



>mm_chr3_53632775_53633887
          Length = 1113

 Score = 1355 bits (701), Expect = 0.0
 Identities = 707/709 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcactatgttcatggacaccacactaagccctcatctgatgacacaagggtgtcca 64
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactatggtcatggacaccacactaagccctcatctgatgacacaagggtgtcca 264

                                                                       
Query: 65  gcccagcagggggtgcatcccctttgtctcggggtgggaagtaatgtccactggagggaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcccagcagggggtgcatcccctttgtctcggggtgggaagtaatgtccactggagggaa 324

                                                                       
Query: 125 cacataggattctgtacaaaatcaggctctcagcagtcttatttatattaagtaattatt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cacataggattctgtacaaaatcaggctctcagcagtcttatttatattaagtaattatt 384

                                                                       
Query: 185 cccttttatgctatctcatgtagcactactttaaatgaaataactattttataccacaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cccttttatgctatctcatgtagcactactttaaatgaaataactattttataccacaca 444

                                                                       
Query: 245 gggagccaacctgacttccatggtggtcttcatccttgccatgtgtctcaccatttggag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gggagccaacctgacttccatggtggtcttcatccttgccatgtgtctcaccatttggag 504

                                                                       
Query: 305 tcatctgacgtgttactgggataaagggctggttgtaagccttacttggcatatcatata 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcatctgacgtgttactgggataaagggctggttgtaagccttacttggcatatcatata 564

                                                                       
Query: 365 tgctcagaacggagtctgggtgctcagactagcaattgatatatggtgctgctgtttctt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgctcagaacggagtctgggtgctcagactagcaattgatatatggtgctgctgtttctt 624

                                                                       
Query: 425 ccacattcagaacacacgggcccagatatctagatgcagggttgcagactctagtagaaa 484
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 625 ccacattcagaacacacgggcccagatatctagatgcagggttgcagaatctagtagaaa 684

                                                                       
Query: 485 actgccccattcccgggaacctgagagtacaagatgcatacacctcttgttgatggtggg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 actgccccattcccgggaacctgagagtacaagatgcatacacctcttgttgatggtggg 744

                                                                       
Query: 545 ctcacaatgggatggtgcgggggagatggagggtaagagggaaaattaaggaaatcttaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctcacaatgggatggtgcgggggagatggagggtaagagggaaaattaaggaaatcttaa 804

                                                                       
Query: 605 ttaaatgtgtactttagttaataaccatgttcagtatgacatcattaacattagcatatg 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttaaatgtgtactttagttaataaccatgttcagtatgacatcattaacattagcatatg 864

                                                            
Query: 665 caccacagaggaaattgctacatggtggatgcatacagaccctcaaatc 713
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 caccacagaggaaattgctacatggtggatgcatacagaccctcaaatc 913


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 713
Length of database: 1113
Length adjustment: 10
Effective length of query: 703
Effective length of database: 1103
Effective search space:   775409
Effective search space used:   775409
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)