TTTTAACCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTTTGAAGGCTAAAGAGAAATGCTTGTACTTGACAACT
GAAGGAACAGCTTGACCAGAGGAAAACAGTGTTGAAGCCTGTCAGTGAAT
GTAGCTAACATATGTTGTATTTATAGACAGGGAGAAAACAGAACTTAGCA
GGTCCTTGGAAAATGTGCAAGCTGTCTGACAGGTGTGACATTTTTGTGCA
ACAAGTAAGAGTTCTGCTGAGCAGCGACCGTGTCCAGTGAGACTTGACTG
GTCACAGATGATGATTCTAGCTCACTGAAATGTTTCTTCAGTGTCTGTGG
CGAGTAATACCAGAAGTCAAGTAAGGATGACTACCAACAATAAAGTCGGG
AATACACTCAGCTAAATCAGCAAAAGATGGGCTGGAGAGAGGGCTCAGTT
TGTAAAGTGGTTGCTGTACAAACATGAGGGCCTGTGTTTCATCCCTTAGA
AATCATATAGAGGGAAAGCCATGCACTATGGCATATGCCTTCGAGCTAAG
AGGGAGAAAGGAGGATACAGGGCAATCTTGGTAGCTTGCTGGCCTGCCAG
CACAGCTGAATTTTGTAGTCTTGGTTCGGTGAGCGACTGGATCTCAAAAA
GTATGATGAAGAGTAATTGAGAAAGACATCTAATATCTGGGCTTCATGTG
TGCACACATGCAACTCATACACATGCACCCGCAG

AAATTCACTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCG
AATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGG
AAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATG
GCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGA
AAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCAC
TCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATTGTACTACCG
GAGGATCCAGCAATACTTCTCCTGGGCATATATCCAGAAGATGCCCCAAC
GGGTAAGAAGGACACATGCTCTACTATGTTCATAGCAGCCTTATTTATAA
TAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCTACAGAAGAATGGATA
CAGAAAATGTGGTACATCTATACAATGGAGTACTACTCAGCTATTAAAAA
GAATGATTTTATGAATTTCCTAGCCCAAATGAATTGGACCTGGGAGGGCA
TCCATCCGGAGTGAAGGAAACCCCTTCCCCAAGGGACCTCCCCCCATATT
GTTCCCCCCGGGAAAAGGGGGAATTTTAACCCCAAAACCCTTGGAATACC
CCCAAAATATAAAAAACAACATTTTCCCTAAACCCCTGGGAAATTCCCCA
AAAN

Query= MSMg01no537_p15.b1 MSMg01no537_p15.b1 CHROMAT_FILE:
MSMg01no537_p15.b1 PHD_FILE: MSMg01no537_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:30 2005
         (558 letters)



>mm_chr3_137244146_137245103
          Length = 958

 Score = 1019 bits (527), Expect = 0.0
 Identities = 548/555 (98%), Gaps = 2/555 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttgaaggctaaagagaaatgcttgtacttgacaactgaaggaacagcttgacc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gaattctttgaaggctaaagagaaatgcttgtacttgacaactgaaggaacagcttgacc 516

                                                                       
Query: 65  agaggaaaacagtgttgaagcctgtcagtgaatgtagctaacatatgttgtatttataga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 agaggaaaacagtgttgaagcctgtcagtgaatgtagctaacatatgttgtatttataga 456

                                                                       
Query: 125 cagggagaaaacagaacttagcaggtccttggaaaatgtgcaagctgtctgacaggtgtg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cagggagaaaacagaacttagcaggtccttggaaaatgtgcaagctgtctgacaggtgtg 396

                                                                       
Query: 185 acatttttgtgcaacaagtaagagttctgctgagcagcgaccgtgtccagtgagacttga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 acatttttgtgcaacaagtaagagttctgctgagcagcgaccgtgtccagtgagacttga 336

                                                                       
Query: 245 ctggtcacagatgatgattctagctcactgaaatgtttcttcagtgtctgtggcgagtaa 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 335 ctggtcacagatgatgattctagctcactgaaatgtttcttcagtgtctgtggcaagtaa 276

                                                                       
Query: 305 taccagaagtcaagtaaggatgactaccaacaataaagtcgggaatacactcagctaaat 364
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 taccagaagtcaagtaaggctgactaccaacaataaagtcgggaatacactcagctaaat 216

                                                                       
Query: 365 cagcaaaagatgggctggagagagggctcagtttgtaaagtggttgctgtacaaacatga 424
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 215 cagcaaaagatgggctggagagagggctcagtttgtaaagtggttgctgtacaaacataa 156

                                                                       
Query: 425 gggcctgtgtttcatcccttagaaatcatatagagggaaagccatgcactatggcatatg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gggcctgtgtttcatcccttagaaatcatatagagggaaagccatgcactatggcatatg 96

                                                                       
Query: 485 ccttcgagctaag-agggagaaaggaggatacagggcaatcttggtagcttgctggcctg 543
           ||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  ccttcgagctaagaagag-gaaaggaggatacagggcaatcttggtagcttgctggcctg 37

                          
Query: 544 ccagcacagctgaat 558
           |||||| ||||||||
Sbjct: 36  ccagcagagctgaat 22


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space:   519504
Effective search space used:   519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)