BAC Information

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BAC

Clone NameB6Ng01-006I05
Chromosome4 (Build37)
Map Location 92,122,311 - 92,123,428
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
Downstream geneLOC620269, LOC384125, Tusc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006I05.b
ACCDH843351
length1,122
definitionDH843351|Mus musculus domesticus DNA, BAC clone: B6Ng01-006I05, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaaacgagggggcatttctaggaaaaaaacaaaaacaaacaa
acaaacaaaaacaaaaaacaaaaatcttgagattctcctccctactaaaa
gaacctcagttgctttgggttttctgacttgttttctgaattcctttcct
ccatctgagctggaatatcaaactaaattcctcaggtagatcctttttgt
gttgtgttgcctctttcttttgtaaataaaaattgcatttaatgactata
gcaacatctgcaaatgtgagccccatatgaatgacccagagagggacatg
ttctgtacacaaagtccttgggatctgctgctggaaattaatgcttccca
ttgaagactctcttatcaaaactgtgtaagattctaggtaataataacat
gcttttataatgatttaaacttgcacaatcaagcacttgtctaagtttgg
gccatatttaaaagaaactctcccagaacataatagtccatatttgtatc
tgggacctcacagtacagtatcaggaaattttatcttatatttaaaatga
ctaatgtgtattttgtaattaggtatatatcatttataatttttcatctt
tcttgaacatcttcctattaccacaactatctcatgaatataaaacctga
gataaatatattacattttctaattaaaatattttatactgacactattt
taaaattccattttgctgaagagtatgcaatgattgcactttataaaatt
atttccttcagaacatttcacaggtctttacctttttatgtaattgaata
gcaattctggtactatactcataagacccataaaaatgcatatatgtaaa
actcttacaagtaatacagatatatgaacatatgatcatgaatttgtaga
attcaattgatgtaatcattgaagtgcttattacattatataatgaccct
gtattatattatgtccaaaaaaaccttaaatattcattttggtggccaga
atgcagcaaataatccttccaaaaataaaggaattattaagagtatttat
ttccgaaaatatctaaaataacatgacatgaatatatatgaatatatagg
gaactttccggatagcctttga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_92122311_92123428
seq2: B6Ng01-006I05.b_43_1164 (reverse)

seq1  TCAAATGCTATCCGGAAAGTTCCCTATATATCTAT-TATATTCATTGTCA  49
      ||||| |||||||||||||||||||||||||  || |||||||| |||||
seq2  TCAAAGGCTATCCGGAAAGTTCCCTATATATTCATATATATTCA-TGTCA  49

seq1  TGTTTATCTTAGATATTTCTGGAAAT-AATACATCTCATAATTTCTTTAT  98
      || |||| ||||||||||  |||||| |||||   | |||||| ||||||
seq2  TG-TTATTTTAGATATTTTCGGAAATAAATACTCTTAATAATTCCTTTAT  98

seq1  ATTTTGAATGTATATTTGCTGCATTCTGGGCACC-AAATGAATATTTTAA  147
       ||| ||| |  ||||||||||||||||| |||| |||||||||||| | 
seq2  TTTTGGAAGGATTATTTGCTGCATTCTGGCCACCAAAATGAATATTTAAG  148

seq1  GATTTTTTTGACATAATAT-ATACAGTGTCATTATATAATGTAATAAGCA  196
      | |||||| |||||||||| |||||| |||||||||||||||||||||||
seq2  GTTTTTTTGGACATAATATAATACAGGGTCATTATATAATGTAATAAGCA  198

seq1  CTTCAATGATTACATCAATTGAATTCTACAAATTCATGATCATATGTTCA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATGATTACATCAATTGAATTCTACAAATTCATGATCATATGTTCA  248

seq1  TATATCTGTATTACTTGTAAGAGTTTTACATATATGCATTTTTATGGGTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTGTATTACTTGTAAGAGTTTTACATATATGCATTTTTATGGGTC  298

seq1  TTATGAGTATAGTACCAGAATTGCTATTCAATTACATAAAAAGGTAAAGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGTATAGTACCAGAATTGCTATTCAATTACATAAAAAGGTAAAGA  348

seq1  CCTGTGAAATGTTCTGAAGGAAATAATTTTATAAAGTGCAATCATTGCAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAAATGTTCTGAAGGAAATAATTTTATAAAGTGCAATCATTGCAT  398

seq1  ACTCTTCAGCAAAATGGAATTTTAAAATAGTGTCAGTATAAAATATTTTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCAGCAAAATGGAATTTTAAAATAGTGTCAGTATAAAATATTTTA  448

seq1  ATTAGAAAATGTAATATATTTATCTCAGGTTTTATATTCATGAGATAGTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAAATGTAATATATTTATCTCAGGTTTTATATTCATGAGATAGTT  498

seq1  GTGGTAATAGGAAGATGTTCAAGAAAGATGAAAAATTATAAATGATATAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAATAGGAAGATGTTCAAGAAAGATGAAAAATTATAAATGATATAT  548

seq1  ACCTAATTACAAAATACACATTAGTCATTTTAAATATAAGATAAAATTTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATTACAAAATACACATTAGTCATTTTAAATATAAGATAAAATTTC  598

seq1  CTGATACTGTACTGTGAGGTCCCAGATACAAATATGGACTATTATGTTCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATACTGTACTGTGAGGTCCCAGATACAAATATGGACTATTATGTTCT  648

seq1  GGGAGAGTTTCTTTTAAATATGGCCCAAACTTAGACAAGTGCTTGATTGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGTTTCTTTTAAATATGGCCCAAACTTAGACAAGTGCTTGATTGT  698

seq1  GCAAGTTTAAATCATTATAAAAGCATGTTATTATTACCTAGAATCTTACA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTTAAATCATTATAAAAGCATGTTATTATTACCTAGAATCTTACA  748

seq1  CAGTTTTGATAAGAGAGTCTTCAATGGGAAGCATTAATTTCCAGCAGCAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTGATAAGAGAGTCTTCAATGGGAAGCATTAATTTCCAGCAGCAG  798

seq1  ATCCCAAGGACTTTGTGTACAGAACATGTCCCTCTCTGGGTCATTCATAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAGGACTTTGTGTACAGAACATGTCCCTCTCTGGGTCATTCATAT  848

seq1  GGGGCTCACATTTGCAGATGTTGCTATAGTCATTAAATGCAATTTTTATT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTCACATTTGCAGATGTTGCTATAGTCATTAAATGCAATTTTTATT  898

seq1  TACAAAAGAAAGAGGCAACACAACACAAAAAGGATCTACCTGAGGAATTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAGAAAGAGGCAACACAACACAAAAAGGATCTACCTGAGGAATTT  948

seq1  AGTTTGATATTCCAGCTCAGATGGAGGAAAGGAATTCAGAAAACAAGTCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGATATTCCAGCTCAGATGGAGGAAAGGAATTCAGAAAACAAGTCA  998

seq1  GAAAACCCAAAGCAACTGAGGTTCTTTTAGTAGGGAGGAGAATCTCAAGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCCAAAGCAACTGAGGTTCTTTTAGTAGGGAGGAGAATCTCAAGA  1048

seq1  TTTTTGTTTTTTGTTTTTGTTTGTTTGTTTGTTTTTGTTTTTTT-CTAGA  1095
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTTTTGTTTTTTGTTTTTGTTTGTTTGTTTGTTTTTGTTTTTTTCCTAGA  1098

seq1  AATGTTCTCTC-TTTGTGGAATTC  1118
      ||||  | ||| ||||||||||||
seq2  AATGCCCCCTCGTTTGTGGAATTC  1122