NAACATATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTAAACTATACAAAAGCAATATACAGCAAACCAGTAGCCAA
CATCAAACTAAATGGAGAGAAACCCGAAACAATCCCACTAAAATCAGGGA
CTAGAGAAGGCTGCCCACTTTCTCCCTACCTATTCAAAATAGTACTTGAA
GTTCTAGACAAAACAATTCAACAACAAATGGAAATCAAGGGGATATCTCC
TTTTACAAAGCTCAAGTCTAAGAGGCTCAAGGAACTCCACATAAAACCAG
AGAAACTGAAACTTATAGAGGAGAAAGTGGTGAAAAGCCTCGAAGATATG
AGCACAAAAGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAG
ATTGAGAATTGATAAATGGGACCTAATAACATTGCCAAGCTTCTGTAAGG
CAAAAGACACTGTCAATAAGACCAATGCCACCAACTGATTGGGAGAGGAT
CCTTACTAATCCTAAATCAGATAGGGGACTAATATCCAATATATCTAAAG
AACTCAAGAAAATTTACTCCAGAAAAAAAAAATTTAAAATGGGGTATAGA
GCTAAACAAAGAATTCTCAACTGAGGTATTAAGGAATGGATGAGAAGAAC
CTGAAAAAATTGTCAAAATCCTTTATCATCAGAGAAAAGCAAATCATAAC
TACCCTGAAATTCCACCTTCCACCCAGTCAAAGTGGCTTAAAACCAAAAA
TTCAGGTGTAN

CCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTGTGTACCTATTTATAGTACTTGTA
GGTTAAGTACAGCTTATTCATTAGTGTACCAAAACCAGAATACATTTCAT
TTTAGTTATCTATGTAATATTAGAGCTAAATGTGAGTGAACAACTATTTT
CATGAAAACTTCTTACTGCCATCTTACTTGGTCCTCCAATGAACATACAT
TTGAAGATTCCATATATTAAACTTTGATTTTTAACATACTGTACATTTTT
GAGACATGGAATAGAATTGCATCTAGGGGGCATAGAAATAAAGATATTTG
AAATACATCCAACTAATGGGGTGGAACTGAGCCAGTCTCTTTGGTGTTAG
CCAACAAATAGAACATAGCTAAGATAGTGCACTTCTGAGATTTTGTAACA
TGGTTAATTTAGATACTTAGTGCTGTAGCCTATTGTGAGTCTGTCAAATG
TTTCCCCTTTGAAAGTAGTATGGCCACCCATATGATTTTTGGGTTTTTTT
GTATTCAAAGTATTAAACATGTGTCCCAAAGACATCCATTTTTTTTTCAT
TCTGCCATTTCACAATATCTTTTTATTCTTCATAAGTCAGATTAGGACTG
TTTACAGAAAATCTGGAAAGACAATAGCCAAAGTTCTTAACTAATTTTTA
TCCATCTCAGTTTCTTATAACTTAGAAATTAGTTTTATAGAAAATCTAGA
AAGAA

Query= MSMg01no537_p05.g1 MSMg01no537_p05.g1 CHROMAT_FILE:
MSMg01no537_p05.g1 PHD_FILE: MSMg01no537_p05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:28 2005
         (594 letters)



>mm_chr3_16117655_16118649
          Length = 995

 Score = 1094 bits (566), Expect = 0.0
 Identities = 588/596 (98%), Gaps = 3/596 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgtgtacctatttatagtacttgtaggttaagtacagcttattcattagtgtaccaaaa 60
           |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtgtacctatttatagtggttgtaggttaagtacagcttattcattagtgtaccaaaa 260

                                                                       
Query: 61  ccagaatacatttcattttagttatctatgtaatattagagctaaatgtgagtgaacaac 120
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagaatacatttcattttggttatctatgtaatattagagctaaatgtgagtgaacaac 320

                                                                       
Query: 121 tattttcatgaaaacttcttactgccatcttacttggtcctccaatgaacatacatttga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattttcatgaaaacttcttactgccatcttacttggtcctccaatgaacatacatttga 380

                                                                       
Query: 181 agattccatatattaaactttgatttttaacatactgtacatttttgagacatggaatag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agattccatatattaaactttgatttttaacatactgtacatttttgagacatggaatag 440

                                                                       
Query: 241 aattgcatctagggggcatagaaataaagatatttgaaatacatccaactaatggggtgg 300
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aattgcatctagggg-catagaaataaagatatttgaaatacatccaactaatggggtgg 499

                                                                       
Query: 301 aactgagccagtctctttggtgttagccaacaaatagaacatagctaagatagtgcactt 360
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aactgagccagtctctttagtgttagccaacaaatagaacatagctaagatagtgcactt 559

                                                                       
Query: 361 ctgagattttgtaacatggttaatttagatacttagtgctgtagcctattgtgagtctgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctgagattttgtaacatggttaatttagatacttagtgctgtagcctattgtgagtctgt 619

                                                                       
Query: 421 caaatgtttcccctttgaaagtagtatggccacccatatgatttttgggtttttttgtat 480
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 620 caaatgtttcccctttgaaagtagtatggccacccatatgatttttggttttttttgtat 679

                                                                       
Query: 481 tcaaagtattaaacatgtgtcccaaagacatccattttttttt--cattctgccatttca 538
           |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 680 tcaaagtattaaacatgtgtcccaaagacatccatttttttttttcattctgccatttca 739

                                                                   
Query: 539 caatatctttttattcttcataagtcagattaggactgtttacagaaaatctggaa 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caatatctttttattcttcataagtcagattaggactgtttacagaaaatctggaa 795


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 995
Length adjustment: 10
Effective length of query: 584
Effective length of database: 985
Effective search space:   575240
Effective search space used:   575240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)