Query= MSMg01no534_d23.b1 MSMg01no534_d23.b1 CHROMAT_FILE:
MSMg01no534_d23.b1 PHD_FILE: MSMg01no534_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:41 2005
(474 letters)
>mm_chr3_101390917_101391790
Length = 874
Score = 909 bits (470), Expect = 0.0
Identities = 473/474 (99%)
Strand = Plus / Minus
Query: 1 cacttgctcacctgtatgcgcccaggcttgtgtgtcagagctctcacatattcacctgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 cacttgctcacctgtatgcgcccaggcttgtgtgtcagagctctcacatattcacctgta 615
Query: 61 tcaaagttgcttacaggagaaatgcttagtaggtcaaaacagctatgtggccatgtgagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tcaaagttgcttacaggagaaatgcttagtaggtcaaaacagctatgtggccatgtgagt 555
Query: 121 aagtagatcatagaaaaacatatgtgtgtgtccccaaacaaagacagtgactaaaatatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aagtagatcatagaaaaacatatgtgtgtgtccccaaacaaagacagtgactaaaatatc 495
Query: 181 agctgattatgctgcttccagagctggtaacagcttccagctcacaaacttcaggtgact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agctgattatgctgcttccagagctggtaacagcttccagctcacaaacttcaggtgact 435
Query: 241 ttgcacacctgagttaggtttacagcatggaggcctttgctttgcccttgacagtttgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ttgcacacctgagttaggtttacagcatggaggcctttgctttgcccttgacagtttgtg 375
Query: 301 cccggctctgaaccctaagccatttcactttaaaggctgggccagtgagtgatactagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cccggctctgaaccctaagccatttcactttaaaggctgggccagtgagtgatactagaa 315
Query: 361 atccttgctctttttggttttgtttttttccccagacttataagcagaagtgttcagttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atccttgctctttttggttttgtttttttccccagacttataagcagaagtgttcagttg 255
Query: 421 tgaatagtgttgaatgtggggctttttagcaacccgggggaaggttatgctaga 474
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 254 tgaatagtgttgaatgtggggctttttagcagcccgggggaaggttatgctaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no534_d23.g1 MSMg01no534_d23.g1 CHROMAT_FILE:
MSMg01no534_d23.g1 PHD_FILE: MSMg01no534_d23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:41 2005
(406 letters)
>mm_chr3_101212670_101213476
Length = 807
Score = 756 bits (391), Expect = 0.0
Identities = 403/407 (99%), Gaps = 1/407 (0%)
Strand = Plus / Plus
Query: 1 atccctagaaagtaacgtataatgtcacatctccacccctgcaacacacaatgtccttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 atccctagaaagtaacgtataatgtcacatctccacccctgcaacacacaatgtcctcac 260
Query: 61 actcaaaggaaccccggtggaatagtatgtggtagattgtgacattctgtgaggctcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actcaaaggaaccccggtggaatagtatgtggtagattgtgacattctgtgaggctcctc 320
Query: 121 ccccaaccaatatcctgaaagaggagggaaacgctcgattcagctatgagaggaatgctt 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccccaaccaatatcctggaagaggagggaaacgctcgattcagctatgagaggaatgctt 380
Query: 181 gcgccttgggcatccacagtagttggattgtgggactgtgtgccctgcctaggcccgggg 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcgccttgggcatccacagtagctggattgtgggactgtgtgccctgcctaggcccgggg 440
Query: 241 ctgacttcttagctggccttcaaaggacagatcgccattgaactctgggcaatacccaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgacttcttagctggccttcaaaggacagatcgccattgaactctgggcaatacccaaa 500
Query: 301 -gtagctcgaggaagccgagagctgtgtttctgcagtgcgcaccatcgatccatagcatt 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtagctcgaggaagccgagagctgtgtttctgcagtgcgcaccatcgatccatagcatt 560
Query: 360 tgaagctatttttctctgcaagcgtccacaaaattcattactttaca 406
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaagctatttttctctgcaagcgtccacaaaattcattactttaca 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 807
Length adjustment: 9
Effective length of query: 397
Effective length of database: 798
Effective search space: 316806
Effective search space used: 316806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
