BAC Information

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BAC

Clone NameB6Ng01-005G03
Chromosome4 (Build37)
Map Location 5,817,303 - 6,008,872
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039338, 1700012H17Rik, LOC669309
Downstream gene3110003A22Rik, Cyp7a1, Sdcbp, Nsmaf, LOC100039397, LOC100039414, Tox, LOC100039421, LOC666700
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005G03.bB6Ng01-005G03.g
ACCDH842533DH842534
length8891,127
definitionDH842533|Mus musculus domesticus DNA, BAC clone: B6Ng01-005G03, 5' end.DH842534|Mus musculus domesticus DNA, BAC clone: B6Ng01-005G03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,007,981 - 6,008,872)(5,817,303 - 5,818,432)
sequence
gaattcaccttgttccctataaggaggcatgtgctcctttgtctggggtc
accattttgaagaatgattcacccccacatgctgattgatttagcagaat
aaacactctttgtctttgcattctgagtccggggtcttccttcagtgact
tttggacccttacaccatgttgtcaaagagagaatggactcataagagct
gttctccaatctccaaacgtgaggccgtccaccgccaaaataaataaata
taatttttaaaggaggaacttactataatattcattcctaagccattcct
tggacatctctggtgacatggttctgagttggagtcaggtcacctgagat
tttaggaagcaataatgtgcttttgtttaggaacataagtctccataaca
gatcctttctgttttatttcccagatagggacactccaggactgcacttt
tgtagtctgggtcctgggtcctgggtcctgggtcctgggtcctgggtcct
gggtcctgggtcctgggtcctgggtcctgggtcctgggtcctgggtcctg
ggtcctgggtcctgggtcctgggccctgggtcctgggtcctggggtgtat
ctgaaagcaagcttggccagccacagggagcaagctagagactagcactt
cccccacagcctctgtttcagttctttcctccaaaattcttctttgggtt
tctgcactaacttccctttatgatggagtgtaagctgcaaactgaaacaa
accttttcctccccaagttgcttttagttgtggtgctcattgtggaaaca
gagaagcgaatcatggcagaagagaaagggggaaaggaggaaaagtgagc
ataagatttaagaaagaagtaagtcagctttgttttccc

gaattcagggggaaaaaaagggagaagggggtatcaggttatgaaggaag
aagcaaaagaaaacttgactgtatttagaaaatcttcacatgttccaaat
ctcttagaactaataagatttcaacacaccttcaagatacacacacacac
acgcatgtgtgtgtgtgtgtataaacatatatacatacatatacaaatat
gtgcatatattacatatttaaattatacatacatatgcatatgtatatat
gtatatgtctgtatgtacatatacatataattacatatatgaaaatacag
aacagtttcatttgtgtatttataatagcatccaaagaataaaataggaa
ttaatttaagaaaaagtagatttttcattaaaatcagaaaatgttattca
aagaaatttaacatgttttaaaaatcttttacttatcatatattaatttc
acaagataatgagttttactaccttttttttcaagacaaggtttctctgt
gtagccttggctgtactggaacttactctgtagcccatgttggccttgaa
ctcacagagatcctcctgcctctgcctacttagtgctgggattaaaggtg
tgtgctaacactgcctggcttttattatcacatttttatacatgctattt
aaagtattatagtcacactcaccttattgctttttgctactgattcccct
actcaaaaagtcttaaatagaaatggattgttatcaaaggatcagaaaaa
taagtattgttcatatgaccggttgagaaaactagtacatccctacataa
atctgagaaggatgctttctctttccttaagacaaaaattctggagtttc
tctcaaaagccacatgaaagcaacagtagtcaaagaaaagcagaaaaatc
cagacaggaaagaaattagaatgcttactcttatacattgaaaccttaca
aagttatagtcatggatgtgatacagtactaccagacaaagatcatggac
tatcattgcaatctagaattaaatttcatgtgaacatgaaaattttatcc
ccagaggagaaggttctcgaattaatcgtgagaaattttgctagttactc
catatcctggtgttgtagccgagcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_6007981_6008872
seq2: B6Ng01-005G03.b_44_932 (reverse)

seq1  GGGAAAACAAAGCTGACTTACTTCTTTCTTTAAATCTTTATGCTCACTTT  50
      |||||||||||||||||||||||||||| ||||||| |||||||||| ||
seq2  GGGAAAACAAAGCTGACTTACTTCTTTC-TTAAATC-TTATGCTCAC-TT  47

seq1  TTCCTCCTTTCCCCCTTTCTCTTCTGCCATGATTCGCTTCTCTGTTTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTTTCCCCCTTTCTCTTCTGCCATGATTCGCTTCTCTGTTTCCA  97

seq1  CAATGAGCACCACAACTAAAAGCAACTTGGGGAGGAAAAGGTTTGTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGCACCACAACTAAAAGCAACTTGGGGAGGAAAAGGTTTGTTTCA  147

seq1  GTTTGCAGCTTACACTCCATCATAAAGGGAAGTTAGTGCAGAAACCCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCAGCTTACACTCCATCATAAAGGGAAGTTAGTGCAGAAACCCAAA  197

seq1  GAAGAATTTTGGAGGAAAGAACTGAAACAGAGGCTGTGGGGGAAGTGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTTTGGAGGAAAGAACTGAAACAGAGGCTGTGGGGGAAGTGCTA  247

seq1  GTCTCTAGCTTGCTCCCTGTGGCTGGCCAAGCTTGCTTTCAGATACACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAGCTTGCTCCCTGTGGCTGGCCAAGCTTGCTTTCAGATACACCC  297

seq1  CAGGACCCAGGACCCAGGGCCCAGGACCCAGGACCCAGGACCCAGGACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCCAGGACCCAGGGCCCAGGACCCAGGACCCAGGACCCAGGACCC  347

seq1  AGGACCCAGGACCCAGGACCCAGGACCCAGGACCCAGGACCCAGGACCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCAGGACCCAGGACCCAGGACCCAGGACCCAGGACCCAGGACCCA  397

seq1  GGACCCAGGACCCAGGACCCAGGACCCAGGACCCAGACTACAAAAGTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCAGGACCCAGGACCCAGGACCCAGGACCCAGACTACAAAAGTGCA  447

seq1  GTCCTGGAGTGTCCCTATCTGGGAAATAAAACAGAAAGGATCTGTTATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGAGTGTCCCTATCTGGGAAATAAAACAGAAAGGATCTGTTATGG  497

seq1  AGACTTATGTTCCTAAACAAAAGCACATTATTGCTTCCTAAAATCTCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTATGTTCCTAAACAAAAGCACATTATTGCTTCCTAAAATCTCAGG  547

seq1  TGACCTGACTCCAACTCAGAACCATGTCACCAGAGATGTCCAAGGAATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGACTCCAACTCAGAACCATGTCACCAGAGATGTCCAAGGAATGG  597

seq1  CTTAGGAATGAATATTATAGTAAGTTCCTCCTTTAAAAATTATATTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGAATGAATATTATAGTAAGTTCCTCCTTTAAAAATTATATTTATT  647

seq1  TATTTTGGCGGTGGACGGCCTCACGTTTGGAGATTGGAGAACAGCTCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGCGGTGGACGGCCTCACGTTTGGAGATTGGAGAACAGCTCTTA  697

seq1  TGAGTCCATTCTCTCTTTGACAACATGGTGTAAGGGTCCAAAAGTCACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCATTCTCTCTTTGACAACATGGTGTAAGGGTCCAAAAGTCACTG  747

seq1  AAGGAAGACCCCGGACTCAGAATGCAAAGACAAAGAGTGTTTATTCTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGACCCCGGACTCAGAATGCAAAGACAAAGAGTGTTTATTCTGCT  797

seq1  AAATCAATCAGCATGTGGGGGTGAATCATTCTTCAAAATGGTGACCCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATCAGCATGTGGGGGTGAATCATTCTTCAAAATGGTGACCCCAG  847

seq1  ACAAAGGAGCACATGCCTCCTTATAGGGAACAAGGTGAATTC  892
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGAGCACATGCCTCCTTATAGGGAACAAGGTGAATTC  889


seq1: chr4_5817303_5818432
seq2: B6Ng01-005G03.g_69_1195

seq1  GAATTCAGGGGGAAAAAAAGGGAGAAGGGGGTATCAGGTTATGAAGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGGGAAAAAAAGGGAGAAGGGGGTATCAGGTTATGAAGGAAG  50

seq1  AAGCAAAAGAAAACTTGACTGTATTTAGAAAATCTTCACATGTTCCAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAAGAAAACTTGACTGTATTTAGAAAATCTTCACATGTTCCAAAT  100

seq1  CTCTTAGAACTAATAAGATTTCAACACACCTTCAAGATACACACACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGAACTAATAAGATTTCAACACACCTTCAAGATACACACACACAC  150

seq1  ACGCATGTGTGTGTGTGTGTATAAACATATATACATACATATACAAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATGTGTGTGTGTGTGTATAAACATATATACATACATATACAAATAT  200

seq1  GTGCATATATTACATATTTAAATTATACATACATATGCATATGTATATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATATATTACATATTTAAATTATACATACATATGCATATGTATATAT  250

seq1  GTATATGTCTGTATGTACATATACATATAATTACATATATGAAAATACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGTCTGTATGTACATATACATATAATTACATATATGAAAATACAG  300

seq1  AACAGTTTCATTTGTGTATTTATAATAGCATCCAAAGAATAAAATAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTCATTTGTGTATTTATAATAGCATCCAAAGAATAAAATAGGAA  350

seq1  TTAATTTAAGAAAAAGTAGATTTTTCATTAAAATCAGAAAATGTTATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTAAGAAAAAGTAGATTTTTCATTAAAATCAGAAAATGTTATTCA  400

seq1  AAGAAATTTAACATGTTTTAAAAATCTTTTACTTATCATATATTAATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATTTAACATGTTTTAAAAATCTTTTACTTATCATATATTAATTTC  450

seq1  ACAAGATAATGAGTTTTACTACCTTTTTTTTCAAGACAAGGTTTCTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATAATGAGTTTTACTACCTTTTTTTTCAAGACAAGGTTTCTCTGT  500

seq1  GTAGCCTTGGCTGTACTGGAACTTACTCTGTAGCCCATGTTGGCCTTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTTGGCTGTACTGGAACTTACTCTGTAGCCCATGTTGGCCTTGAA  550

seq1  CTCACAGAGATCCTCCTGCCTCTGCCTACTTAGTGCTGGGATTAAAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGAGATCCTCCTGCCTCTGCCTACTTAGTGCTGGGATTAAAGGTG  600

seq1  TGTGCTAACACTGCCTGGCTTTTATTATCACATTTTTATACATGCTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTAACACTGCCTGGCTTTTATTATCACATTTTTATACATGCTATTT  650

seq1  AAAGTATTATAGTCACACTCACCTTATTGCTTTTTGCTACTGATTCCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATTATAGTCACACTCACCTTATTGCTTTTTGCTACTGATTCCCCT  700

seq1  ACTCAAAAAGTCTTAAATAGAAATGGATTGTTATCAAAGGATCAGAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAAAGTCTTAAATAGAAATGGATTGTTATCAAAGGATCAGAAAAA  750

seq1  TAAGTATTGTTCATATGACCGGTTGAGAAAACTAGTACATCCCTACATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATTGTTCATATGACCGGTTGAGAAAACTAGTACATCCCTACATAA  800

seq1  ATCTGAGAAGGATGCTTTCTCTTTCCTTAAGACAAAAATTCTGGAGTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGAAGGATGCTTTCTCTTTCCTTAAGACAAAAATTCTGGAGTTTC  850

seq1  TCTCAAAAGCCACATGAAAGCAACAGTAGTCAAAGAAAAGCAGAAATAAT  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTCAAAAGCCACATGAAAGCAACAGTAGTCAAAGAAAAGCAGAAA-AAT  899

seq1  CCAGACAGGAAAGAAATTAGAATGCTTACTCTTTATACATTGAAACC-TA  949
      ||||||||||||||||||||||||||||||| ||||||||||||||| ||
seq2  CCAGACAGGAAAGAAATTAGAATGCTTACTC-TTATACATTGAAACCTTA  948

seq1  CAAAGTTATAGTCATGGATGTGATACAGTACTACCAGACAAAGATCAATG  999
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAAAGTTATAGTCATGGATGTGATACAGTACTACCAGACAAAGATC-ATG  997

seq1  GACTATCATTTGCAATCTAGAATTAAA-TTCATGTGAACATGAAATATTT  1048
      |||||||| |||||||||||||||||| |||||||||||||||||  |||
seq2  GACTATCA-TTGCAATCTAGAATTAAATTTCATGTGAACATGAAAATTTT  1046

seq1  ATCCCCAAGAGGAG-AGTTTCCAGAATTTAACGTGAGAAATTTTGCTAGT  1097
      |||||| ||||||| || |||  ||||| | |||||||||||||||||||
seq2  ATCCCC-AGAGGAGAAGGTTCTCGAATTAATCGTGAGAAATTTTGCTAGT  1095

seq1  TACT-CATATCCATGTGGTTGTAGCTGAAGCTTT  1130
      |||| ||||||| ||  |||||||| | ||||||
seq2  TACTCCATATCC-TGGTGTTGTAGCCG-AGCTTT  1127


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