XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGAACT
CTTCAGCTGGGGAACGGTGGTAATGAAGTGTTCCCGTAAAACAGACTGTT
GAGAAGGATTCAACTGCGTGAATTCAGAACTCTTCAGCTGGGGAATGGTG
GTAATGAAGTGTTTCCGTAAAACAGACTGTTGAGAAGGATTCAACTGCGT
GAATTCAGAACTCTTCAGCTGGGGAATGGTGGTAATGAAGTGTTCCCGTA
AAACAGACTGTTGAGAAGGATTCAACTGTGTGAATTCAGAACTCTTCAGC
TGGGGAACAGGGTACCCGTAAGTATAGCTTTACAAGGTAAGTCTAGTCTT
GAACTTTCTAACGAAATTCAAGACAGTCTATCAGAAGTAAAGTGGGAAAT
AGCTTTACAAGGTACGTCTGGCCTTGAACTTTCTAACGAAATTCAAGACA
GTCTATCAGAAGTAAAGTGGGAAATAGCTTTACAAGGTATGTTTGGCCTT
GAACTTTTTCTAGTGTTAGGAGCCTTTTTGTTCCTTTTCACATGTTATCA
AGTGGTTAAGGCAGGGCTGAAAATTCTGGATGANATTCAGGGCAATCTAT
CAGAAGTAAAGCGGGGAGAGAGAGTAGGAGCAAAGAGGAAATATGGTACA
CAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTT
TAGGTCAGGTAAGAATACCTGGGGAGAGATTAGAAGGAAAGAAAAAGAAA
AAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTCCTCACAGGGCTCCATTCTTGCACTGTATTCTGAC
ATCTTCTCCATCTTTATATTTAATTGCTGGATATCCAGAGTGATTTTAAT
TTGAGATGTATAGATAGACTTATTATCATAAGATGCATTCATGTCATATA
AGCAAATAATTTATAAACATAACAAATATTACGTGTAATACTCTGCCACC
AAAACAGGAATCCAAATTATGCACATCACAATTGGTTATATCATTATATT
GATTACAGAAATCTAGAGAATATCTTGATAAGAAAAACATATGGTTTGTA
GTTCTGGTTTCATGTTAGAATGTTAAGCCCTTTCATAGGGAGAGAAATGT
TATGATGTCCTATGCAAGTAGGAAGTAAAAATAGGTCATGTTAATGCATG
CTTATTTCTGTCTGAAAACCAGGGAGGGTACAGCATTCACAAGTATGAGT
ATAAGTATGCTGGAAATAAGAATAGAACATAAACAAAATCTGAAACAACA
TTAAGGGTTTATTAATTAGCTGTAATAGATGATTCTAAACAGTCAATTCT
ACCTGTTGGGAGGAGGAAAATGAAGTTCTAATATATTGCTGAATATGTGG
ACCATGAATCTGTCCTATGCCCTTAGATGAGTCATCAATAAAATAAGTAT
ATACCTGTGAAATAAGAAAACGTTGGACCAATTCTGTAATCACAATTCC

Query= MSMg01no538_b16.g1 MSMg01no538_b16.g1 CHROMAT_FILE:
MSMg01no538_b16.g1 PHD_FILE: MSMg01no538_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:41 2005
         (576 letters)



>mm_chr3_112374157_112375133
          Length = 977

 Score = 1069 bits (553), Expect = 0.0
 Identities = 571/577 (98%), Gaps = 1/577 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctcacagggctccattcttgcactgtattctgacatcttctccatctttatatttaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctcacagggctccattcttgcactgtattctgacatcttctccatctttatatttaat 260

                                                                       
Query: 61  tgctggatatccagagtgattttaatttgagatg-tatagatagacttattatcataaga 119
           |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 tgctggatatccggagtgattttaatttgagatggtatagatagacttattatcataaga 320

                                                                       
Query: 120 tgcattcatgtcatataagcaaataatttataaacataacaaatattacgtgtaatactc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcattcatgtcatataagcaaataatttataaacataacaaatattacgtgtaatactc 380

                                                                       
Query: 180 tgccaccaaaacaggaatccaaattatgcacatcacaattggttatatcattatattgat 239
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 tgccaccaaaacaggaatccaaattatgcacattacaattggttatatcattatattgat 440

                                                                       
Query: 240 tacagaaatctagagaatatcttgataagaaaaacatatggtttgtagttctggtttcat 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacagaaatctagagaatatcttgataagaaaaacatatggtttgtagttctggtttcat 500

                                                                       
Query: 300 gttagaatgttaagccctttcatagggagagaaatgttatgatgtcctatgcaagtagga 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttagaatgttaagccctttcatagggagagaaatgttatgatgtcctatgcaagtagga 560

                                                                       
Query: 360 agtaaaaataggtcatgttaatgcatgcttatttctgtctgaaaaccagggagggtacag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtaaaaataggtcatgttaatgcatgcttatttctgtctgaaaaccagggagggtacag 620

                                                                       
Query: 420 cattcacaagtatgagtataagtatgctggaaataagaatagaacataaacaaaatctga 479
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 cattcacaagtatgagtataagtatgctggaaataagaatagaacatgaacaaaatctga 680

                                                                       
Query: 480 aacaacattaagggtttattaattagctgtaatagatgattctaaacagtcaattctacc 539
           ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 681 aacaacattaagggtttattaattagccgtaatagatgattctaaacaatcaattctacc 740

                                                
Query: 540 tgttgggaggaggaaaatgaagttctaatatattgct 576
           |||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgttgggaggaggaaaatgaagttctaatatattgct 777


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 977
Length adjustment: 10
Effective length of query: 566
Effective length of database: 967
Effective search space:   547322
Effective search space used:   547322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)