BAC Information

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BAC

Clone NameB6Ng01-002P15
Chromosome4 (Build37)
Map Location 27,304,577 - 27,461,429
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665079, Gng2-ps1
Downstream geneLOC100040691, Tpm3-rs2, LOC100040842, LOC100040735, LOC230044, LOC665141
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002P15.bB6Ng01-002P15.g
ACCDH840840DH840841
length3941,122
definitionDH840840|Mus musculus domesticus DNA, BAC clone: B6Ng01-002P15, 5' end.DH840841|Mus musculus domesticus DNA, BAC clone: B6Ng01-002P15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,304,577 - 27,304,970)(27,460,293 - 27,461,429)
sequence
gaattcagcttttaaagtaaactaatagtgttagtataatttttgcataa
ttcattttgaagaaaaaaatcatgactgttctcaaaagcctgtgaccaag
agatgcagccttaccaacactgcttgagtgaccaagaacttgagactata
tagcctaagaaccaaaagaaaatgcaaataatagtgatttaaaaaggaat
atgtagtaataaaatgattcctaatgatattttgctatactttcagatta
gtgccttaatcagatatcaggagagtagcttcctctggccgcaagtggga
ccaaataaagagacccacaatcatacgttatgagagagagtgagagagag
agagagagagagagagagagagaggagagaggagagaggagaga
gaattctcacctgaggaataccgaatggcagagaagtacctgagattatt
attcttgatagctttgtatacatatcacatgttgccttagtttggacttc
catttccaaagtaaatattgttaaaagaaaaaaaaacaacatttaattgg
ggctgtcttagtgtttcagaggctcagcccattatcatggtgagaagaac
agtagtgtacaggcaggcatggtctaatatcttgatcagcaggagactgg
atttcatacttgctacaacaaggacacatctcctaatagtacattcctca
gaggccaagaatttattcacatgaatatacgggggaggggcaaacctatt
aaagtgaccacacgtgttaaagataaagcaaaggaatagatactatgttt
ttaattaaaatttgaatttttaaaatagtttccacacaattgtttggttt
tacttatgatctagggagcaagtgcattattaaataaagtattaactgca
tatacacaatgaccatgcaaatactgcttgagtaggttaggtgtgttcct
gaaaaacaatgttttttgttttttgttttgtttttttttttttttttggt
tttttgagacaggttttctctgtatagccctgtctgtcctggaactcact
ttgtagaccaggctggcctcgaactcagaaatctgcctgcctctgcctcc
cgagtgctgggattaaaggcgtgcgccaccatgcccggcttgaaaaacat
tttcaatcttcagcaacctcttttaatttttctctattttcattgactaa
tgaagccagctggctcactaaatttcataatataaaaacagtggaaataa
aacattaactatgttcaggtcataaaggatctgttgcaaactttcctttt
aaaatgaaaatataaagcagtgttcatttaatcttgcctcagagcagact
catatgacacatgggtgagagatggttcattcgtgcagaagtccttgact
atcaccaaacctcagaaagatgaatagcttctgacaggtatttttaatac
ttgaaactgaccaatcgctagaacataagcaggagtactgttcaaagcag
ccaggaagctcaagttgaggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_27304577_27304970
seq2: B6Ng01-002P15.b_45_438

seq1  GAATTCAGCTTTTAAAGTAAACTAATAGTGTTAGTATAATTTTTGCATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTTTTAAAGTAAACTAATAGTGTTAGTATAATTTTTGCATAA  50

seq1  TTCATTTTGAAGAAAAAAATCATGACTGTTCTCAAAAGCCTGTGACCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTGAAGAAAAAAATCATGACTGTTCTCAAAAGCCTGTGACCAAG  100

seq1  AGATGCAGCCTTACCAACACTGCTTGAGTGACCAAGAACTTGAGACTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAGCCTTACCAACACTGCTTGAGTGACCAAGAACTTGAGACTATA  150

seq1  TAGCCTAAGAACCAAAAGAAAATGCAAATAATAGTGATTTAAAAAGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTAAGAACCAAAAGAAAATGCAAATAATAGTGATTTAAAAAGGAAT  200

seq1  ATGTAGTAATAAAATGATTCCTAATGATATTTTGCTATACTTTCAGATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTAATAAAATGATTCCTAATGATATTTTGCTATACTTTCAGATTA  250

seq1  GTGCCTTAATCAGATATCAGGAGAGTAGCTTCCTCTGGCCGCAAGTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTAATCAGATATCAGGAGAGTAGCTTCCTCTGGCCGCAAGTGGGA  300

seq1  CCAAATAAAGAGACCCACAATCATACGTTATGAGAGAGAGTGAGAGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAAAGAGACCCACAATCATACGTTATGAGAGAGAGTGAGAGAGAG  350

seq1  AGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGGAGAGAGGAGAGA  394
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGGAGAGAGGAGAGA  394

seq1: chr4_27460293_27461429
seq2: B6Ng01-002P15.g_69_1190 (reverse)

seq1  CTCCTCCATCACTTGAGCATCTCTTGCTGCTATTGAACATGATACTTCCT  50
      ||||||    |||||||| || || |||||| |||||||   ||| ||||
seq2  CTCCTC---AACTTGAGCTTC-CTGGCTGCT-TTGAACA--GTAC-TCCT  42

seq1  GCCTTTATGGTCTAGCGATTGGTCAGTTTCAAGTATT-AAAATACCTTGT  99
      ||  ||||| ||||||||||||||||||||||||||| |||||||| |||
seq2  GC--TTATGTTCTAGCGATTGGTCAGTTTCAAGTATTAAAAATACC-TGT  89

seq1  CAGAAGCTA-TCATCTTTTCTTGAGGTTTGGTGATAGTC-AGGGCTTCTG  147
      ||||||||| ||||||||   |||||||||||||||||| ||| ||||||
seq2  CAGAAGCTATTCATCTTT--CTGAGGTTTGGTGATAGTCAAGGACTTCTG  137

seq1  CACTGAATGAACCATCTTCTCACCCAATGTTGTCATATTGAGTCTGCTCT  197
      ||| |||||||||||| |||||||| ||| ||||||| ||||||||||||
seq2  CAC-GAATGAACCATC-TCTCACCC-ATG-TGTCATA-TGAGTCTGCTCT  182

seq1  GAGGCAAGCATAAATGAACACTGCTTTATATTTTCATTTTAAAAGGAAAG  247
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAGATTAAATGAACACTGCTTTATATTTTCATTTTAAAAGGAAAG  232

seq1  TTTGCAACAGATCCTTTATGACCTGGACATAGTTATTGTTTTATTTCCAC  297
      ||||||||||||||||||||||||| ||||||||| ||||||||||||||
seq2  TTTGCAACAGATCCTTTATGACCTGAACATAGTTAATGTTTTATTTCCAC  282

seq1  TGTTTTTATATTATGAAATTTAGTGAGCCAGCTGGCTTCATTAGTCAATG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTATATTATGAAATTTAGTGAGCCAGCTGGCTTCATTAGTCAATG  332

seq1  AAAATAGAGAAAAATTAAAAGAGGTTGCTGAAGATTGAAAATGTTTTTCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAGAAAAATTAAAAGAGGTTGCTGAAGATTGAAAATGTTTTTCA  382

seq1  AGCCGGGCATGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGGCATGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAG  432

seq1  GCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCC  482

seq1  AGGACAGACAGGGCTATACAGAGAAAACCTGTCTCAAAAAACCAAAAAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGACAGGGCTATACAGAGAAAACCTGTCTCAAAAAACCAAAAAAA  532

seq1  AAAAAAAAAACAAAACAAAAAACAAAAAACATTGTTTTTCAGGAACACAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAACAAAACAAAAAACAAAAAACATTGTTTTTCAGGAACACAC  582

seq1  CTAACCTACTCAAGCAGTATTTGCATGGTCATTGTGTATATGCAGTTAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCTACTCAAGCAGTATTTGCATGGTCATTGTGTATATGCAGTTAAT  632

seq1  ACTTTATTTAATAATGCACTTGCTCCCTAGATCATAAGTAAAACCAAACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTTAATAATGCACTTGCTCCCTAGATCATAAGTAAAACCAAACA  682

seq1  ATTGTGTGGAAACTATTTTAAAAATTCAAATTTTAATTAAAAACATAGTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTGGAAACTATTTTAAAAATTCAAATTTTAATTAAAAACATAGTA  732

seq1  TCTATTCCTTTGCTTTATCTTTAACACGTGTGGTCACTTTAATAGGTTTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCCTTTGCTTTATCTTTAACACGTGTGGTCACTTTAATAGGTTTG  782

seq1  CCCCTCCCCCGTATATTCATGTGAATAAATTCTTGGCCTCTGAGGAATGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCCCGTATATTCATGTGAATAAATTCTTGGCCTCTGAGGAATGT  832

seq1  ACTATTAGGAGATGTGTCCTTGTTGTAGCAAGTATGAAATCCAGTCTCCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTAGGAGATGTGTCCTTGTTGTAGCAAGTATGAAATCCAGTCTCCT  882

seq1  GCTGATCAAGATATTAGACCATGCCTGCCTGTACACTACTGTTCTTCTCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATCAAGATATTAGACCATGCCTGCCTGTACACTACTGTTCTTCTCA  932

seq1  CCATGATAATGGGCTGAGCCTCTGAAACACTAAGACAGCCCCAATTAAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATAATGGGCTGAGCCTCTGAAACACTAAGACAGCCCCAATTAAAT  982

seq1  GTTGTTTTTTTTTCTTTTAACAATATTTACTTTGGAAATGGAAGTCCAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTTTTTTCTTTTAACAATATTTACTTTGGAAATGGAAGTCCAAA  1032

seq1  CTAAGGCAACATGTGATATGTATACAAAGCTATCAAGAATAATAATCTCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGCAACATGTGATATGTATACAAAGCTATCAAGAATAATAATCTCA  1082

seq1  GGTACTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  1122