Query= MSMg01no540_m18.b1 MSMg01no540_m18.b1 CHROMAT_FILE:
MSMg01no540_m18.b1 PHD_FILE: MSMg01no540_m18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:12 2005
(645 letters)
>mm_chr3_131037663_131038707
Length = 1045
Score = 1123 bits (581), Expect = 0.0
Identities = 626/641 (97%)
Strand = Plus / Minus
Query: 5 gaattcgggacacgttgctgcaggttacattgacaggatgtacgaatgctgcagataggg 64
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 845 gaattcggggcacgttgctgcaggttagattgacaggatgtacgaatgctgcagataggg 786
Query: 65 cttaaaagggaaaactcaaggagaacgccagacgtccagacattggaaagatggaggagc 124
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 785 cttaaaggggaaaactcaaggagaacgccagacatccagacattggaaagatggaggagc 726
Query: 125 ctttgctgctgtggaagctgtctgaaatgaagttacggctttctcacatagcatccagcc 184
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 725 ctttgctgctgtggaatctgtctgaaatgaagttacggcttcctcacatagcatccagcc 666
Query: 185 gcaggagggccactcttcacctcagacacccgtgcaccctggtgtatgaaatggaaactt 244
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 665 gcaggagggccactcttcacctcagacacccgtgcaccctggtgtatgaaacggaaactt 606
Query: 245 acagatcatgtgctttctggacgagggaaggaaggctaacatcagacttcactgaacact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 acagatcatgtgctttctggacgagggaaggaaggctaacatcagacttcactgaacact 546
Query: 305 aagcagatgttgagggaaggaaggcagagcgattctggagaagccagccagccgtctccc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 545 aagcagatgttgagggaaggaaggcagagcgattctggagaagccagccagccatctccc 486
Query: 365 ttaccaaacataggtgtggtttgggaaggcagtcatttcctaaagccatcaaagcagtac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttaccaaacataggtgtggtttgggaaggcagtcatttcctaaagccatcaaagcagtac 426
Query: 425 gtgtctgtaattaagacggtgtacatattgaatttaaacactggatggctttgactgaaa 484
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 425 gtgtctgtaattaagacggtgtacatattgaatttaaacactggctgactttgactgaaa 366
Query: 485 ctaatttaagacatgagagttcagaagcttaatgagcatgtctgagcccttactacggaa 544
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctaatttaagacatgagagttcaaaagcttaatgagcatgtctgagcccttactacggaa 306
Query: 545 cactgttaccgtgtattcagtggtgaggtggccgcggcagagaggagggcaaacccttcc 604
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cactgttaccgtgtgttcattggtgaggtggccgcggcagagaggagggcaaacccttcc 246
Query: 605 caggaatggatgaggttagcagagaatggcgactgattata 645
|||||||||||||||||||||||||| |||||||||||||
Sbjct: 245 caggaatggatgaggttagcagagaaaagcgactgattata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no540_m18.g1 MSMg01no540_m18.g1 CHROMAT_FILE:
MSMg01no540_m18.g1 PHD_FILE: MSMg01no540_m18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:12 2005
(651 letters)
>mm_chr3_130879875_130880927
Length = 1053
Score = 1151 bits (595), Expect = 0.0
Identities = 638/653 (97%), Gaps = 2/653 (0%)
Strand = Plus / Plus
Query: 1 acctgaaaaa--aaaaaagtctgaattctagaacccatcgtagattgtctcagagatgtg 58
|||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 acctgaaaaaagaaaaaagtctgaattctagaacccatggtagattgtctcagagatgtg 260
Query: 59 cggcttgaggtttggaacatagagatttatctgttggtccttttccccgtatccaccccg 118
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 261 cggcttgaggtttggaacatagagatttatctgtcggtccttttccctgtatccaccccg 320
Query: 119 cagagcactttctgagcaaatgtatgtggctggactttaattgtgttgctcattaatcct 178
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 cagagcactttctgagcagatgtatgtggcaggactttaattgtgttgctcattaatcct 380
Query: 179 tgctgtaatccagtcagccagtatctgctgatttttgcaaacgaggaaaccaattttgga 238
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 tgctgtaatccagtcagccagtatctgctggtttttgcaaacgaggaaaccaattttgga 440
Query: 239 gaactaaggggattaccaagtgtaagaactgacacgcacttgcacgctgggatttgaact 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaactaaggggattaccaagtgtaagaactgacacgcacttgcacgctgggatttgaact 500
Query: 299 ctgccctagtgcctccatgtcttaatattaaactgtgtcgttcctggtggctggcacgtg 358
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 ctgccctagtgcctccatgtcttaatattaaactgtgttgttcctggtggctggcacgtg 560
Query: 359 acagccagaggatgccaggcctacccggtgttgatctacagtatacaagctgtagatcta 418
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 acagccagaggatgccaggcctacctggtgttgatctacagtatacaagctgtagatcta 620
Query: 419 tcttgactgtctaacttaaggttctgtgtaatcatacataagtgatctatcttaggactt 478
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 621 tcttgactgtctaacttaaggttctgtgtaatcatatataaatgatctatcttaggactt 680
Query: 479 atcttagcatttcctataaggctggccaggttccatcaccttctgacaacatgaagagtc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atcttagcatttcctataaggctggccaggttccatcaccttctgacaacatgaagagtc 740
Query: 539 ataggtgctttgtgcttttttccctgcctttgtcttaaagcagcacattcactagtctgt 598
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ataggtgcttcgtgctttttttcctgcctttgtcttaaagcagcacattcactagtctgt 800
Query: 599 tggagatctgctggtgatggtaccggctttctccaagctaccgtttgttcctg 651
|||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 801 tggagatctgctggtggtggtaccggctttctccaagctaccgtttgttcctg 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1053
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1043
Effective search space: 668563
Effective search space used: 668563
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
