TTCCTTGTTTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCA
GGATCCGCGGAATTCCAGTCATACTTCACTATGCTGTTGTATTAAATCTG
AGCCAGTTTTATATGATACATATTAAACTTTTCTTATGATACTATATGTT
CAAAGTTTTCCTTTAATTTATGGCAAGGGGCTAACTTCGTTATCTTAGCT
GTAGAACATTCTTAATCAAAAAGAAAGCTTTTGTTGTTTATAATTTCATA
AGACTTCTATATTTCATAAAACATTATTTTACTTGGTGTAGTGGTGCATA
TCTGTAATCCTGACAATCAGGAGAATCAAGGTGAGGATGGCAAAATTGAA
GATAGACTGATCTGTGTAGAAGGGTCTTGTCTTAATCAGGAAAAATTTTC
TCAAAACTGTATTTTTTCAGCTTTCTTAAACACTCCAGAGTCTGAGCTCT
GATGGTACCCATACTATATTATTACCATAAGAATGAAATTAAACAACATG
AATGTAATACTGATGGGCCTGTTCAACAATTTATACCAATCATGGGTCAA
CAGTAACTTTGGCTCTTTTTATATTTTAAATTGTAAATCGATTCTTTTCT
CATAAAATATATCCTGACTGTAATTTCACTTGCCTCCATTCTTCTCAGTT
CCTCTACATCTCCTCTCTCCTATGTTTCTACTCCCATTCTGATTCTCATT
CGAAACAAACATGTTTCTAAAAGGCAATAN

TTTTCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTGAGAAGTAGTTAAATG
ATTAAACAAACATATGATAATTGAGAGAAATTATAATAAACTGGAATTCT
TTTAAAAATCTCTCTGGAAAACACTATTATAACAGTGAAAATATAAGCTG
ATGATTGAGAAGAATGTTTTTTAGAAAACATGTCTGATAACGGTCTGTAT
CTACAAGTTAGAAAAATCTCTTTAAGCTCAATATAAAGAAAATTGATGAG
AGATAAAAGGAGCCTTGTATCTGAATTAACATTCATCTAAATGATATGTA
GATACCAGTACATCAAATGATGCGCCACATCACCTTGCAATGGGGAATAG
AAAAATTGCAAGAGTGAAACACCAATGTTCACTTTCCACAGGCTAAAATG
ATGAGACCCAGTGAATGACTATGTCAAATGATGAATATGTGCAGGTTCAT
TTAATTTCATTTATCGTTAGAAGAATGCAAAATAGCACAACTACTTTGGA
AGACAATTTCATTGTTTTTTTACAGAGAAAAAGACTTGCCATTTTAGAAA
TATTGTACTTGGCAACTACTCAAGGAAGGTGAAAAACTACAAATAACTCC
TAACTTGCCTACTAATGTTTATAATATAAAAACCGTGATTTCGAAAATGA
GGCTCAATGAAGATAATCATTGTTGGATGACTC

Query= MSMg01no533_c15.b1 MSMg01no533_c15.b1 CHROMAT_FILE:
MSMg01no533_c15.b1 PHD_FILE: MSMg01no533_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:18 2005
         (637 letters)



>mm_chr3_20614514_20615550
          Length = 1037

 Score = 1123 bits (581), Expect = 0.0
 Identities = 620/633 (97%), Gaps = 1/633 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattccagtcatacttcactatgctgttgtattaaatctgagccagttttatatgatac 65
           ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagtcatacatcattatgctgttgtattaaatctgagccagttttatatgatac 264

                                                                       
Query: 66  atattaaacttttcttatgatactatatgttcaaagttttcctttaatttatggcaaggg 125
           |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 265 atattaaacttttcttatgatactatatgttcaaagttttccttcaaattatggcaaggg 324

                                                                       
Query: 126 gctaacttcgttatcttagctgtagaacattcttaatcaaaaagaaagcttttgttgttt 185
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctaacttcgttatctcagctgtagaacattcttaatcaaaaagaaagcttttgttgttt 384

                                                                       
Query: 186 ataatttcataagacttctatatttcataaaacattatttt-acttggtgtagtggtgca 244
           |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 385 ataatttcataagacttctatatttcataaaacatttttttaacttggtgtagtggtgca 444

                                                                       
Query: 245 tatctgtaatcctgacaatcaggagaatcaaggtgaggatggcaaaattgaagatagact 304
           |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 445 tatctgtaatcctgacaatcaggagattcaaggtgaggattgcaaaattgaagatagact 504

                                                                       
Query: 305 gatctgtgtagaagggtcttgtcttaatcaggaaaaattttctcaaaactgtattttttc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gatctgtgtagaagggtcttgtcttaatcaggaaaaattttctcaaaactgtattttttc 564

                                                                       
Query: 365 agctttcttaaacactccagagtctgagctctgatggtacccatactatattattaccat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agctttcttaaacactccagagtctgagctctgatggtacccatactatattattaccat 624

                                                                       
Query: 425 aagaatgaaattaaacaacatgaatgtaatactgatgggcctgttcaacaatttatacca 484
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 625 aagaatgaaattaaacaacatgaatgtaatactgatgggcctgttcagcaatttatacca 684

                                                                       
Query: 485 atcatgggtcaacagtaactttggctctttttatattttaaattgtaaatcgattctttt 544
           |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 685 atcatgggtcaacagtaattttggttctttttatattttaaattgtaaatcgattctttt 744

                                                                       
Query: 545 ctcataaaatatatcctgactgtaatttcacttgcctccattcttctcagttcctctaca 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctcataaaatatatcctgactgtaatttcacttgcctccattcttctcagttcctctaca 804

                                            
Query: 605 tctcctctctcctatgtttctactcccattctg 637
           |||||| ||||||||||||||||||||||||||
Sbjct: 805 tctcctttctcctatgtttctactcccattctg 837


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)