XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGGATTA
CAAGCTTTAAAAAGACTAAATGAACTTATTAGACCTAAGAGATTTGTAGC
AGCTTTGATCCTGGGAATTACTGCTTTAATTGCTATTTTAACTTCCTTTA
CGTTATCCACCACAGCCTTAGTACAGCAACAACATACTGCTCACTTTGTT
AATGACATGCATAAGAATATCTCTGTAGCTTTGTCAGAGCTGTATTTTAT
AGATAAAAAATTAAAAGCAAAGGTTAACGCCCTAAAAGAAGTCGTGCTGG
CAATAGGACAAGATATTGCTAATATCAAGACCAGGTTAGCTACTAAATGT
CATGCTTCTTTTCTATACATTTATGTCACTCCTTTACCTTACAACCACTG
ATTAGGAAAAGACAAAAACTCATTTACAGGGTATATGGAAAGATACTGAT
ATTTCTCATGACTTAGAACAGTTAAAGGTAAAAATTTCAGATATTAGTAA
AAGCCATCTGGACACTTGGAACATTGATGAATTGGCTAGAGATTTAAAGA
ACAACTTAAGTGCATTAAACCCTCTGGATTGGGTTCAATATATTATCCTA
CTTGTTATTATTTTTGGCATTACTTTATTAGTAATCATTGTGTTTCCACT
CATCTTTAGAGAGCTCCTGAGATCTGTAGCTACCACGAAGCGGGACATCC
TGGAACTTCTGCTGAGAAATAAAGATATATTATCTATTATTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCTTTCTTAAGCAGGGGTAAGTCTTGACAACCACTGA
AGCACAATCTGGAAACATCAAGCCATAAAAATAATTGGATTAGTAAATAC
AAATCTAAATGCAGTGTAACCGAGCAGGATTTTAAAAAGCCAGTCAACAC
AAACGACTTAGTATCTGTGTGCTTATCAATGGTACTTAATGTACTTGATG
ACTTAGTTCCCTCTAATGTTTGATTAGCTCTCTATTTCGTATGTAGCAAG
CTAATAACATCTGGGCAGGCTCAGAGCAGAAATGAGAATACAGAAACCCT
GGAAACTAAGCACAGACGAATGTAGTAGTAATATTGCTACATAAAACAGG
TTAGGAACCTCAACACTGCGGGATTTAATATTCATCATTAGCATTGGTAG
ATAAAGTAGAGAGTTCCCAGTAAGAACTACATCTCCAATTAGACAAAAAA
TAATTTGTTAATATATACATATTCTGTACAATATTGTGGTGTGATATATT
GATCTGTTAGACAGTCTCACAATTTTTACCTCAAGGCATCTGCTTGATTA
TAGCCTAGATGTCATTAGTAACCATAAAAGCTAGAAACATACTTTGTAAT
GCTGGTTTATTTGAGAAGTTTTCTACATGTCTACACAAATCAATATTGAG
ATACTATGTGACACAAATAGAAAAGATACCAAATTCTATTATTN

Query= MSMg01no538_f16.g1 MSMg01no538_f16.g1 CHROMAT_FILE:
MSMg01no538_f16.g1 PHD_FILE: MSMg01no538_f16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:59 2005
         (620 letters)



>mm_chr3_45216174_45217193
          Length = 1020

 Score = 1199 bits (620), Expect = 0.0
 Identities = 620/620 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctttcttaagcaggggtaagtcttgacaaccactgaagcacaatctggaaacatcaagcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 ctttcttaagcaggggtaagtcttgacaaccactgaagcacaatctggaaacatcaagcc 761

                                                                       
Query: 61  ataaaaataattggattagtaaatacaaatctaaatgcagtgtaaccgagcaggatttta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 ataaaaataattggattagtaaatacaaatctaaatgcagtgtaaccgagcaggatttta 701

                                                                       
Query: 121 aaaagccagtcaacacaaacgacttagtatctgtgtgcttatcaatggtacttaatgtac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 aaaagccagtcaacacaaacgacttagtatctgtgtgcttatcaatggtacttaatgtac 641

                                                                       
Query: 181 ttgatgacttagttccctctaatgtttgattagctctctatttcgtatgtagcaagctaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ttgatgacttagttccctctaatgtttgattagctctctatttcgtatgtagcaagctaa 581

                                                                       
Query: 241 taacatctgggcaggctcagagcagaaatgagaatacagaaaccctggaaactaagcaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 taacatctgggcaggctcagagcagaaatgagaatacagaaaccctggaaactaagcaca 521

                                                                       
Query: 301 gacgaatgtagtagtaatattgctacataaaacaggttaggaacctcaacactgcgggat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gacgaatgtagtagtaatattgctacataaaacaggttaggaacctcaacactgcgggat 461

                                                                       
Query: 361 ttaatattcatcattagcattggtagataaagtagagagttcccagtaagaactacatct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ttaatattcatcattagcattggtagataaagtagagagttcccagtaagaactacatct 401

                                                                       
Query: 421 ccaattagacaaaaaataatttgttaatatatacatattctgtacaatattgtggtgtga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ccaattagacaaaaaataatttgttaatatatacatattctgtacaatattgtggtgtga 341

                                                                       
Query: 481 tatattgatctgttagacagtctcacaatttttacctcaaggcatctgcttgattatagc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tatattgatctgttagacagtctcacaatttttacctcaaggcatctgcttgattatagc 281

                                                                       
Query: 541 ctagatgtcattagtaaccataaaagctagaaacatactttgtaatgctggtttatttga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ctagatgtcattagtaaccataaaagctagaaacatactttgtaatgctggtttatttga 221

                               
Query: 601 gaagttttctacatgtctac 620
           ||||||||||||||||||||
Sbjct: 220 gaagttttctacatgtctac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space:   616100
Effective search space used:   616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)