Query= MSMg01no537_g23.b1 MSMg01no537_g23.b1 CHROMAT_FILE:
MSMg01no537_g23.b1 PHD_FILE: MSMg01no537_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:48 2005
(687 letters)
>mm_chr3_90286752_90287838
Length = 1087
Score = 1062 bits (549), Expect = 0.0
Identities = 573/581 (98%), Gaps = 1/581 (0%)
Strand = Plus / Minus
Query: 71 atgtaatgctgactactgatcccaactctacacacactagactcacactctaccaactaa 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 atgtaatgctgactactgatcccaactctacacacactagactcacactctaccaactaa 1028
Query: 131 gctgtatcaaccctgccttcattttgttttgtgacataaggtctttctatgtatacagtt 190
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1027 gctgtatcaaccctgccttcattttgttttgagacataaggtctttctatgtatacagtt 968
Query: 191 caggctggccttaaattaccaatccccctgtccaagttttccaatgctggggttataggt 250
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 967 caggctggccttaaattaccaat-cccctgcccaagttttccaatgctggggttataggt 909
Query: 251 gtgccacatctgactaaacaggtcagttttctggcagtgggttatttaggttttgagaca 310
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 gtgccacatctgattaaacaggtcagttttctggcagtgggttatttaggttttgagaca 849
Query: 311 agaatgtatgtgcatgtgtatatgtactgaaggctggcctcagacttcagatcttcctgc 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 agaatgtatgtgcatgtgtatatgtactgaaggctggcctcagacttcagatcttcctgc 789
Query: 371 ctatgcttccaagtgctggggttaataagcatgtaccacaaaacatcagtaagagcttgg 430
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 ctatgcttccaagtactggggttaataagcatgtaccacaaaacatcagtaagagcttgg 729
Query: 431 ataccactaagtggaaggaggcagcaaggagacgatctctagcgctagaccaacctaccc 490
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 728 ataccactaagtagaaggaggcagcaaggagacgatctctagcactagaccaacctaccc 669
Query: 491 acataaaaaagtaggggagagagcgggacaggacaggacatgagacctcaagcaacaaag 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 acataaaaaagtaggggagagagcgggacaggacaggacatgagacctcaagcaacaaag 609
Query: 551 ggcctgaatatgaagctcagtggcaaactgactgcccagcatatgagaggtgtggtgttc 610
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 608 ggcctgaatatgaagctcagtggcaaactgactgcccagcatataagaggtgtggtgttc 549
Query: 611 aacctcagcaccacacacacacacacacacacacacacaca 651
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aacctcagcaccacacacacacacacacacacacacacaca 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 83
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_g23.g1 MSMg01no537_g23.g1 CHROMAT_FILE:
MSMg01no537_g23.g1 PHD_FILE: MSMg01no537_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:48 2005
(342 letters)
>mm_chr3_90258826_90259567
Length = 742
Score = 654 bits (338), Expect = 0.0
Identities = 341/342 (99%)
Strand = Plus / Plus
Query: 1 caatgcgcaagcgcagctgttcctggggcctatggcggatgcggaaggagcgtacagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgcgcaagcgcagctgttcctggggcctatggcggatgcggaaggagcgtacagcat 260
Query: 61 cgagcagtgcaagtgccattcgggctacctctcgggcatggagctgtccattcctcactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgagcagtgcaagtgccattcgggctacctctcgggcatggagctgtccattcctcactg 320
Query: 121 ggagccctgataccaccatgtaagcatcaccaatggtctctacctgtggggcgggggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagccctgataccaccatgtaagcatcaccaatggtctctacctgtggggcgggggaga 380
Query: 181 ataaaggacaagctttgcctgcgttacccgcctacattctgtgcctatcaactggcctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaaggacaagctttgcctgcgttacccgcctacattctgtgcctatcaactggcctgt 440
Query: 241 caatgtactcagcctcagcccgtttctctgtctgttcctgggttccccccacccctgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caatgtactcagcctcagcccgtttctctgtctgttcctgggttccccccacccctgtgt 500
Query: 301 gtttctgcccatgttcttggtctttgtttcctcctcctcctc 342
||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 gtttctgcccatgttcttggtctttgttttctcctcctcctc 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
