Query= MSMg01no524_c15.b1 MSMg01no524_c15.b1 CHROMAT_FILE:
MSMg01no524_c15.b1 PHD_FILE: MSMg01no524_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:21 2005
(686 letters)
>mm_chr3_60161527_60162612
Length = 1086
Score = 1236 bits (639), Expect = 0.0
Identities = 668/678 (98%)
Strand = Plus / Plus
Query: 9 tcactaaagctataattcatgattacagtttattataaagaacaactcgttaaaatgagc 68
|||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 209 tcactaaagctataattcatgattacagtttattataatgaaaaactggttaaaatgagc 268
Query: 69 caaggggaagaaacacataggcaagtgtctggaagaaatcttaatgtgaagaaagttcag 128
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 269 caaggggaagaaacacataggcaagtgtctggaagagatcttaatgtgaagaaagttcag 328
Query: 129 atattatcagaatgtctcattctcctagcaaaaggaagaggcagtataaattgagcattc 188
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 329 atattatcagaatgtctcattctcctagcaaaacgaagaggcagtataaattgagcattc 388
Query: 189 tgaacccaaggagacttgcctgtgcttaaattatggttttgaggactttacattgacaat 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgaacccaaggagacttgcctgtgcttaaattatggttttgaggactttacattgacaat 448
Query: 249 gtgttaatgattgattggctcactaaactcagtcctgagttgcccacattctggggggtc 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gtgttaatgattgattggctcactaaactcagtcctgagttgcccacattctggggggtc 508
Query: 309 tagctgatatcatgctacccaaaagtctaccataaattacctcattagtgataaaagcag 368
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 509 tagctgatatcatgctacccaaaactctaccataaattacctcattagtgataatatcag 568
Query: 369 atgtgctccaggaggcccaccctgaataagaaaggtcctcctatcactggagaaacacaa 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 atgtgctccaggaggcccaccctgaataagaaaggtcctcctatcactggagaaacacaa 628
Query: 429 agatactccagcaagatgactcagtggcacagtactttcaaggaagcctgacaacatgag 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 agatactccagcaagatgactcagtggcacagtactttcaaggaagcctgacaacatgag 688
Query: 489 ttcatctgctggaatccacatggtggaagggaagaaccaattcctacactgtagtgtgta 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ttcatctgctggaatccacatggtggaagggaagaaccaattcctacactgtagtgtgta 748
Query: 549 catgcacaaacatgtgcacacactgaatacatttaaatcctgtattttgaaatttatcat 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 catgcacaaacatgtgcacacactgaatacatttaaatcctgtattttgaaatttatcat 808
Query: 609 gcttgtagaanaggacttaaatttttgaaaggagattttaaaaggaaattttaaatggaa 668
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 809 gcttgtagaaaaggacttaaatttttgaaaggagattttaaaaggaaattttgaatggaa 868
Query: 669 atgtaaaatgaaattcag 686
||||||||||||||||||
Sbjct: 869 atgtaaaatgaaattcag 886
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_c15.g1 MSMg01no524_c15.g1 CHROMAT_FILE:
MSMg01no524_c15.g1 PHD_FILE: MSMg01no524_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:21 2005
(630 letters)
>mm_chr3_60319326_60320355
Length = 1030
Score = 1176 bits (608), Expect = 0.0
Identities = 625/632 (98%), Gaps = 4/632 (0%)
Strand = Plus / Minus
Query: 1 atccttcccaacatccaa--cccaagggctgagcagctgcgccatcccactgagtatcta 58
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 830 atccttcccaacatccaacccccaagggctgagcagctgcgtcatcccactgagtatcta 771
Query: 59 agggttaaaagtaaaacacagcacagggtaggaaaaaaaaaatcttattaagtaagtcgg 118
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 770 agggttaaaagtaaaacacagcacagggtagg--aaaaaaaatcttattaaataagtcgg 713
Query: 119 attcttgtcttaacttcctagaaatcttgctttagttgcagcagagtggagataaattta 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 attcttgtcttaacttcctagaaatcttgctttagttgcagcagagtggagataaattta 653
Query: 179 atgcttggtttcatctcaactgctctagtcatatcttcccttctaaccagttgttctttt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 atgcttggtttcatctcaactgctctagtcatatcttcccttctaaccagttgttctttt 593
Query: 239 acagttgtgtttgatgcacactttactgtagtaagccaacgcgatttttaaaattgcttt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 acagttgtgtttgatgcacactttactgtagtaagccaacgcgatttttaaaattgcttt 533
Query: 299 tgttttgatgaagtgcatcatatataaataaaactaaagcaaactctgacctgtttataa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgttttgatgaagtgcatcatatataaataaaactaaagcaaactctgacctgtttataa 473
Query: 359 aactggaggtgaataacaaacttttaaaagttaagagaatttaaaagtcatcaattaagt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aactggaggtgaataacaaacttttaaaagttaagagaatttaaaagtcatcaattaagt 413
Query: 419 aaatctcattactctataaatatttcaatgagagtcataaccaattagagcacaataccc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aaatctcattactctataaatatttcaatgagagtcataaccaattagagcacaataccc 353
Query: 479 agttactgaaactggcaattgctctgaactctacagtccctgggttcagcaatctatgtg 538
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agttactgaaattggcaattgctctgaactctacagtccctgggttcagcaatctatgtg 293
Query: 539 ttcacccagctatctagtttgaccttccctgtgaatcagcactgctactctgatgccaaa 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ttcacccagctatctagtttgaccttccctgtgaatcagcactgctactctgatgccaaa 233
Query: 599 atgaccttctgaaacttacaaagcttccaagg 630
||||||||||||||||||||||||||||||||
Sbjct: 232 atgaccttctgaaacttacaaagcttccaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
