NNNNNAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCAAGAATATATCAAAATGATCATCCATCATGATCAAGTA
GGCTTCATCCCTGGGGTTCTGGGAAGGTTTAATATACGGAAATCCTTGAC
AGTAATACATTACATAAACAAAATCAAAGACAAAAAACCACATCATCATA
TTGTTAGATGCTGAGAAAGCATTTGAAAATCCAACACCCATTCATGATAA
AAGAGTTGGAATGCTCAGGATTTCAAGACCCATATCTAAACATAGGAAAA
GCAATCTACAGCAAACCAGTAGCCAACATCAAACTTAATGGAGAGAACCT
TGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTC
CCTACCTATTAAATATAGTACTCAAAGTCCTAGCCAGAGCAATTAGACGA
AAAAAGGAGATCAAGGGGAAACAAATTTGAAAGGAAGAAGACAAAATATC
ACTATTTGCAGATGATATGATAGTATATATAAGTGATCCTAAAAATTCCT
CCAGAGAACACCTAAGCCTGATAAATGGCTTCAGTGAAGTAGCTGGATAT
AAAATTAACTCAAACAAATCAATGGCCTTTCTCTACACAAAGAATAAACA
GGCTGAGAAAGAAATTANGGAAACACCACCCTTCACAATAGTCACATATA
TTATAAAACACCCTGGTGTGACTCCAACTAATGCAGTGAAAGAT

NNCCCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCATAAACTGAACTCAGGCATCT
AGGTGGGGGCTGCTGCTGGTGCTTCTTCTTCCTCTTCTTCTTCTTCTTCA
CTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT
TTAATGGTTTTTTCTATCCTACCTTGCTATCCATATTTAGGCACATTTTT
AAGCAATAGTTTCTTTAACCACTCTGTGAGAAAATCAATCAAATGCAAGG
TTGAAGTCAGAGTTTGAAAGAGTTGTTAAATACAATGGAGTGTTTTTCTT
CCAAAAGAGAGACAGGACCCTGTCTGAATTTAGGAAAGATAACTCAAATG
TCAGGAAGAGGAAGGATGCACAGCGGAGGGTGGGAGTGAGCCAGTACTGC
TGTGGAACAAGTCCTGGGGAGATGGGGAGGTTACCTTTCCTGATAATTTA
TTGGAGAAAGAAACGGTAAGGAAACGTACTGTGGAATTTGATGATGAGTG
AGAGGAAGAAGAGTGGAGTATTAAGGCTGATCCAGGAGGTCAGGAGTCAA
TGTTAGGTCAAATGCTAATGAATTAACTAGCATACAGTANACACAAGAAG
AGAACAATAGTGATAATTAGTTCACTAATATATACAGTACAGGTAACTAG
AAATTTCTAATCATATTTGAATTGCTAGTTTGAGTTCATAGGAA

Query= MSMg01no537_l11.g1 MSMg01no537_l11.g1 CHROMAT_FILE:
MSMg01no537_l11.g1 PHD_FILE: MSMg01no537_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:09 2005
         (661 letters)



>mm_chr3_7596142_7597202
          Length = 1061

 Score =  922 bits (477), Expect = 0.0
 Identities = 583/624 (93%), Gaps = 15/624 (2%)
 Strand = Plus / Plus

                                                                       
Query: 44  cttcttcttcctcttcttcttcttcttcactattattattattattattattattattat 103
           |||||||||| |||||||||||||||||    || || || || || || || || || |
Sbjct: 247 cttcttcttcttcttcttcttcttcttc----ttcttcttcttcttcttcttcttcttct 302

                                                                       
Query: 104 tattatt-attattattattttaatggttttttctatcctaccttgctatccatatttag 162
           | || || |||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 303 tcttcttcattattattagtttaatggttttatctatcctatcttgctatccatatttag 362

                                                                       
Query: 163 gcacatttttaagcaatagtttctttaaccactctgtgagaaaatcaatcaaatgcaagg 222
           ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gcatatttttaagtaatagtttctttaaccactctgtgagaaaatcaatcaaatgcaagg 422

                                                                       
Query: 223 ttgaagtcagagtttgaaagagttgttaaatacaatggagtgtttttcttccaaaagaga 282
           |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 423 ttgaagccagagtttgaaagagttgttaaatacaatggagtg-ttttcttccaaaagaga 481

                                                                       
Query: 283 gacaggaccctgtctgaatttaggaaagataactcaaatgtcaggaagaggaaggatgca 342
           ||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||
Sbjct: 482 gacaggaccctgtctgaatttaggaaagataactcaaatgtca-gaa-ag--aggatgca 537

                                                                       
Query: 343 cagcggagggtgggagtgagccagtactgctgtggaacaagtcctggggagatggggagg 402
           |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 538 cagcagagggtgggagtgagccagtactgctgtggaacaagtcttggggagatggggagg 597

                                                                       
Query: 403 ttacctttcctgataatttattggagaaagaaacggtaaggaaacgta-----ctgtgga 457
           ||||||||||||||||||||||||||||||||||| |||||||| |||     |||||||
Sbjct: 598 ttacctttcctgataatttattggagaaagaaacgataaggaaatgtactaagctgtgga 657

                                                                       
Query: 458 atttgatgatgagtgagaggaagaagagtggagtattaaggctgatccaggaggtcagga 517
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 atttgatgatgcgtgagaggaagaagagtggagtattaaggctgatccaggaggtcagga 717

                                                                       
Query: 518 gtcaatgttaggtcaaatgctaatgaattaactagcatacagtanacacaagaagagaac 577
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 718 gtcaatgttaggtcaaatgctaatgaattaactagcatacagtaaacacaagaagagaac 777

                                                                       
Query: 578 aatagtgataattagttcactaatatatacagtacaggtaactagaaatttctaatcata 637
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 aatagcgataattagttcactaatatatacagtacaggtaactagaaatttctaatcata 837

                                   
Query: 638 tttgaattgctagtttgagttcat 661
           |||||||||||| |||||||||||
Sbjct: 838 tttgaattgctattttgagttcat 861


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space:   684201
Effective search space used:   684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)