BAC Information

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BAC

Clone NameB6Ng01-011C07
Chromosome4 (Build37)
Map Location 57,916,439 - 57,917,542
singlet/doubletsinglet
Overlap genenone
Upstream geneD730040F13Rik, 6430704M03Rik, Epb4.1l4b, Ptpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513, Akap2
Downstream geneD630039A03Rik, Txn1, Txndc8, Svep1, Musk, Edg2, LOC675306, LOC433711, Olfr267, AI314180
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011C07.bB6Ng01-011C07.g
ACCDH846608DH846609
length1,1641,110
definitionDH846608|Mus musculus domesticus DNA, BAC clone: B6Ng01-011C07, 5' end.DH846609|Mus musculus domesticus DNA, BAC clone: B6Ng01-011C07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagattggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggcttcca
atggaggagctagaagaagtactcaaagaagctaaagggatcttcaactc
tataggtggacacattatgaactaccagtaccctgagctccttgactcta
gctgcatatgtatcaaagattgcctagcgcatactggcagagggcccatt
gaatacctcactttggtggcctggttacagggaacgccagggcaaagaga
gtgaagatgggtgg
gaattcagggggaggatttaaatgtagccaggtgagggagtcaccaggat
acagataaaggagagatgaaaggatgaatggtacctggtagatgaatcat
ctttgtggatggaagctctcactgagcagaggcacagccagagtaatgtc
atgggcgtttatctctgcccacggctctctccatctctcaccctaatgct
gggtagggtgaggtacaccactgaaagggagtttccctcttttcctcaaa
aatagtccctatattcaccaccgcaaataaaagtctcaaaacaaaacaaa
acaaaacaaaacaaaacaaaaacaaacaaccctacattctaaaaattgcc
aattttggctacattaccaagaatagtagctctcggtgtggtgtcctctc
cccaccccacccccctgccgcctaaatttcagcatggctgtgctgattga
tggcagaggcctgcgatctgttaacaagccttccaggtgggcccagggca
tgcaaaacgctagcgcttacttggggtttcatctgaagtacagacatgtg
ccaaatcagccagtttgaaaggagttttacattcaagtcttaagagttgg
gtgccagatggagtggctcatgtctttaatttcagcactcgacaggcaga
gatggggaaatttttgtgtgttttagaccagcctggtctatatagtgagc
tccaggacaatcagtgctaggtaaggagaccctgtctcaaaaccaaacca
aaccaaaagagaatacacaaccgtgctatcagagtttcgaagttgggcac
tctgactgagacagtgtggggagcctgccccctagtggagaaggataggt
tggctccgctgcacaggttggtttagatatttattcttagtttaggggaa
actcatttctaccactgttccagaagtttttatcacctccaattacagtt
tgagaaactcggttcagtaaagggtcaccgaggttccagcagcaaagaga
tagaacccaactccctagctctgagccccaggaagggtactggcttgtgg
catataggaagtcctggaaatgggcaggcaagggatcccggaggagaggt
tgtccatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_57916439_57917542
seq2: B6Ng01-011C07.g_69_1178

seq1  GAATTCAGGGGGAGGATTTAAATGTAGCCAGGTGAGGGAGTCACCAGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGGGAGGATTTAAATGTAGCCAGGTGAGGGAGTCACCAGGAT  50

seq1  ACAGATAAAGGAGAGATGAAAGGATGAATGGTACCTGGTAGATGAATCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATAAAGGAGAGATGAAAGGATGAATGGTACCTGGTAGATGAATCAT  100

seq1  CTTTGTGGATGGAAGCTCTCACTGAGCAGAGGCACAGCCAGAGTAATGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGGATGGAAGCTCTCACTGAGCAGAGGCACAGCCAGAGTAATGTC  150

seq1  ATGGGCGTTTATCTCTGCCCACGGCTCTCTCCATCTCTCACCCTAATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCGTTTATCTCTGCCCACGGCTCTCTCCATCTCTCACCCTAATGCT  200

seq1  GGGTAGGGTGAGGTACACCACTGAAAGGGAGTTTCCCTCTTTTCCTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGGGTGAGGTACACCACTGAAAGGGAGTTTCCCTCTTTTCCTCAAA  250

seq1  AATAGTCCCTATATTCACCACCGCAAATAAAAGTCTCAAAACAAAACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTCCCTATATTCACCACCGCAAATAAAAGTCTCAAAACAAAACAAA  300

seq1  ACAAAACAAAACAAAACAAAAACAAACAACCCTACATTCTAAAAATTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAAAACAAAAACAAACAACCCTACATTCTAAAAATTGCC  350

seq1  AATTTTGGCTACATTACCAAGAATAGTAGCTCTCGGTGTGGTGTCCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGGCTACATTACCAAGAATAGTAGCTCTCGGTGTGGTGTCCTCTC  400

seq1  CCCACCCCACCCCCCTGCCGCCTAAATTTCAGCATGGCTGTGCTGATTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCACCCCCCTGCCGCCTAAATTTCAGCATGGCTGTGCTGATTGA  450

seq1  TGGCAGAGGCCTGCGATCTGTTAACAAGCCTTCCAGGTGGGCCCAGGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGAGGCCTGCGATCTGTTAACAAGCCTTCCAGGTGGGCCCAGGGCA  500

seq1  TGCAAAACGCTAGCGCTTACTTGGGGTTTCATCTGAAGTACAGACATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAACGCTAGCGCTTACTTGGGGTTTCATCTGAAGTACAGACATGTG  550

seq1  CCAAATCAGCCAGTTTGAAAGGAGTTTTACATTCAAGTCTTAAGAGTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCAGCCAGTTTGAAAGGAGTTTTACATTCAAGTCTTAAGAGTTGG  600

seq1  GTGCCAGATGGAGTGGCTCATGTCTTTAATTTCAGCACTCGACAGGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAGATGGAGTGGCTCATGTCTTTAATTTCAGCACTCGACAGGCAGA  650

seq1  GATGGGGAAATTTTTGTGTGTTTTAGACCAGCCTGGTCTATATAGTGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGGAAATTTTTGTGTGTTTTAGACCAGCCTGGTCTATATAGTGAGC  700

seq1  TCCAGGACAATCAGTGCTAGGTAAGGAGACCCTGTCTCAAAACCAAACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGACAATCAGTGCTAGGTAAGGAGACCCTGTCTCAAAACCAAACCA  750

seq1  AACCAAAAGAGAATACACAACCGTGCTATCAGAG-TTCGAAGTTGGGCAC  799
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AACCAAAAGAGAATACACAACCGTGCTATCAGAGTTTCGAAGTTGGGCAC  800

seq1  TCTGACTGAGACAGTGTGGGGAGCCTGCCCCCTAGTGGAGAAGGATAGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTGAGACAGTGTGGGGAGCCTGCCCCCTAGTGGAGAAGGATAGGT  850

seq1  TGGCTCCGCTGCACAGGTTGGTTTAGATATTTATTCTTAGTTTAGGGGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCCGCTGCACAGGTTGGTTTAGATATTTATTCTTAGTTTAGGGGAA  900

seq1  ACTCATTTCTACCACTGTTCCAGAAG-TTTTATCACCTCCAATTACAG-T  947
      |||||||||||||||||||||||||| ||||||||||||||||||||| |
seq2  ACTCATTTCTACCACTGTTCCAGAAGTTTTTATCACCTCCAATTACAGTT  950

seq1  TGAGAAACTCGGTTCAGT-AAGGGTCACCGAGGTTCCAGCAGCAGAGAGA  996
      |||||||||||||||||| ||||||||||||||||||||||||| |||||
seq2  TGAGAAACTCGGTTCAGTAAAGGGTCACCGAGGTTCCAGCAGCAAAGAGA  1000

seq1  TTAGAACCCCAACTCCCT-GCTCTGAGCCCCAGGAAGGGTACT-GCCTGT  1044
       ||||| ||||||||||| |||||||||||||||||||||||| || |||
seq2  -TAGAA-CCCAACTCCCTAGCTCTGAGCCCCAGGAAGGGTACTGGCTTGT  1048

seq1  GGCATA-AGGAAGTCGTGG-AATTGGCAGGCAAGGATCCCCTGAGTGAAG  1092
      |||||| |||||||| ||| ||| |||||||||||   ||| |||   ||
seq2  GGCATATAGGAAGTCCTGGAAATGGGCAGGCAAGGGATCCCGGAGGAGAG  1098

seq1  GTTGTCCATCTC  1104
      ||||||||||||
seq2  GTTGTCCATCTC  1110