XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
AAGGCCATACTGGTCTGCAAAGTGAGTTCCAGGACAGCCAGGGCTATACA
GAGAAACCCTGTCTCAAAAAAAACCAAAAAAGAGTAAAGTTGAAAAGGGC
ATGAGATCTTTGGCAGATTTCTCATCCTCCATGTTTCTCTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTTAGTTGATTGTTTGTGGGGTTTTTTTTCTTTG
TTTGTTTTTGCTTTTCTCTGCTCTGTAGTGCTATCTGGCTGTCCTGTTAC
TCTTTATGCCCTGCTGGTTTTCCTTGAACTCTTATAGATTATGTTGCCTC
TGCCTCTTTTTTGTCTTCGAGAGGGATCAATAAACACTATCCTTTCCCTT
ATTGTTTGCTCTCTGCGTATTTTTTATTCTAGGGTCTATTCTTTCCTTTG
CCACCTACTATTCTATTTTCTTTGTATATAGTATTGAGGCCGGTTCAGTG
GTCCTGTATATTCTATTTGTTTTTTCATCCTCCTTTTCCGCGATCCCACC
TAATCTCTTTATACCATCTCTTCCTTTAGTATCTATTTCGCCCCTTCCCT
CTGTTAACTCCTTTCCGCCGTTTTAATTTCCTGTTGCTCTTCGCTTTCCA
AATGGCCGTCCTTTAATCTCCCGAGCGTACCATTTCGGTTTCCCCCCTCT
TTTTTTTCCCCTTATTATCACTTCATTCGGGTCTGCATTCTTTTTTTCCC
CGGGTCCTCCCTCGCTTTTTCCTCTCTTATTCCCCCCTCCTTTCTCCTCC
TTCTTTTCCG

CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAAGGACAAATCTGAGAGCAGCCTGGGTGTGG
GTGGATTCTTCAGGCCACTGAACATCAGGCTATTTATTACATGGCCTAAG
TAACTATTAGACAAGGTAAAGGAGAAAGCAGGGGGCACACATGTGAGGGT
TACTGTAGCTTTTCTGTAAATTTCAAAATAAAATGTTAAAAATAAACCTG
GTTGGATGTTCTGTTTCTTCTACTTGCATGCTGACAAGAAATGGAAAATA
AGCCAGTTTTCATGGATGGGGAAAGAAAAGCATCTTGGGTGGTAAGGATT
TTCATCATACTTACTTTAAAAATAAAATTCTCATATAGAAACTTCCTTGA
AGTCCAACTTCAAGCTGTTGAGAGTGGGAGAAACTTCATAACTAAATCCC
AAGATCATATTTTGCATGGGTGTAGAGGATTAAGAAGGTTGTTCTAAGGT
AGGCGTGGTGGTGCATATCTTCAGTCCTGGCATTTGTGTTGTAGAGACAG
TGTGACCAGGAGTTCAAGGCCAGCCTCTACAGCAAATTCAAGGTTAGCCC
CAGGCTACATGAAAACCAGACTGAGCTGGGCGTGGTGGCGCACGCCTTTA
ATCCGCAGCACTTGGGAGTCAGAGGCATGCGGATTTCTGAGTTCCGAGGC
CAGCCTGGACTACAGAGTGAGGTTCATGACAGCCATGGCTTTACAGAA

Query= MSMg01no525_n03.g1 MSMg01no525_n03.g1 CHROMAT_FILE:
MSMg01no525_n03.g1 PHD_FILE: MSMg01no525_n03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:33 2005
         (574 letters)



>mm_chr3_116366697_116367670
          Length = 974

 Score = 1094 bits (566), Expect = 0.0
 Identities = 572/574 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaggacaaatctgagagcagcctgggtgtgggtggattcttcaggccactgaacatcagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggacaaatctgagagcagcctgggtgtgggtggattcttcaggccactgaacatcagg 260

                                                                       
Query: 61  ctatttattacatggcctaagtaactattagacaaggtaaaggagaaagcagggggcaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatttattacatggcctaagtaactattagacaaggtaaaggagaaagcagggggcaca 320

                                                                       
Query: 121 catgtgagggttactgtagcttttctgtaaatttcaaaataaaatgttaaaaataaacct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgtgagggttactgtagcttttctgtaaatttcaaaataaaatgttaaaaataaacct 380

                                                                       
Query: 181 ggttggatgttctgtttcttctacttgcatgctgacaagaaatggaaaataagccagttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggttggatgttctgtttcttctacttgcatgctgacaagaaatggaaaataagccagttt 440

                                                                       
Query: 241 tcatggatggggaaagaaaagcatcttgggtggtaaggattttcatcatacttactttaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcatggatggggaaagaaaagcatcttgggtggtaaggattttcatcatacttactttaa 500

                                                                       
Query: 301 aaataaaattctcatatagaaacttccttgaagtccaacttcaagctgttgagagtggga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaataaaattctcatatagaaacttccttgaagtccaacttcaagctgttgagagtggga 560

                                                                       
Query: 361 gaaacttcataactaaatcccaagatcatattttgcatgggtgtagaggattaagaaggt 420
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaacttcataactaaatcccgagatcatattttgcatgggtgtagaggattaagaaggt 620

                                                                       
Query: 421 tgttctaaggtaggcgtggtggtgcatatcttcagtcctggcatttgtgttgtagagaca 480
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 tgttctaaggtaggcgtggtggtgcatatcttcggtcctggcatttgtgttgtagagaca 680

                                                                       
Query: 481 gtgtgaccaggagttcaaggccagcctctacagcaaattcaaggttagccccaggctaca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgtgaccaggagttcaaggccagcctctacagcaaattcaaggttagccccaggctaca 740

                                             
Query: 541 tgaaaaccagactgagctgggcgtggtggcgcac 574
           ||||||||||||||||||||||||||||||||||
Sbjct: 741 tgaaaaccagactgagctgggcgtggtggcgcac 774


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space:   543696
Effective search space used:   543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)