Query= MSMg01no523_d14.b1 MSMg01no523_d14.b1 CHROMAT_FILE:
MSMg01no523_d14.b1 PHD_FILE: MSMg01no523_d14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:04 2005
(601 letters)
>mm_chr3_150487695_150488695
Length = 1001
Score = 787 bits (407), Expect = 0.0
Identities = 410/411 (99%)
Strand = Plus / Minus
Query: 189 agcttttcaattttatgatcttagataagccattggtgttcttttaaggaaaatttcccc 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 agcttttcaattttatgatcttagataagccattggtgttcttttaaggaaaatttcccc 942
Query: 249 tgtgcccatgtgttcgaggctcttccccactttctcttataccagtttagtgtctctggt 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 tgtgcccatgtgttcgaggctcttccccactttctcttataccagtttagtgtctctggt 882
Query: 309 tttatgtggaggtctatgatccacttggacctgagctttgtaaagggagataagaatggg 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 tttatgtggaggtctatgatccacttggacctgagctttgtaaagggagataagaatggg 822
Query: 369 tcagtttgtattcttctacttgctgatggacttaggtagcaagacgttattaacacttct 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tcagtttgtattcttctacttgctgatggacttaggtagcaagacgttattaacacttct 762
Query: 429 ccaggctatctgtggtcttacttctgcactgatttgctctttagttgctaagcatccttt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 ccaggctatctgtggtcttacttctgcactgatttgctctttagttgctaagcatccttt 702
Query: 489 aactttctttctgaattaaaataattcacgttattcttccaacttcacttttccctcaga 548
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 agctttctttctgaattaaaataattcacgttattcttccaacttcacttttccctcaga 642
Query: 549 tattatttttgtcataaaatactctttctcattgtttctttcatttgctag 599
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 tattatttttgtcataaaatactctttctcattgtttctttcatttgctag 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space: 585681
Effective search space used: 585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_d14.g1 MSMg01no523_d14.g1 CHROMAT_FILE:
MSMg01no523_d14.g1 PHD_FILE: MSMg01no523_d14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:04 2005
(555 letters)
>mm_chr3_150360463_150361414
Length = 952
Score = 1004 bits (519), Expect = 0.0
Identities = 545/555 (98%), Gaps = 3/555 (0%)
Strand = Plus / Plus
Query: 1 acatgaaacctacagtgagtccaaaacggaaatccagctcagcagctgatgtgatggttt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 acatgaaacctacagtgagtccaaaacagaaatccagctcagcagctgatgtgatggttt 260
Query: 61 tctcatcctatgaggggtacagaggtagaggttgttgcagtgttgggatcattggtaaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcatcctatgaggggtacagaggtagaggttgttgcagtgttgggatcattggtaaaa 320
Query: 121 agaaacattatgacagcatgtggacttggtggctattgctgctggtggcaccaaatcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaacattatgacagcatgtggacttggtggctattgctgctggtggcaccaaatcagt 380
Query: 181 ggctgcaagctgctgtcttcaatttcctgggtgattagtacgcaggaagctatttttgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctgcaagctgctgtcttcaatttcctgggtgattagtacgcaggaagctatttttgag 440
Query: 241 cccaagtccaggcagaggcaagcatctccctaggtgttggttcctgaggctatagcctca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccaagtccaggcagaggcaagcatctccctaggtgttggttcctgaggctatagcctca 500
Query: 301 ggtacctcaactgagcactttccagggtacagcgtgcagggttcctttcaagctgcagga 360
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 ggtacctcaactgaacactttccagggtacagcatgcagggttcctttcaagctgcagga 560
Query: 361 agctgccactgctcagcatgagttacagaacagctcatactcttgactgcaggtactagg 420
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agctgccattgctcagcatgagttacagaacagctcatactcttgactgcaggtactagc 620
Query: 421 gattttggctttctgtagataaagactgggagagagcacaacaattgggtggttctgacc 480
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 621 gattttggctttctgtagataaagactgggagagagcacaa---ttggctggttctgacc 677
Query: 481 tttgtcaaatataaatcttacttcatctgaaaacaattgttcttatgttcactccacatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tttgtcaaatataaatcttacttcatctgaaaacaattgttcttatgttcactccacatt 737
Query: 541 atcccaaatatgggc 555
|||||||||||||||
Sbjct: 738 atcccaaatatgggc 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 952
Length adjustment: 10
Effective length of query: 545
Effective length of database: 942
Effective search space: 513390
Effective search space used: 513390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
