BAC Information

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BAC

Clone NameB6Ng01-007H17
Chromosome4 (Build37)
Map Location 20,988,096 - 20,988,974
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667301, EG664800, E130310K16Rik
Downstream genePrdm13, Ccnc, 2610029I01Rik, Usp45, 4930528A17Rik, 5730406M06Rik, Coq3, 6230409E13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007H17.bB6Ng01-007H17.g
ACCDH844039DH844040
length743879
definitionDH844039|Mus musculus domesticus DNA, BAC clone: B6Ng01-007H17, 5' end.DH844040|Mus musculus domesticus DNA, BAC clone: B6Ng01-007H17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaaactggaatgaatgggaagcacctagagaaatg
tgcaacatcctaagtcatcaaggaaatgcaaatcaaaacaaccctgagat
tccacctcacactagtcagaatggctaagatcaacaactcaagtgacatc
agatgtttgtgaggatgtggagaaagaggaacactcctccattgttggta
ggattgcaacctggcacaaccactctggaaatcagtttggcggttcctta
gaaagctataccactcctggacatatatccagaagatgctccaacatgta
ataaggaaacatgctccacaatgttcatagcagccttatttataatagcc
agaagctgcaaaaaacaaaacaaaacaaaacagatgtccctcaacagagg
aatggatacagaaaatgtggtacatttaaattatggagtcctactcagct
ctgttaaaaacaataactacatgaaattcacaggcaaatagatatatcta
gaaaatatcatcccaagtgaggtaactcagacacaaagaccaaacttggt
ataaactcactgatacatgggtattaaccaaagatcatggagtatccaca
ataaaactcagggaccacatgaagttcaagaggaaggaagaccagagtgt
atgattcagtcctacttagaagggggaacaaaataatcaagcgatttaga
gggttggagggacttgggaggaagagaagagggggaggagaaa

gaattcttgagggaggaaattgaacataaggtcattctagaacagcagcg
tggagtagaaatagaacgccagcaaatatcattaagattaccgattctct
tgctgtgaagttaattagtaaacttaatgcacataatctcatggctggga
gacttaattagaaggaaaattagaaagataaagaatttaggtggtatttt
caatggctcataagataaaataagatttaacatcatgtctgtcacttttt
cttcttcctaacaaaatagcaattcatggctttggctatttttatgtaac
aaaataaaacttcacttgcaattaaatgataataaatgaagttttagctg
actcaccatagaggatcagagaaccttaaaatatacttataaaacacaac
tctgatatcacaaaggaagtaaactcattgctacaatgctacattagttt
gccttagtatcatccatttaaaaaaataagaatattataaaataacaaaa
ataattactctgcacagagaaagtttattgctggttttatgagaagttgt
ctgttaaacgtgatgaagcaatatgttcttgaatgtgaatgggcatatag
aaggcttacatttgattttataatgtaactaggcatcacagaatgccttc
aaagttcctgttggttaagaacaagagttctataccttttgcacaatatg
tctctgtatgaaaattaagaatgaaaaagaaggcagaactgattagaaaa
atatggaaaaaaactgcctgcagtacaagagccacattttgggctaggga
tagtatatgaatatagcaaaatatcattatgagaaattttaatgactctg
tgtgtgtgtgtgtgtgtgagagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_20988096_20988974
seq2: B6Ng01-007H17.g_65_943 (reverse)

seq1  TCTCTCTCTCTCACACACACACACACACACAGAGTCATTAAAATTTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCACACACACACACACACACAGAGTCATTAAAATTTCTCA  50

seq1  TAATGATATTTTGCTATATTCATATACTATCCCTAGCCCAAAATGTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATATTTTGCTATATTCATATACTATCCCTAGCCCAAAATGTGGCT  100

seq1  CTTGTACTGCAGGCAGTTTTTTTCCATATTTTTCTAATCAGTTCTGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTACTGCAGGCAGTTTTTTTCCATATTTTTCTAATCAGTTCTGCCTT  150

seq1  CTTTTTCATTCTTAATTTTCATACAGAGACATATTGTGCAAAAGGTATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCATTCTTAATTTTCATACAGAGACATATTGTGCAAAAGGTATAG  200

seq1  AACTCTTGTTCTTAACCAACAGGAACTTTGAAGGCATTCTGTGATGCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTGTTCTTAACCAACAGGAACTTTGAAGGCATTCTGTGATGCCTA  250

seq1  GTTACATTATAAAATCAAATGTAAGCCTTCTATATGCCCATTCACATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATTATAAAATCAAATGTAAGCCTTCTATATGCCCATTCACATTCA  300

seq1  AGAACATATTGCTTCATCACGTTTAACAGACAACTTCTCATAAAACCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATATTGCTTCATCACGTTTAACAGACAACTTCTCATAAAACCAGC  350

seq1  AATAAACTTTCTCTGTGCAGAGTAATTATTTTTGTTATTTTATAATATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACTTTCTCTGTGCAGAGTAATTATTTTTGTTATTTTATAATATTC  400

seq1  TTATTTTTTTAAATGGATGATACTAAGGCAAACTAATGTAGCATTGTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTTAAATGGATGATACTAAGGCAAACTAATGTAGCATTGTAGC  450

seq1  AATGAGTTTACTTCCTTTGTGATATCAGAGTTGTGTTTTATAAGTATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTTTACTTCCTTTGTGATATCAGAGTTGTGTTTTATAAGTATATT  500

seq1  TTAAGGTTCTCTGATCCTCTATGGTGAGTCAGCTAAAACTTCATTTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTTCTCTGATCCTCTATGGTGAGTCAGCTAAAACTTCATTTATTA  550

seq1  TCATTTAATTGCAAGTGAAGTTTTATTTTGTTACATAAAAATAGCCAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAATTGCAAGTGAAGTTTTATTTTGTTACATAAAAATAGCCAAAG  600

seq1  CCATGAATTGCTATTTTGTTAGGAAGAAGAAAAAGTGACAGACATGATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAATTGCTATTTTGTTAGGAAGAAGAAAAAGTGACAGACATGATGT  650

seq1  TAAATCTTATTTTATCTTATGAGCCATTGAAAATACCACCTAAATTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTTATTTTATCTTATGAGCCATTGAAAATACCACCTAAATTCTTT  700

seq1  ATCTTTCTAATTTTCCTTCTAATTAAGTCTCCCAGCCATGAGATTATGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTAATTTTCCTTCTAATTAAGTCTCCCAGCCATGAGATTATGTG  750

seq1  CATTAAGTTTACTAATTAACTTCACAGCAAGAGAATCGGTAATCTTAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGTTTACTAATTAACTTCACAGCAAGAGAATCGGTAATCTTAATG  800

seq1  ATATTTGCTGGCGTTCTATTTCTACTCCACGCTGCTGTTCTAGAATGACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGCTGGCGTTCTATTTCTACTCCACGCTGCTGTTCTAGAATGACC  850

seq1  TTATGTTCAATTTCCTCCCTCAAGAATTC  879
      |||||||||||||||||||||||||||||
seq2  TTATGTTCAATTTCCTCCCTCAAGAATTC  879


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