XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCACCTGA
GGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGCTCAACATCCTTAA
TCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCA
GTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGG
ATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTG
TACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAACTGGATATA
GTACTACCTGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGA
TGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCT
TATTTATAATAGCCAGAAGCTGGAAGGAACCCAGATGCCCCTCAACAGAG
GAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTACTCAGC
TATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGG
AGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACTCACACAAT
ATGTACTCACTGATAAGTGGATATTAGCCCAAAACCTAAGATACCCAAGA
TATAAGATACAATTTCCTAAACACATGAAACTCAAGAAAAATGAAGACTG
AAGTGTGAACACTATGCCCCTCCTTAGAAGTGGGAACAAAACACCCTTGT
GAGGAGTTACAGA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
TTCGCAATTCTGTGTTGATGTTTTTGTAGTAGTTTCTTCCCTGTGATTTA
GTGAAGTTGTGATGCTTTCAGTTCACTTGAATAGGGAGTTTGGCTCTGAT
TTGATTAATCGTGTGACAGTTTGTGCTTTTGCTATCCTAGAGGGACAGTA
AAATAAGATTTAGTTGTGAAGATATGTATAGTATAGAATTTCATAAAGTC
TTATCTCATAAAATGCCTGAATAACTTTCCAAGTGGTAAGAAAGTAAAAA
AAAAAAAAAGAAGAATATACGACAAAAATAATAAAGAAGAGCCTGTTATT
GAAGGCCTGCTTGCTGTTGGAACACAGAAACAGCCACGTGAATGTGGAGA
CAATCTCCATGAAACTGCCCATTCGAAGACACAGTTACTTTTTCCAGTTG
ATTTGTGGGATGGCCTTCAAATGGAGGTGACATTCTTAGCATCACAGCAT
CATTGTCAGTGATATTCTGACTCAGAGATCCCAGTCATTACGCATACTGA
AAGAACAGGTCTTTGAACAGGTTATTCTAGGCATTAAAATGTTATGACTT
CCATTTATATTTCAGAACCATACAGTTTTAATCAAATGTACAACATTTAC
CTAAAAGCCAACCTTCATTGATTTGTATAACTATTGTTAGGGAATATCAA
TTGTAGGACAATGGATATCAACCAACATGCAATAATGAGACTCTCCCAAC
CAACCAACA

Query= MSMg01no547_l09.g1 MSMg01no547_l09.g1 CHROMAT_FILE:
MSMg01no547_l09.g1 PHD_FILE: MSMg01no547_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:25 2005
         (709 letters)



>mm_chr3_48529566_48530674
          Length = 1109

 Score = 1361 bits (704), Expect = 0.0
 Identities = 704/704 (100%)
 Strand = Plus / Minus

                                                                       
Query: 6   aattctgtgttgatgtttttgtagtagtttcttccctgtgatttagtgaagttgtgatgc 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 aattctgtgttgatgtttttgtagtagtttcttccctgtgatttagtgaagttgtgatgc 850

                                                                       
Query: 66  tttcagttcacttgaatagggagtttggctctgatttgattaatcgtgtgacagtttgtg 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 tttcagttcacttgaatagggagtttggctctgatttgattaatcgtgtgacagtttgtg 790

                                                                       
Query: 126 cttttgctatcctagagggacagtaaaataagatttagttgtgaagatatgtatagtata 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 cttttgctatcctagagggacagtaaaataagatttagttgtgaagatatgtatagtata 730

                                                                       
Query: 186 gaatttcataaagtcttatctcataaaatgcctgaataactttccaagtggtaagaaagt 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gaatttcataaagtcttatctcataaaatgcctgaataactttccaagtggtaagaaagt 670

                                                                       
Query: 246 aaaaaaaaaaaaaagaagaatatacgacaaaaataataaagaagagcctgttattgaagg 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aaaaaaaaaaaaaagaagaatatacgacaaaaataataaagaagagcctgttattgaagg 610

                                                                       
Query: 306 cctgcttgctgttggaacacagaaacagccacgtgaatgtggagacaatctccatgaaac 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cctgcttgctgttggaacacagaaacagccacgtgaatgtggagacaatctccatgaaac 550

                                                                       
Query: 366 tgcccattcgaagacacagttactttttccagttgatttgtgggatggccttcaaatgga 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tgcccattcgaagacacagttactttttccagttgatttgtgggatggccttcaaatgga 490

                                                                       
Query: 426 ggtgacattcttagcatcacagcatcattgtcagtgatattctgactcagagatcccagt 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ggtgacattcttagcatcacagcatcattgtcagtgatattctgactcagagatcccagt 430

                                                                       
Query: 486 cattacgcatactgaaagaacaggtctttgaacaggttattctaggcattaaaatgttat 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cattacgcatactgaaagaacaggtctttgaacaggttattctaggcattaaaatgttat 370

                                                                       
Query: 546 gacttccatttatatttcagaaccatacagttttaatcaaatgtacaacatttacctaaa 605
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gacttccatttatatttcagaaccatacagttttaatcaaatgtacaacatttacctaaa 310

                                                                       
Query: 606 agccaaccttcattgatttgtataactattgttagggaatatcaattgtaggacaatgga 665
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 agccaaccttcattgatttgtataactattgttagggaatatcaattgtaggacaatgga 250

                                                       
Query: 666 tatcaaccaacatgcaataatgagactctcccaaccaaccaaca 709
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tatcaaccaacatgcaataatgagactctcccaaccaaccaaca 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 709
Length of database: 1109
Length adjustment: 10
Effective length of query: 699
Effective length of database: 1099
Effective search space:   768201
Effective search space used:   768201
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)