CCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCAACTGGAATCTAGAATGGCTGAGAAGCACTTAAAAACATGTCC
CACATCCTTAGTCATCAGGGAAATGCAAATCAAAATGACCCTAAGATTCC
ACCTTACAACACTCAGAACGGCTAAGATAAAAATCTCAGGTCACAGCAGA
TGCTAGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGCTAGGA
TTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTGGGGGTTCCCAGAAA
ATTGGAAATAGTTCTACCAGAGAACACAGCTATACAATCCTGGGCATATA
CCCAGAAGATTCTCCAACATATAACAAGGACACATGCTTTACTATTTTCA
TGGCAGCCTTATTTATAAAGCCAGAAGCTGGAAAGAACCCAGATGTCTTT
CAACAGAGGAATGAATACAGAAAATGTGGTACATTTAGACAATGGAATGC
TACTCAGGTATTAAAAACAATGACTTTATGAAATTCTTAGGCAAATGGAT
GGAACTAGGAAATATCATCCTGAGGTCTGTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCACATCAAAAAAAAAAACCAAAATAAAACAAACAAACAAAAA
ACAACTACACATGTTATGTACTCACTGAGAAGTTGATATTAGCCCAAAAA
GAATCTCAGAATATCCACCATACAACTCACAGACCATAGGAAACCCCAGA
AGAAAGAACCCCACCCCAAAGTGTGG

ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAAGCAACTAGGGTGAGGATCTTA
TGCCCACACCCACAGTGACACACCTACTCCAACCAGGTCACACCTATTCC
AAGAAGGCCACTCCTCCAAATGGTGCCACTCCCTGGTCCAAGAACATACA
AACCATCACAGTGGGGGAACATCCTCATAGAGGCAGGGAGAAGGGGATGG
GATAGGAGGTTTCTAGAGGGGAGACCTGGAAAGGGGTTAACATTTTAAAT
GTAAATAAAGAAAAATCCCCCCAAAAGAAAAAAAGAATAGTTATCACAAT
TCTTAGAAAACTTTAAGTTAAAACTATGATGATCTAAAATATCACATTGT
TTATTAGAATGTGTAGTGAAGAAATGGAAACCTTATGACAAGAATATAGA
GAAAATATAGCTTCAAGGTATTGATAAAAGCCAAAAACATCATGGCTGTT
ATGGAAACCATATAACCAGTTTGCAAAGTGCAAAATAAAATTCCATATGA
AAATACCACAAGCAAACCTATTTATTATTCTCCATTGTAATTAAGAAATG
AAATAAAAGTGAAAATAAATAATTTTTATATGACACACACACACAAGTGC
ACACACACACAAACACACACATGCACACACACACAAGGAATAAAAACAAT
TAGAAGTTCTAGTTAACCTCTGCAGGCACCTTGCTTAAATGGGGCAGCCT
CATGTGTTTGGATTCTGG

Query= MSMg01no535_f16.g1 MSMg01no535_f16.g1 CHROMAT_FILE:
MSMg01no535_f16.g1 PHD_FILE: MSMg01no535_f16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:09 2005
         (688 letters)



>mm_chr3_81526987_81528073
          Length = 1087

 Score = 1268 bits (656), Expect = 0.0
 Identities = 680/688 (98%), Gaps = 1/688 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    caagcaactagggtgaggatcttatgcccacacccacagtgacacacctactccaaccag 60
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1012 caagcaactagggtgaggatcttatgcccacaccaacagtgacacacctactccaaccag 953

                                                                        
Query: 61   gtcacacctattccaagaaggccactcctccaaatggtgccactccctggtccaagaaca 120
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  gtcacacatattccaagaaggccactcctccaaatggtgccactccctggtccaagaaca 893

                                                                        
Query: 121  tacaaaccatcacagtgggggaacatcctcatagaggcagggagaaggggatgggatagg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  tacaaaccatcacagtgggggaacatcctcatagaggcagggagaaggggatgggatagg 833

                                                                        
Query: 181  aggtttctagaggggagacctggaaaggggttaacattttaaatgtaaataaagaaaaat 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832  aggtttctagaggggagacctggaaaggggttaacattttaaatgtaaataaagaaaaat 773

                                                                        
Query: 241  ccccccaaaagaaaaaaagaatagttatcacaattcttagaaaactttaagttaaaacta 300
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 772  ccccccaaaagaaaaaaagaatagtcatcacaattcttagaaaactttaagttaaaacta 713

                                                                        
Query: 301  tgatgatctaaaatatcacattgtttattagaatgtgtagtgaagaaatggaaaccttat 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  tgatgatctaaaatatcacattgtttattagaatgtgtagtgaagaaatggaaaccttat 653

                                                                        
Query: 361  gacaagaatatagagaaaatatagcttcaaggtattgataaaagccaaaaacatcatggc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652  gacaagaatatagagaaaatatagcttcaaggtattgataaaagccaaaaacatcatggc 593

                                                                        
Query: 421  tgttatggaaaccatataaccagtttgcaaagtgcaaaataaaattccatatgaaaatac 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  tgttatggaaaccatataaccagtttgcaaagtgcaaaataaaattccatatgaaaatac 533

                                                                        
Query: 481  cacaagcaaacctatttattattctccattgtaattaagaaatgaaataaaagtgaaaat 540
            | | ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 532  cgc-agcaaacctatttattattctccgttgtaattaagaaatggaataaaagtgaaaat 474

                                                                        
Query: 541  aaataatttttatatgacacacacacacaagtgcacacacacacaaacacacacatgcac 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473  aaataatttttatatgacacacacacacaagtgcacacacacacaaacacacacatgcac 414

                                                                        
Query: 601  acacacacaaggaataaaaacaattagaagttctagttaacctctgcaggcaccttgctt 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413  acacacacaaggaataaaaacaattagaagttctagttaacctctgcaggcaccttgctt 354

                                        
Query: 661  aaatggggcagcctcatgtgtttggatt 688
            ||||||||||||| ||||||||||||||
Sbjct: 353  aaatggggcagccccatgtgtttggatt 326


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1087
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1077
Effective search space:   730206
Effective search space used:   730206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)