Query= MSMg01no533_b23.b1 MSMg01no533_b23.b1 CHROMAT_FILE:
MSMg01no533_b23.b1 PHD_FILE: MSMg01no533_b23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:15 2005
(188 letters)
>mm_chr3_154514557_154515144
Length = 588
Score = 356 bits (184), Expect = e-103
Identities = 184/184 (100%)
Strand = Plus / Plus
Query: 5 gaattcatagtcagctatagctcagaaattgaagatggagcctggattatgctccctgtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatagtcagctatagctcagaaattgaagatggagcctggattatgctccctgtt 264
Query: 65 gttgaatgaataggttccttcaaggaatggaatgatgagaacgttgtttgcctagtcctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttgaatgaataggttccttcaaggaatggaatgatgagaacgttgtttgcctagtcctg 324
Query: 125 gaaaatcaaccaaagacttaaaaagtctcaaagaaatgaaacgttcaacatgaagagaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaaaatcaaccaaagacttaaaaagtctcaaagaaatgaaacgttcaacatgaagagaac 384
Query: 185 attt 188
||||
Sbjct: 385 attt 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no533_b23.g1 MSMg01no533_b23.g1 CHROMAT_FILE:
MSMg01no533_b23.g1 PHD_FILE: MSMg01no533_b23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:15 2005
(586 letters)
>mm_chr3_154691215_154692199
Length = 985
Score = 1050 bits (543), Expect = 0.0
Identities = 576/587 (98%), Gaps = 3/587 (0%)
Strand = Plus / Minus
Query: 1 tggtcatcggattcaaagtcccaccactttcatattctgctaagacgcacccgcttacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 tggtcatcggattcaaagtcccaccactttcatattctgctaagacgcacccgcttacga 726
Query: 61 aactcattagagtaataagtagcagctttccacctcctcattaaatagttatttttgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 aactcattagagtaataagtagcagctttccacctcctcattaaatagttatttttgaaa 666
Query: 121 tgtttcatatccagaatccaactctacctttcctcatctctcaaacaagtgtgaacagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tgtttcatatccagaatccaactctacctttcctcatctctcaaacaagtgtgaacagag 606
Query: 181 acacaaataaagccatctgtaaattctatgaaatacatttgagctatgtttcctaatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 acacaaataaagccatctgtaaattctatgaaatacatttgagctatgtttcctaatgat 546
Query: 241 gtcactcctcaggtccttactggtaacagtatcatgctgagaacaaaaggttttccttta 300
| |||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||
Sbjct: 545 gccactcctcaggtccttactggtaacagtattatgttgagaagaaaaggttttccttta 486
Query: 301 ttttattgtttctcattactacaaaatcttactcactacaaaattaatatacatatccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 485 ttttattgtttctcattactacaaaatcttactcactacaaaattaatatagatatccag 426
Query: 361 agacattgttgtaaatatatagcatcagtttgcactgtttatggggaaaga-caaaaatc 419
||||| ||||||||| ||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 425 -gacatggttgtaaatgtatagcatcagtttgcactgtttatggggaa-gaacaaaaatc 368
Query: 420 tcagtaaagcaacataaaaagtgttttcttctttcctattgaaagtataaaatctcaact 479
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tcagtaaagcaacataaaaagggttttcttctttcctattgaaagtataaaatctcaact 308
Query: 480 agaaccataaatattaagaaatcctagtagaagaactggtgaatggctgccacactcctc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agaaccataaatattaagaaatcctagtagaagaactggtgaatggctgccacactcctc 248
Query: 540 tgaagaatgcccaatctttagtgagctgatgtatatgcaagtgatgt 586
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgaagaatgcccaatctttagtgagctgatgtatatgcaagtgatgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 985
Length adjustment: 10
Effective length of query: 576
Effective length of database: 975
Effective search space: 561600
Effective search space used: 561600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
