CCCTCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTGGAGATTTCTATCTAAGTGAACAGGAACTACGGACAAA
AGCGTCACAAACAGAGTATAAAAATGTGAAGAATATCTTTGGCATAGAAG
ATACAATAGGGACTCGAGCACCAGGGTGCCTCGCCAGCGGAGTCTCCCAA
CACCCGCAGGGGCCCACATAGGATTCCCCGCAGGATCCTAAGACCTCTGG
TGAGTGGAACACAGCATCTGCCCCAATCCAATCGTGCGGAACCTGAGACT
GTGGTAACTAGGGAAGCAGACGACCCGGGCCTGACCTGGGGCACAAATCA
CTTCTGCTCCACTCGAGCACCGGGGTGCCTTGCCAGGAGAGTCTCCCGAC
ACCCAGAGGGGCCCAAACAGGATTCCCCACGGGATCCTAAGACCTCTGTT
GAGTGGAACACAACTTCTGCCAGGAGGCAGGTTCAAACACCAGATATCTG
GGCACCTTCCCTGCAAGAAGAGACCTTGACTGCAAAGAATACTCTGAACA
CTGATACTAAGGAGAGAGCTAGCCTTCTAGGTCTGCTTATAGAGGCTAAC
AGAGTCATCTGAGGAATAAGCTCTAACCCTAGACAACTATTACAGCTAGC
TTCCGAGATTACCTGATGGCTGAAAGGCGAATGTTAGATTCCTACTATCT
GAATCCAAGACCACTCTCCAATCTCTGAACGCATCTACTCCCACC

TTCCTCCAATGATTTGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATTAAAAAAAATTTCATC
TTCTAACACAGGTTGCAAGTTGAATAAGCTGAAAGCAAAGACTGTTCATC
TATCAAGTAAGAAGCTAAAAGGTGGCCCTAAATTCTAGAAATCTGGTGAT
CTCTAGATATTGAAATGGTCCCAGCAAGTCCATATGTAGAAATCTTCTCT
GACTGCTCTCTGGGTTGATTTGCTATTTTTTGGTAGGACAAATTGTTGCA
TGAGTATGATTGAAGCCATAGACAAGAAGGCTGCTGGAACTGGCAAGGTC
ACCAAGTCTGCCCTTCAAAAAAGTTCAGAAGCCAATGTGAGTATTATTCC
TAACCTCTGGGCTTTAATCAGAAGCAAGGTCTCCATTTCTGTATTTGCCA
GGCACTAGCATAGCCTTACAAGAGATAGCTATATCAGGGTCCTATCATCA
AAATCTGATGCTCACAGTCATCTTTTGGAAGGAACACAGGGCCCCCAATG
AAGGAGCTAGTGAAAGTACCCATGGAGCTAAAGGGGTCTGCAACCCTATA
GGAGGAAAAACAACAGAACTAATCTGTACCCCCCAGGGCTTGTGTCTCTA
GCTGCATACGTAGCATAGGATGGCCTAGCACGCCATCCCTGGACGGATAG
GTCGTTGGTTTTGCAAAGATTATATGCCCCAGTACCATGGCCAGGAATGT
CATGG

Query= MSMg01no531_d03.g1 MSMg01no531_d03.g1 CHROMAT_FILE:
MSMg01no531_d03.g1 PHD_FILE: MSMg01no531_d03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:45 2005
         (534 letters)



>mm_chr3_78489191_78490125
          Length = 935

 Score =  990 bits (512), Expect = 0.0
 Identities = 530/538 (98%), Gaps = 4/538 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aattaaaaa----aaatttcatcttctaacacaggttgcaagttgaataagctgaaagca 56
           |||||||||    ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 558 aattaaaaaaaagaaatttcatcttctaacacaggttgcaagtttaataagctgaaagca 499

                                                                       
Query: 57  aagactgttcatctatcaagtaagaagctaaaaggtggccctaaattctagaaatctggt 116
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aagactgttcatttatcaagtaagaagctaaaaggtggccctaaattctagaaatctggt 439

                                                                       
Query: 117 gatctctagatattgaaatggtcccagcaagtccatatgtagaaatcttctctgactgct 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gatctctagatattgaaatggtcccagcaagtccatatgtagaaatcttctctgactgct 379

                                                                       
Query: 177 ctctgggttgatttgctattttttggtaggacaaattgttgcatgagtatgattgaagcc 236
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctctgggttgttttgctattttttggtaggacaaattgttgcatgagtatgattgaagcc 319

                                                                       
Query: 237 atagacaagaaggctgctggaactggcaaggtcaccaagtctgcccttcaaaaaagttca 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atagacaagaaggctgctggaactggcaaggtcaccaagtctgcccttcaaaaaagttca 259

                                                                       
Query: 297 gaagccaatgtgagtattattcctaacctctgggctttaatcagaagcaaggtctccatt 356
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 258 gaagccaatgtgagtattattcctaacctctgggctttaatcagaagcaaggtctccact 199

                                                                       
Query: 357 tctgtatttgccaggcactagcatagccttacaagagatagctatatcagggtcctatca 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tctgtatttgccaggcactagcatagccttacaagagatagctatatcagggtcctatca 139

                                                                       
Query: 417 tcaaaatctgatgctcacagtcatcttttggaaggaacacagggcccccaatgaaggagc 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tcaaaatctgatgctcacagtcatcttttggaaggaacacagggcccccaatgaaggagc 79

                                                                     
Query: 477 tagtgaaagtacccatggagctaaaggggtctgcaaccctataggaggaaaaacaaca 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  tagtgaaagtacccatggagctaaaggggtctgcaaccctataggaggaaaaacaaca 21


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 935
Length adjustment: 10
Effective length of query: 524
Effective length of database: 925
Effective search space:   484700
Effective search space used:   484700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)