CAAATATTGGGGGGCGTATAACACTCCCTTAAGGTTTCAGGAAACCCGGG
AAGTTTTTTTTTGCTCTTCTCCCAAAAGGGTTTTTTAAAAGGAGGGTGGG
GTGGTGGGATTTCCTTCCCCCCCCNGNNCCCGGGCGGGAGAAAAAGAGAG
AGGCGGGATTACTAACCCCGCGCCCTTTTTTTTGGAGCACCTCGTTCTCT
CATAAAAAAAAAAAAGAAAGCCCGGGGGGGGGGGGGGGAAACTTCCCCAA
AAAACCTTTCCCTCCCCACATTTTTTAATAAAACCGGGCCTCTCTCCCCG
CCTTCTCTTGGAGGGGGGCGGGGCGCCCCCTTCTTGCTTTTTGTTTTTCT
TAAAAATAAGAAAATAGGCCTTTCTTTGGGCCCCCGCCCTGTAAAGGTAA
AACACAAATTCTCCCCTCTGGACACGGCTCGCCTTCCCCTCGGGTGTAAT
AAAAAAATAATCCTCTCCCCCCCCCGGTTTTGTGGGCCGGAAAAATCTAT
CCCTATAATAAAACTTTGCCCCCCCCGGGGCTTGGAATTTTTGTGGGAGT
TTAATAATGGGGGGGGTTTTATGTGGGAAATATAACAATACTTGTCCCGC
AATTTATAAAAAAAAAAAAATAGGGGGCNATTTTGAGCCCTCTATTCCCC
TACCCCAAAGAAAACACTTTTCCCCACAAGATTGTGTTGTTTCCCCTCTC
TCCTCGGGGAGAATACTCAATTTCTCTATATAAGGTCTCCCTCTTTCCCA
AAAAAAATTTCTCGAACATTTCCCACACTCTTGTGGGGAGAGGAATATAA
AAAAAATAAAAAAAGGCCTTTTTTTGGTGTCCCTCCTCCTGTGGGCTCCT
TCTCCACACCCCGGGAAAACCAGAATCTTTTTCTTAAAAAAAAAAAAGGG
GGTGAGGGGGGAATAAAAAAGGTAATACACCCACCGCTTGAAGAAATCTT
CCCCTCCTCTCTCTTTTTATAAATCACAAACCCCCCCCATATATTTTTCT
CCCCCAAATTTT

CATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTTAAAGCATCAGTCATCAGTCCGCTGG
GTAAGCATGTATCTTGACTGTAAAATTCCTGTAGAAAATTAGGAACTTAA
CCATGGTCTGTGGGTTATTAGGCAGAAAGGCAGCTCTGGGAAGGGAAGAT
CAAATAAATTCTCAACAAAACAAAACAAACAAAAAAACCAAACAAAACCA
TACAACAACAAAGCACACTTGGGAGTGGGTGATTCTAGCTTGGTTATTTT
GAACTGGTTTCAGATTTTACCTGCCAGGAAAGCACGGACGTACGTGTGCC
TGATTCCTTTTCCCCCTGTGAAAATGTCAAAAACAGAGACGCTTACGGCT
CTTATTAATTCATGGCTTAAACATATACCCGCACGTTGTATGTATAGTTT
GTCTAATTCTGAGTAAACGGGCTTCTAAGAACGTGCTCCTACCTGGAAGT
GTCCACCCTGAGGCAGGACAGAGAAAGGAATATAAAACTGCTCTTATTCT
AAAGAGTGTATTGCTGTTTCCGTGTTGGTTAAATATAGACTCGGACTGCG
TGCTCTGTTTGCTGTGTCCTGTTTGAACTCGGCTCTTTCAGGGATACAAG
AAGTTAAGGCCAAGAAAACTGGAGACCCAGTCCTCAAGGTAGCCATCAGC
TTACGCCCCTTCCCTTATCTACCCCTATCCCCATCACCACATTCCAGCTC
TGGTTCTGTCN

Query= MSMg01no542_m01.g1 MSMg01no542_m01.g1 CHROMAT_FILE:
MSMg01no542_m01.g1 PHD_FILE: MSMg01no542_m01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:53 2005
         (589 letters)



>mm_chr3_57425379_57426367
          Length = 989

 Score = 1077 bits (557), Expect = 0.0
 Identities = 581/589 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttaaagcatcagtcatcagtccgctgggtaagcatgtatcttgactgtaaaattcctgt 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tttaaagcatcagtcatcagtccgctgggtaagcatgtatcttgattgtaaaattcctgt 260

                                                                       
Query: 61  agaaaattaggaacttaaccatggtctgtgggttattaggcagaaaggcagctctgggaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaattaggaacttaaccatggtctgtgggttattaggcagaaaggcagctctgggaa 320

                                                                       
Query: 121 gggaagatcaaataaattctcaacaaaacaaaacaaacaaaaaaaccaaacaaaaccata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaagatcaaataaattctcaacaaaacaaaacaaacaaaaaaaccaaacaaaaccata 380

                                                                       
Query: 181 caacaacaaagcacacttgggagtgggtgattctagcttggttattttgaactggtttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 caacaacaaagcacacttgggagtgggtgattctagcttggttattttgaattggtttca 440

                                                                       
Query: 241 gattttacctgccaggaaagcacggacgtacgtgtgcctgattccttttccccctgtgaa 300
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 gattttacctgccaggaaagcacgaacgtacgtgtgcctgattccttttccccctgtgaa 500

                                                                       
Query: 301 aatgtcaaaaacagagacgcttacggctcttattaattcatggcttaaacatatacccgc 360
           |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 501 aatgtcaaaaacagagacgcttacggctcttattaatttatggcttaaacatatactcgc 560

                                                                       
Query: 361 acgttgtatgtatagtttgtctaattctgagtaaacgggcttctaagaacgtgctcctac 420
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 acgttgtatgtatagtttgtctaattctgagtaaatgggcttctaagaacgtgctcctac 620

                                                                       
Query: 421 ctggaagtgtccaccctgaggcaggacagagaaaggaatataaaactgctcttattctaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctggaagtgtccaccctgaggcaggacagagaaaggaatataaaactgctcttattctaa 680

                                                                       
Query: 481 agagtgtattgctgtttccgtgttggttaaatatagactcggactgcgtgctctgtttgc 540
           ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 681 agagtgtgttgctgtttccgtgttggttaaatttagactcggactgcgtgctctgtttgc 740

                                                            
Query: 541 tgtgtcctgtttgaactcggctctttcagggatacaagaagttaaggcc 589
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtgtcctgtttgaactcggctctttcagggatacaagaagttaaggcc 789


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space:   566841
Effective search space used:   566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)