Query= MSMg01no531_f08.b1 MSMg01no531_f08.b1 CHROMAT_FILE:
MSMg01no531_f08.b1 PHD_FILE: MSMg01no531_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:55 2005
(673 letters)
>mm_chr3_119831005_119832077
Length = 1073
Score = 1239 bits (641), Expect = 0.0
Identities = 665/677 (98%), Gaps = 8/677 (1%)
Strand = Plus / Plus
Query: 5 gaattctgac-attatatttagctggactcatgatactatgtggaactaaatctcacatt 63
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gaattctgacaaatatatttagctggactcatgatactatgtggaactaaatctcacatt 256
Query: 64 tctgccctttatc-------tttttttttttaattttgtgttgtggtaagagccattttt 116
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tctgcccttcatcttttttttttttttttttaattttgtgttgtggtaagagccattttt 316
Query: 117 acttacttcttttctttttaggttttaccttttacttttaagtgtttatgagtgggtctg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 acttacttcttttctttttaggttttaccttttacttttaagtgtttatgagtgggtctg 376
Query: 177 agtgtaggtttgtgcaaatgaatgcagtggcatggaaggcagaggatgaagatagctctc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agtgtaggtttgtgcaaatgaatgcagtggcatggaaggcagaggatgaagatagctctc 436
Query: 237 ctgcaactgaagttaaaggcaggtgggagctgccctacacagacactaacaatggaactc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctgcaactgaagttaaaggcaggtgggagctgccctacacagacactaacaatggaactc 496
Query: 297 tagttccctgtaaggacagtgttcatgcgtaaccccagtcccaggggaagcaacttaatg 356
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 497 tagttccctgtaaggacagtgttcatgcgtaaccccaggcccaggggaagcaacttaatg 556
Query: 357 aaggctcacagttctcagttacagtccttcatcatgcaacagacaagatcttagggcagt 416
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 557 aaggctcacagttctcagttacagtccttcatcgtgcaacagacaagatcttagggcagt 616
Query: 417 tgcctgcattgcagccccagagagaaaacagggagatgaatgctccacctcaactcaatg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tgcctgcattgcagccccagagagaaaacagggagatgaatgctccacctcaactcaatg 676
Query: 477 tctcctttttatacagcgctagtcacaaactgtggaatggtgcctcccacacctgaggta 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tctcctttttatacagcgctagtcacaaactgtggaatggtgcctcccacacctgaggta 736
Query: 537 gatttttctcaccttggttaatctagtctagtctctcacaagtatttcagcatgttaact 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gatttttctcaccttggttaatctagtctagtctctcacaagtatttcagcatgttaact 796
Query: 597 ttttctagatgtctaggagcaggtatcctaggtaacttgtaaattctatcaaaatgacag 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ttttctagatgtctaggagcaggtatcctaggtaacttgtaaattctatcaaaatgacag 856
Query: 657 taaatctaaaccatttc 673
|||||||||||||||||
Sbjct: 857 taaatctaaaccatttc 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_f08.g1 MSMg01no531_f08.g1 CHROMAT_FILE:
MSMg01no531_f08.g1 PHD_FILE: MSMg01no531_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:55 2005
(650 letters)
>mm_chr3_119948726_119949775
Length = 1050
Score = 1064 bits (550), Expect = 0.0
Identities = 556/558 (99%)
Strand = Plus / Minus
Query: 1 acatattaaaaaaaaataacatcttgctatccttactgtttaaagtacaatgctcagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 acatattaaaaaaaaataacatcttgctatccttactgtttaaagtacaatgctcagaac 499
Query: 61 ttaataaaacacagattttcaaataggtatttgcattacacaaattggaactcctgtctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttaataaaacacagattttcaaataggtatttgcattacacaaattggaactcctgtctt 439
Query: 121 gcatgttcacctttagtagtaatgaagacataaataatgatgacataaggttttatgcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gcatgttcacctttagtagtaatgaagacataaataatgatgacataaggttttatgcta 379
Query: 181 taatttcagagtgcctttgctttgttctgtatgtatttatttctttgcataaacaagtgt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caatttcagagtgcctttgctttgttctgtatgtatttatttctttgcataaacaagtgt 319
Query: 241 ggcttttaatgttggaatatattctggaaaaaataaagtccttcatgctcgactgaattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ggcttttaatgttggaatatattctggaaaaaataaagtccttcatgctcgactgaattg 259
Query: 301 taacttaataacctgcttcaaaacctttgaaagatttagaaccatttagtctgcaatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 taacttaataacctgcttcaaaacctttgaaagatttagaaccatttagtctgcaatgct 199
Query: 361 atcacaaggaagtgataacggatgcattacacatttacgtgcaacatgtcactacatttc 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atgacaaggaagtgataacggatgcattacacatttacgtgcaacatgtcactacatttc 139
Query: 421 aatatgaaaaaagcaaataaaacttaaatgactggagacaacaggttgattcaataagtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 aatatgaaaaaagcaaataaaacttaaatgactggagacaacaggttgattcaataagtg 79
Query: 481 gtgacttatctgtacactaaaattctatgcaataattaatgactatggcctgaagcaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 gtgacttatctgtacactaaaattctatgcaataattaatgactatggcctgaagcaaac 19
Query: 541 ttaattaatatgaaagta 558
||||||||||||||||||
Sbjct: 18 ttaattaatatgaaagta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
