GACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATGGCTTTTTACAATTGTTATTCTACATATCTATATCTATATT
TTTCTCTCTCTATCATCTATATTTATATCATTTATCTCTCTCTTTATATG
TATACACACACATGCACACATACACACACGGACACACACACACAGAGACA
CAGACACACACACCACCTGTTAAGCCCCTATAATGTAATTTGTATGTATG
TGCTCTCAAGGCTGATTACTTGGTATAATAATCAATTATCATTGAATTAG
AAAAAATCATATTGAGTGAAGTAATCCAGATACAGGAAAGAAAAGGTTTT
ACTCTATCTCATCTGTAGTCTCTTATAGCTCCAAGTCTTCATATGTAAGT
GTACAACTTTGAGTAACACCAGGAACCAGGAAAGTGAAAGAAGGTCCCAG
GCCTAGGGAGTGAGAACAGCAGAGAAGGGAAGGGTAGGTACAAGTGTCTT
CTTCATAAACATGTGGGGCTTGAGTATCTTAGACTTTGGTGACTTTCTGG
CCATTATTGATGTCTTAGGGCATGTAGAAGTTTCACATCTCANAGCTGCA
ATGGCTGGACCTGTGAGCACACTCTAGTTGCTGTCCTGTTCCTACACTCT
GCATTTGGTTGCTGTCTCTTCAGTGGTGGTGATTATGGTTCAAAGTCAGA
GTATGAACATACTTTGGAGGACTCTGTCACTATACTGCTTCCCAGTCCAG
ATATGTAATTTAGA

ACGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCGGTTTAGTTCTATACCTGATTTT
TTTATTGGGTTTTTTGTTTGATTGTTTGTTTGTTTTGGTGGTTAGCTTTT
TGAGTTCTTTATATATTTTGGATATTAGCCCTCTATTGAATGTGGGGTTA
GTGAAGATTTTTTTTTCCCAATCTGTAGGTTGTGAATTTGTCTTCTTGGC
TATGTCCTTTGCCTTACAGAAGCTTTCCAGTTTCATGAGGTCCCATTTAT
GAATTCTTGATCTTAGAGTGTGTGCCATTGGAGTTCTGTTTAGAAAATTT
CCCCCTCTACCAATAAGTTCAAGGCTCTTTCCCATTTTTTTCTTCTCTTA
GATTCAGTGTATCTGGTTTTATGTTGAGGTCCTTAATCCACTTAGACTTG
AGCTCTGTGCCAGGTGGACAAATATGGATCTATTTTCATTTTTCTGCATA
CCAGCAGTCAGTTAGACCAGCACCACTTGTTGAAGATGCTTTCTTTTTTC
CATTGTATATGTTTGGTTTCTTTGTCAAAGGTCAAGTGCCCATGAGTGTG
TGGTTTTATTTTTGGGTCTTCAACTCTATTCCATTAACCAACATGTCTGC
TGCTGTATCAATACCATGCAGTTTTTATCATTACTGCTCTGTAGTAAAGC
TTGAGGTCAGGGGTGGTGATTTCCCCAAGCGGTTCTTTTATTGTTAAGAA
ATATTT

Query= MSMg01no520_i16.b1 MSMg01no520_i16.b1 CHROMAT_FILE:
MSMg01no520_i16.b1 PHD_FILE: MSMg01no520_i16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:37 2005
         (713 letters)



>mm_chr3_8099252_8100364
          Length = 1113

 Score =  853 bits (441), Expect = 0.0
 Identities = 458/464 (98%)
 Strand = Plus / Minus

                                                                        
Query: 250  ttagaaaaaatcatattgagtgaagtaatccagatacaggaaagaaaaggttttactcta 309
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1113 ttagaaaaaatcatattgagtgaagtaatccagatacaggaaaaaaaaggttttactcta 1054

                                                                        
Query: 310  tctcatctgtagtctcttatagctccaagtcttcatatgtaagtgtacaactttgagtaa 369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 tctcatctgtagtctcttatagctccaagtcttcatatgtaagtgtacaactttgagtaa 994

                                                                        
Query: 370  caccaggaaccaggaaagtgaaagaaggtcccaggcctagggagtgagaacagcagagaa 429
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 993  caccaggaaccaggaaagggaaagaaggtcccaggcctagggagtgagaacagcagagaa 934

                                                                        
Query: 430  gggaagggtaggtacaagtgtcttcttcataaacatgtggggcttgagtatcttagactt 489
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933  gggaagggtaggtacaagtgtcttcttcataaacatgtggggcttgagtatcttagactt 874

                                                                        
Query: 490  tggtgactttctggccattattgatgtcttagggcatgtagaagtttcacatctcanagc 549
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 873  tggtgactttctggccattattgatgtcttagggcatgtagaagtttcacatctcaaagc 814

                                                                        
Query: 550  tgcaatggctggacctgtgagcacactctagttgctgtcctgttcctacactctgcattt 609
            |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 813  tgcaatggctggacctttgcgcacactctagttgctgtcctgttcctacactctgcattt 754

                                                                        
Query: 610  ggttgctgtctcttcagtggtggtgattatggttcaaagtcagagtatgaacatactttg 669
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753  ggttgctatctcttcagtggtggtgattatggttcaaagtcagagtatgaacatactttg 694

                                                        
Query: 670  gaggactctgtcactatactgcttcccagtccagatatgtaatt 713
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693  gaggactctgtcactatactgcttcccagtccagatatgtaatt 650


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 713
Length of database: 1113
Length adjustment: 10
Effective length of query: 703
Effective length of database: 1103
Effective search space:   775409
Effective search space used:   775409
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)