CCCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGCG
GAATTCAGGGATGGTTTCAAATATATAAACCAATAAATGTAATCCACCAT
GCTAAATGATAGAAAACACAGGATCATGTCATTAGATACAGAAAAGTTCT
TTAACAAAAATCTACCGTCTATTATGATAAAGCTTTTGAAGAGAATTTGG
ATACAGGGGACATATTTCAACATAACCCAGGCAATATACAATATACAAGG
CACCCACATCTAGCCTTATCCTAAATGGAGAAAAACACGAAGTATGCTTC
TAAAATCAGGAGCAAGACAAGGATGTCCAAGATTGGTGGCCCCACTCCTG
TTTAACATATTTCCTAAAGTCTTAGCTAGACCAAGAAGATAAGTAAACAA
GATAAACAGGATAAAATAGAAAGAGAAAATCTCCAAGTATCCCTATTTTC
AGATGATATGATTCATACATAAGAGACCATAAAAATATACAAAGGTATTC
CTAGAGCTGATAAACACATTCAGCAGAATACAAAATTAACACATAAAATT
AATCAGTATTGACAGAATGAACACTATATATATATAACACTATATACATA
TATATATAAAACACTATATATTTATATATATATATATAAAGAGGCCATAA
ATTTGAAATTTTGAAAATTGAAAATTTGAAAAACAGCAAGGAAATATATA
TGGAGGGTTGGTGGGAGGAAGGTGAATAGAGCAGTGATGTAATTTTATTC
TTTCTAAAAGTAATA

CATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTCCTGAGATTATTATTGACCTCTGA
GGTCTATGACCAGAGAAAGCAGGCTTCAGATGAGGTAATGACCCTTAATG
AAAGCGGGCCATCCTTCTGGCTCACACTTATAGGTCATCAACACAGGAAA
GGGTTGTATGTAGCTTGTCTTAGAGGACGAAGGGGCAACTGACTAGTAGT
CAGATTTATATATGCCTTACATTTATGACTGCTTTTCTTAGACAGCAAAC
TCATTTAAAACTTTATTAGTGTGACAAGTTATGTGTGCCATGGGTTTTCC
AGTTCTCATAATGATCGCTCCATCTGAGGATTTTATTTGGTCACATTCTG
AAGCCTTTGGATGACTAATGTGAGGCTAGTTCAAAGAATCAGCTGGATGC
TGAAGTGCTCTTGCGTGAGTGGACATCACAAACCACAGCCCCTTGGATTC
TTATTTAGACAACAGATGACTTCAGGGTACTCGTTTAAACCTGAATTTGC
ATTTACCAGTCCTGAGAGCCAAGCAGTGCTCTCTCTCATGCTCAAATATT
AGGAAGAGGCATAGCCAGAACTGAACACAGATAGTTTGGGCTTCTTGCTT
TATTTCCTTTCCTCCTCCTCTCCTCCTCCTCCTTTCCCTCCTCCTCTCCC
TCTTCCTCCTCTTTCTCTTCCCCTTTCTCCCCATCTTCTTTCTTTTCTTT
CTCTTCCTCTTTCTCTTCCTCCTCCCCTCC

Query= MSMg01no530_o05.g1 MSMg01no530_o05.g1 CHROMAT_FILE:
MSMg01no530_o05.g1 PHD_FILE: MSMg01no530_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:21 2005
         (679 letters)



>mm_chr3_28983490_28984568
          Length = 1079

 Score = 1266 bits (655), Expect = 0.0
 Identities = 673/679 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcctgagattattattgacctctgaggtctatgaccagagaaagcaggcttcagatgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcctgagattattattgacctctgaggtctatgaccagagaaagcaggcttcagatgag 260

                                                                       
Query: 61  gtaatgacccttaatgaaagcgggccatccttctggctcacacttataggtcatcaacac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaatgacccttaatgaaagcgggccatccttctggctcacacttataggtcatcaacac 320

                                                                       
Query: 121 aggaaagggttgtatgtagcttgtcttagaggacgaaggggcaactgactagtagtcaga 180
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaaagagttgtatgtagcttgtcttagaggacgaaggggcaactgactagtagtcaga 380

                                                                       
Query: 181 tttatatatgccttacatttatgactgcttttcttagacagcaaactcatttaaaacttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttatatatgccttacatttatgactgcttttcttagacagcaaactcatttaaaacttt 440

                                                                       
Query: 241 attagtgtgacaagttatgtgtgccatgggttttccagttctcataatgatcgctccatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attagtgtgacaagttatgtgtgccatgggttttccagttctcataatgatcgctccatc 500

                                                                       
Query: 301 tgaggattttatttggtcacattctgaagcctttggatgactaatgtgaggctagttcaa 360
           |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaggattttgtttggacacattctgaagcctttggatgactaatgtgaggctagttcaa 560

                                                                       
Query: 361 agaatcagctggatgctgaagtgctcttgcgtgagtggacatcacaaaccacagcccctt 420
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaatcagccggatgctgaagtgctcttgcgtgagtggacatcacaaaccacagcccctt 620

                                                                       
Query: 421 ggattcttatttagacaacagatgacttcagggtactcgtttaaacctgaatttgcattt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggattcttatttagacaacagatgacttcagggtactcgtttaaacctgaatttgcattt 680

                                                                       
Query: 481 accagtcctgagagccaagcagtgctctctctcatgctcaaatattaggaagaggcatag 540
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 681 accagtcctgagagccaagcagtgctctctctcatgctcaaaaattaggaagaggcatag 740

                                                                       
Query: 541 ccagaactgaacacagatagtttgggcttcttgctttatttcctttcctcctcctctcct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccagaactgaacacagatagtttgggcttcttgctttatttcctttcctcctcctctcct 800

                                                                       
Query: 601 cctcctcctttccctcctcctctccctcttcctcctctttctcttcccctttctccccat 660
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 801 cctcctcctttccctcctcctctccctcctcctcctctttctcttcccctttctccccat 860

                              
Query: 661 cttctttcttttctttctc 679
           |||||||||||||||||||
Sbjct: 861 cttctttcttttctttctc 879


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space:   715161
Effective search space used:   715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)