Query= MSMg01no521_p17.b1 MSMg01no521_p17.b1 CHROMAT_FILE:
MSMg01no521_p17.b1 PHD_FILE: MSMg01no521_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:28 2005
(644 letters)
>mm_chr3_21274385_21275428
Length = 1044
Score = 1191 bits (616), Expect = 0.0
Identities = 637/644 (98%), Gaps = 1/644 (0%)
Strand = Plus / Minus
Query: 1 aagcctttagatactgacatcagcccagtgagactcatggtaagttttagaactgtaaga 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aagcctttagatactgatatcagcccagtgagactcatggtaagttttagaactgtaaga 619
Query: 61 ataacaattttttcagtgtttttcaagccagaaaagtgtgccaatttggtatggcaaaaa 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ataac-attttttcagtgtttttcaagccagaaaagtgtgccaatttggtatggcaaaaa 560
Query: 121 gaagaaacaactatgataccttaccagatgagggtgaaattcagacatcattgcatagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gaagaaacaactatgataccttaccagatgagggtgaaattcagacatcattgcatagac 500
Query: 181 aaagatttagagtatcaaaactcatatttaacagatccttagcataagggatttccacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aaagatttagagtatcaaaactcatatttaacagatccttagcataagggatttccacaa 440
Query: 241 agcaaaatgtgcaagaatttgttttgaacagaattaaaacttgaaagtgctaagggatgt 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 439 agcaaaatgtgcaagaatttgttttgaacagaattaaaacttaaaagtgctaagggatgt 380
Query: 301 gtttttgactgaagggaaatgaaattaggcttaggggacagaatgaagagaggtctgggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtttttgactgaagggaaatgaaattaggcttaggggacagaatgaagagaggtctgggg 320
Query: 361 atcttgcttatgggtagagtgcttgccaagcacatgtggcaccttgagttcaatttccat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atcttgcttatgggtagagtgcttgccaagcacatgtggcaccttgagttcaatttccat 260
Query: 421 agaagcatgaaagagaagaaggggaaaggggcaggataaacaatccttgttgctgctgtt 480
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 259 agaagcatgaaagagaagaaggggaaaggggcaggataaatgatccttgttgctgctatt 200
Query: 481 ttcactacagtatggtgggagcaacacattttccattcctctgtatccttgacaatcaat 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 199 ttcactacagtatggtgggagcaacacattttccatccctctgtatccttgacaatcaat 140
Query: 541 gtcctttagatgcaatgtgataaatggaaaattaaagcatgaccagatataatccatatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gtcctttagatgcaatgtgataaatggaaaattaaagcatgaccagatataatccatatg 80
Query: 601 taagcatgagaaagctgatatggctatattgcaaagaggacttc 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 taagcatgagaaagctgatatggctatattgcaaagaggacttc 36
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_p17.g1 MSMg01no521_p17.g1 CHROMAT_FILE:
MSMg01no521_p17.g1 PHD_FILE: MSMg01no521_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:28 2005
(567 letters)
>mm_chr3_21070888_21071854
Length = 967
Score = 1073 bits (555), Expect = 0.0
Identities = 564/567 (99%)
Strand = Plus / Plus
Query: 1 attattcattaggactagaatcctacaagtggtgcctgaaggattaatgtagactttaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attattcattaggactagaatcctacaagtggtgcctgaaggattaatgtagactttaga 260
Query: 61 tttaatgccttcacacatcagacaaaatttgggttctgttaaagaagaaagatttggggt 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 tttaatgccttcacacatcagacaaaatttgggttctgttaaagaagaaaaatttggggt 320
Query: 121 tggtagagagcagatactgcatagagtaaaagactccaacatgagaacagaagtcaatta 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 tggtagagagcagatactgcatagagtaaaagactgcaacatgagaacagaagtcaatta 380
Query: 181 aatcaagagatacataatgaggcctgaaaataagtgattccttatgtccaatagaaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatcaagagatacataatgaggcctgaaaataagtgattccttatgtccaatagaaaaaa 440
Query: 241 attatttggcaaccaaataaaaggatcatgagggaaaagatcactcaacagcttaggaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attatttggcaaccaaataaaaggatcatgagggaaaagatcactcaacagcttaggaac 500
Query: 301 actttatattaaccatcctattattctaaatatttggacaatgagaaacaatatcctact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actttatattaaccatcctattattctaaatatttggacaatgagaaacaatatcctact 560
Query: 361 ggcagctattctaatctatgagattctgtgaaggaacccccacttgagatgctgcaatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggcagctattctaatctatgagattctgtgaaggaacccccacttgagatgctgcaatac 620
Query: 421 agcatggagatccacttagacctaaaagaaccttggccttcgggtgatgataaacatatc 480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacatggagatccacttagacctaaaagaaccttggccttcgggtgatgataaacatatc 680
Query: 481 tacatagtcagaacagtcctagatcaagagtagctttgctctgcctagacaatgcacagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tacatagtcagaacagtcctagatcaagagtagctttgctctgcctagacaatgcacagc 740
Query: 541 aagctcatccagaggaattttagagaa 567
|||||||||||||||||||||||||||
Sbjct: 741 aagctcatccagaggaattttagagaa 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
