Query= MSMg01no533_c10.b1 MSMg01no533_c10.b1 CHROMAT_FILE:
MSMg01no533_c10.b1 PHD_FILE: MSMg01no533_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:17 2005
(619 letters)
>mm_chr3_112013164_112014182
Length = 1019
Score = 1158 bits (599), Expect = 0.0
Identities = 611/615 (99%)
Strand = Plus / Plus
Query: 5 gaattcttttattatatctgatgctctttatatatcattaaaatagttactagtaatgat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttttattatatctgatgctctttatatatcattaaaatagttactagtaatgat 264
Query: 65 atagtaagcagaggttgaacaaatagcatatttgacccatatcttatttcttctgcagct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atagtaagcagaggttgaacaaatagcatatttgacccatatcttatttcttctgcagct 324
Query: 125 tttctttttgcctgaagaacattcctcctgggtcttatctcttgccttacaatgttccac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttctttttgcctgaagaacattcctcctgggtcttatctcttgccttacaatgttccac 384
Query: 185 agtcatgagcttgttcagggtctgagattgagttaggaactatagaccacctgggcccca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtcatgagcttgttcagggtctgagattgagttaggaactatagaccacctgggcccca 444
Query: 245 aaagattgcaaatgaactcactttaaattgagacacaattcattttaacagcataggaaa 304
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 aaagattgcaaatgaactcactttaaaccgagacacaattcattttaacagcataggaaa 504
Query: 305 gactcacaatgcaatctaggtataaatgttacaggtcatgtgctcttctctgcaaagaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gactcacaatgcaatctaggtataaatgttacaggtcatgtgctcttctctgcaaagaca 564
Query: 365 gctgctaaaaccttgggactcaaggacagatgtactgcccatgcatgtatggcatgcagt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gctgctaaaaccttgggactcaaggacagatgtactgcccatgcatgtatggcatgcagt 624
Query: 425 aaatcaacacatgtgagaacaatacatgttccatttcaattggtaagaatttcaaaatat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaatcaacacatgtgagaacaatacatgttccatttcaattggtaagaatttcaaaatat 684
Query: 485 tcaaacagtaaagcagagtgagtaaattattaaagaaataaccggtcatgtattacatat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 685 tcaaacagtaaagcagagtgagtaaattattaaagaaataaccggtcatgtattaaatat 744
Query: 545 ttgaccatttcagaacaggggaatgattcagaaagaatatgatgtaagaaatatcttagt 604
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 745 ttgaccatttcagaacaggggaatgattcagaaagaatatgacgtaagaaatatcttagt 804
Query: 605 caaaaagttgaaata 619
|||||||||||||||
Sbjct: 805 caaaaagttgaaata 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_c10.g1 MSMg01no533_c10.g1 CHROMAT_FILE:
MSMg01no533_c10.g1 PHD_FILE: MSMg01no533_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:17 2005
(622 letters)
>mm_chr3_112182696_112183719
Length = 1024
Score = 1176 bits (608), Expect = 0.0
Identities = 620/624 (99%), Gaps = 2/624 (0%)
Strand = Plus / Minus
Query: 1 tttcacagttacttctccttttaactctccttggtcttgatcttggtcacacacttgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 tttcacagttacttctccttttaactctccttggtcttgatcttggtcacacacttgaga 765
Query: 61 ttgtggagatgaatacagcacagatctggaatgactgtgaatgtgcttacagagggaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 ttgtggagatgaatacagcacagatctggaatgactgtgaatgtgcttacagagggaatt 705
Query: 121 agctaaggagaaaagccagaattaaataatctcacactctaggctaaggacctagatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 704 agctaaggagaaaagccagaattaaataatctcacactctaggctaaggtcctagatgaa 645
Query: 181 gaaagacttcaagaagtcttgtagatataagcaatcgcccctctctccccactctgcttt 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 644 gaaagacttcaagaagtcttgtaaatataagcaatcgcccctctctccccactctgcttt 585
Query: 241 gtaggtgtcatctggagtacaactttactccctcatac-ttttttttttttgccatgata 299
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 584 gtaggtgtcatctggagtacaactttactccctcatactttttttttttttgccatgata 525
Query: 300 ttctatatcactactgagcg-aaatgaagaaacttcaccacacatttaaatgtttcaatt 358
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ttctatatcactactgagcgaaaatgaagaaacttcaccacacatttaaatgtttcaatt 465
Query: 359 tataaaactagataaacctttcctttctgtatattgcattttttttacatttgtcagtgt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tataaaactagataaacctttcctttctgtatattgcattttttttacatttgtcagtgt 405
Query: 419 aacgaaaattctaacagtttatctgttgtcctttctgtacttttgattacgtaatctcac 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aacgaaaattctaacagtttatctgttgtcctttctgtacttttgattacgtaatctcac 345
Query: 479 caaataataaacgtgaatatgtttgctgtaaaacgtactgatagacactctattcaattt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 caaataataaacgtgaatatgtttgctgtaaaacgtactgatagacactctattcaattt 285
Query: 539 gcagtgtttattctctgttgccatatgattacctaagatattcacagttagaatgggaat 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gcagtgtttattctctgttgccatatgattacctaagatattcacagttagaatgggaat 225
Query: 599 ggagttaggatatagacactgtag 622
||||||||||||||||||||||||
Sbjct: 224 ggagttaggatatagacactgtag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1024
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1014
Effective search space: 620568
Effective search space used: 620568
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
