Query= MSMg01no547_e22.b1 MSMg01no547_e22.b1 CHROMAT_FILE:
MSMg01no547_e22.b1 PHD_FILE: MSMg01no547_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:54 2005
(645 letters)
>mm_chr3_146784753_146785796
Length = 1044
Score = 1156 bits (598), Expect = 0.0
Identities = 631/642 (98%), Gaps = 1/642 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactcttgggaaggacttcctcattttcctctgtaattcaaagtatgagactgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 204 ggaattcactcttgggaaggacttcctcattttcctctgtaattcaaagtacgagactgt 263
Query: 64 cgcttctgtccttaggcatttcagtaactttttcctcttcagaccaaggtcaaaaggctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cgcttctgtccttaggcatttcagtaactttttcctcttcagaccaaggtcaaaaggctc 323
Query: 124 cggttgttagactccaagaaggtgtgagaatatacgaggctgcacaccatgtatatttat 183
| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 324 ccgttgttagactccaagaaggtgtgagaatatacgtggctgcacaccatgcatatttat 383
Query: 184 gctgcacagccattaaagcaaatataggagggatgaatttttaagaaccgagttaagact 243
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 384 gctgcacagccattaaagcaaatataagagggatgaatttttaagaaccgagttaagact 443
Query: 244 gaaaaaagagttgtttggacattgtctgttttatacttttatgaacttacataatgcagg 303
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaaaaa-gagttgtttggacattgtctgttttatacttttatgaacttacataatgcagg 502
Query: 304 cgaagggagagaaaatacacttagtcttgcacctgagcaagctccttacgaatgaaaagt 363
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 503 cgaagggagagaaaatacacttagtcttgcacctgagcaaactccttacgaataaaaagt 562
Query: 364 ctaagagtaaagatataaatatccataaagatggcgttgtcttcccttatctgtagggtt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctaagagtaaagatataaatatccataaagatggcgttgtcttcccttatctgtagggtt 622
Query: 424 tggtgccaggaccgtgtctatatccaggcccttatagagtcaagtctcttatataaagca 483
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tggtgccaggaccatgtctatatccaggcccttatagagtcaagtctcttatataaagca 682
Query: 484 gtacaggattcgaatagaacctatacacaacatcctgtttactttgaatcatgtctagat 543
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtacaggattcgcacagaacctatacacaacatcctgtttactttgaatcatgtctagat 742
Query: 544 tacttgtaatacttagtataatgtgaatatgttatgtttaattaatgattaataatattt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tacttgtaatacttagtataatgtgaatatgttatgtttaattaatgattaataatattt 802
Query: 604 agatagctctactatattatttaacaaatgatggcaaggaat 645
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 agatagctctactatattatttaacaaatgatggcaaggaat 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1044
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1034
Effective search space: 656590
Effective search space used: 656590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_e22.g1 MSMg01no547_e22.g1 CHROMAT_FILE:
MSMg01no547_e22.g1 PHD_FILE: MSMg01no547_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:54 2005
(660 letters)
>mm_chr3_146961774_146962832
Length = 1059
Score = 1154 bits (597), Expect = 0.0
Identities = 649/681 (95%), Gaps = 26/681 (3%)
Strand = Plus / Minus
Query: 1 caaagaaatgtgtggggagagagagagagaaagaaagagacagaaagacagacagacaga 60
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 748 caaagaaatgtgtggggagagagggagagaaagaaagagacagaa----agacagacaga 693
Query: 61 cagacagacagacagacagacaacagacagagatggagatagag---------------- 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 cagacagacagacagacagacaacagacagagatggagatagagacagtgacagatagag 633
Query: 105 ----acagagatagagagacagacagacagaatgcctgcctgcctttactactgctgctt 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 acaaacagagatagagagacagacagacagaatgcctgcctgcctttactactgctgctt 573
Query: 161 gtagtactactacaaccttgattgacatcagacactaacttcatgatcttcccacgtggc 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gtagtactactacaaccttgattgacatcagacactaacttcatgatcttcccacgtggc 513
Query: 221 ctcactatggaactcactcatggaacttttactcccagatcttgtcttgctgaagcatcc 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ctcactatggaactcactcatggaacttttactcccagatcttgtcttgctgaagcatcc 453
Query: 281 caatgcttggccctgagcatcaactgagttccttaaatctgcaacttggaaatgtctact 340
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 452 caatgcttgg-cctgagcatcaactgagtcccttaaatctgcaacttggaaatgtctact 394
Query: 341 gttgggctactccagcaccatcttataagccagtcttataattcaccatttgttgtttat 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gttgggctactccagcaccatcttataagccagtcttataattcaccatttgttgtttat 334
Query: 401 gaatatacatatatgtatatacacattcatatatctacacacatatgtagatgtatatgt 460
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gaatatacatatatgtatatgcacattcatatatctacacacatatgtagatgtatatgt 274
Query: 461 aatgtgtgtatgtaaccttatattatatatacaaatgtgtatataagagaatatacattt 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aatgtgtgtatgtaaccttatattatatatacaaatgtgtatataagagaatatacattt 214
Query: 521 cttttttcccaacataatattaatgaatactaatcaatgttttattatttgagaatttcc 580
||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||
Sbjct: 213 cttttttcccaacataatattaatgaatactaatcgatgttctaatatttgagaatttcc 154
Query: 581 tacaatgcagcttgattgtcctaagcttctcatctctgccagttccaccccctacactta 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 tacaatgcagcttgattgtcctaagcttctcatctctgccagttccaccccctacactta 94
Query: 641 caccctcccttc-tttaaaaa 660
|||||||||||| ||||||||
Sbjct: 93 caccctcccttcctttaaaaa 73
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1059
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1049
Effective search space: 681850
Effective search space used: 681850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
