Query= MSMg01no537_c21.b1 MSMg01no537_c21.b1 CHROMAT_FILE:
MSMg01no537_c21.b1 PHD_FILE: MSMg01no537_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:29 2005
(587 letters)
>mm_chr3_9726564_9727553
Length = 990
Score = 1017 bits (526), Expect = 0.0
Identities = 570/586 (97%), Gaps = 3/586 (0%)
Strand = Plus / Plus
Query: 5 gaattctatcgaggtttcgggctatctctctgcttgtgacaatctctgaagtctatactt 64
|||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattctaccgaggtgaagggctatctctctgctcgtgacaatctctgaagtctatactt 264
Query: 65 cctcctccttttgtgtttagattggaaaacatgtgtgtctacgaagtgaagcccttatta 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctcctccttttgtgtttagattagaaaacatgtgtgtctacgaagtgaagcccttatta 324
Query: 125 atgagacagggctcacagattgaacagcataaactccagtgctcagcaggcaatagcaac 184
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 325 atgagacagggctcacagattgaacaacataaactccagtgcccagcaggcaatagcaac 384
Query: 185 aatgatgcagtcagtgaatagttagccatgattctcacttttgtttaaagacaaaactca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatgatgcagtcagtgaatagttagccatgattctcacttttgtttaaagacaaaactca 444
Query: 245 ttatatatagtatttttaacactaaaaaaacatggtgtggaggaagagaaaaaaagaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttatatatagtatttttaacactaaaaaaacatggtgtggaggaagagaaaaaaagaaaa 504
Query: 305 gaaaaaataagagtttgatgaagattcaactttgattgttagggagtaagacttggaggc 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaaaaaataagagtttgatgaagattcaactttgattgttagggagtaagacttggagga 564
Query: 365 gg---aggcaagctgtttctcagcaccacccctactgggtactggatgctgagtgcgtag 421
|| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 565 ggctgaggcaagctgtttctcagcaccacccatactgggtactggatgctaagtgcgtag 624
Query: 422 tgtggtgggggcatgtctggaattctcatacaggagagttgcatgtaggaggatcatgaa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgtggtgggggcatgtctggaattctcatacaggagagttgcatgtaggaggatcatgaa 684
Query: 482 ttcatggtcagcccaatctggactctatgagctctgtctccaagtgggagtgagggaaga 541
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttcatggtcaggccaatctggactctatgagctctgtctccaagtgggagtgagggaaga 744
Query: 542 aacagacaaagaggaagggcgggggaaagggagtggggaagaggga 587
||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 745 aacagacaaagaggaagggcgggagaaagggagtggggaagaggga 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 990
Length adjustment: 10
Effective length of query: 577
Effective length of database: 980
Effective search space: 565460
Effective search space used: 565460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_c21.g1 MSMg01no537_c21.g1 CHROMAT_FILE:
MSMg01no537_c21.g1 PHD_FILE: MSMg01no537_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:29 2005
(577 letters)
>mm_chr3_9895648_9896623
Length = 976
Score = 439 bits (227), Expect = e-127
Identities = 245/251 (97%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1 tctattgcacttaggttgaaagtgtatagaatcagagggcaaggctgtatgatgtctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tctattgcacttaggttgaaagtgtatagaatcagagggcaaggctgtatgatgtctgcc 393
Query: 61 actttctggacagtggcacaaaggaaatgtctgagacgacttt-cgcccaaaaggcctat 119
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |
Sbjct: 392 actttctggacagtggcacaaaggaaatgtctgagacga-tttccgcccaaaaggcgga- 335
Query: 120 aacttctctggtggagggcatacaggagacagccaccagtgcatgcccacacgctgtggc 179
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aacttctctggtggagggcgtacaggagacagccaccagtgcatgcccacacgctgtggc 275
Query: 180 ctcagagtgcaatggcagatctgagaagaggaaatgcataaacccaatcctcgatgcccc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ctcagagtgcaatggcagatctgagaagaggaaatgcataaacccaatcctcgatgcccc 215
Query: 240 ccagagggccg 250
|||||||||||
Sbjct: 214 ccagagggccg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 976
Length adjustment: 10
Effective length of query: 567
Effective length of database: 966
Effective search space: 547722
Effective search space used: 547722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
