BAC Information

Click to search

BAC

Clone NameB6Ng01-011O02
Chromosome4 (Build37)
Map Location 146,940,920 - 146,941,995
singlet/doubletsinglet
Overlap geneOTTMUSG00000010673
Upstream geneLOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718
Downstream gene2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011O02.bB6Ng01-011O02.g
ACCDH847139DH847140
length1,2011,078
definitionDH847139|Mus musculus domesticus DNA, BAC clone: B6Ng01-011O02, 5' end.DH847140|Mus musculus domesticus DNA, BAC clone: B6Ng01-011O02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattaatccacctacttatttctttctataccagtaccatacaa
atttttattactatttttctgccatacatctttaagttacagaaattgat
agctccagattttttttgttgttcaagaatattttatctatcctgtggtt
tttgttttgtttgctgttctgtacaacgttgagaatatttctttcaagat
ctgtgaagatttgtgctaaatttttgataagaattgtactgagtgtctag
attgctttttggtaagatggacatattcattatgttaatcctattgatac
atgaacaagggagatctttgtcatgttctgatatcttcctgtttctttct
taagatactttaagttcttctcctacaggttttcacttgcttgtttagag
gtaactgaaggtattttattttgtttgtggctaaagtggagggttctgtt
tccataacttctttttcaacccttttaatcaattgtgtgtagcagggcta
aggttttctttaagacaattgtgtatgcagacactttgctaaaatgttta
tcaactgtaattttttggtagaattttttgtctcacttatacacattatc
ataatatctgaattttttcttttccaaattgtattcccttgatctcttaa
gctgctttattgcttgagctaatacttccagtactatatcaaagagatga
ggggatagtggacagcctttccttgttcctgattttaatggaaatgctta
aaatttctctctatttagtttgattttgggtgatagattgctgaacattg
cctatattttgtttgggtatactcccttgcattctgtccctccaaacgta
tcctaaaggggggttgaattttccaaatacctttttggcatctggtaaaa
tatttatgtgggcttatctttcactttttttttttcttacggtgcattat
tgtgattgcttatcctggttgtcaacttgactaaacctggaatgcactac
catccataaatacaggaaaatacctgttgatcaagatctgcggcttaaaa
tacaggcttctgcctacatttgtgacataggattgagaacactctttatc
cagatctttaagccataaagccatgagatggttaagcctagtttaggttg
taatgcctttaattcaggaaacaagggaacgcgaactctgagaattcata
g
gaattctctgtttaggtatctaccccattttttgattggtttgtttggtt
tcttggcggttcgcttcttgtgtcttttatatatattcgatattagccct
ctatcaagtgtggggatagagaagattttttttcccaatctgtaggttgc
cactttgtcctatttactatgtcctttgccttacaaaattttctagtttc
atgaggtcccatttgtcaattcctgaccttagaacttgagccattggagt
ttttttttaggaaatttccccctgtgacagtaagtttgaggctctttccc
actttatcttctatttcctggattgtgtcttgttttatgttgaggtcctt
gatctacttgaacttgagctttgtgcaaggtgataaatgtggatctattt
tcattttcctacatgcagactgccagttagaccagcactggttattgaag
atgttttcttttttctatttttgagtgactcattttcatgcttgtaagcc
ctcgcatacataattatgtgaaaatgtctttcacaaccagtgtcccactg
ccaaatttttcaaaatatctttctcacctcacttatgtgcaagtgtcttt
cctgactgtgctggcacttaccctggcactctaagaaggtagccttcatg
ctccatgaatcctgtcccaatatttatttatttatttatttttatttatt
atttattatatgtaagtacactgtagctgtcttcagacacaccagaagag
ggcatcagatctcattacggatggttgtgagccaccatgtggttgctggg
atttgaacttccggacctttggaagagcagtcgggtgctcttacccactg
agccatctcaccagcctcccaattttttattggatttatgtctccacagc
agctaattgagaatcaaagatgtggctcttcagtaaaggcacgtcttctt
gcactatgcaggttcaagttcctgtaactgcctgggactttcttcctttc
agaatatcttttaccattgtctggtgctatagcttcttggatttctgaag
tcctacagggctacatgcaatccaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146940920_146941995
seq2: B6Ng01-011O02.g_64_1141

seq1  GAATTCTCTGTTTAGGTATCTACCCCATTTTTTGATTGGTTTGTTTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTAGGTATCTACCCCATTTTTTGATTGGTTTGTTTGGTT  50

seq1  TCTTGGCGGTTCGCTTCTTGTGTCTTTTATATATATTCGATATTAGCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCGGTTCGCTTCTTGTGTCTTTTATATATATTCGATATTAGCCCT  100

seq1  CTATCAAGTGTGGGGATAGAGAAGATTTTTTTTCCCAATCTGTAGGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAAGTGTGGGGATAGAGAAGATTTTTTTTCCCAATCTGTAGGTTGC  150

seq1  CACTTTGTCCTATTTACTATGTCCTTTGCCTTACAAAATTTTCTAGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGTCCTATTTACTATGTCCTTTGCCTTACAAAATTTTCTAGTTTC  200

seq1  ATGAGGTCCCATTTGTCAATTCCTGACCTTAGAACTTGAGCCATTGGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTCCCATTTGTCAATTCCTGACCTTAGAACTTGAGCCATTGGAGT  250

seq1  TTTTTTTTAGGAAATTTCCCCCTGTGACAGTAAGTTTGAGGCTCTTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAGGAAATTTCCCCCTGTGACAGTAAGTTTGAGGCTCTTTCCC  300

seq1  ACTTTATCTTCTATTTCCTGGATTGTGTCTTGTTTTATGTTGAGGTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATCTTCTATTTCCTGGATTGTGTCTTGTTTTATGTTGAGGTCCTT  350

seq1  GATCTACTTGAACTTGAGCTTTGTGCAAGGTGATAAATGTGGATCTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTACTTGAACTTGAGCTTTGTGCAAGGTGATAAATGTGGATCTATTT  400

seq1  TCATTTTCCTACATGCAGACTGCCAGTTAGACCAGCACTGGTTATTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCCTACATGCAGACTGCCAGTTAGACCAGCACTGGTTATTGAAG  450

seq1  ATGTTTTCTTTTTTCTATTTTTGAGTGACTCATTTTCATGCTTGTAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCTTTTTTCTATTTTTGAGTGACTCATTTTCATGCTTGTAAGCC  500

seq1  CTCGCATACATAATTATGTGAAAATGTCTTTCACAACCAGTGTCCCACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCATACATAATTATGTGAAAATGTCTTTCACAACCAGTGTCCCACTG  550

seq1  CCAAATTTTTCAAAATATCTTTCTCACCTCACTTATGTGCAAGTGTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTTTTCAAAATATCTTTCTCACCTCACTTATGTGCAAGTGTCTTT  600

seq1  CCTGACTGTGCTGGCACTTACCCTGGCACTCTAAGAAGGTAGCCTTCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTGTGCTGGCACTTACCCTGGCACTCTAAGAAGGTAGCCTTCATG  650

seq1  CTCCATGAATCCTGTCCCAATATTTATTTATTTATTTATTTTTATTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGAATCCTGTCCCAATATTTATTTATTTATTTATTTTTATTTATT  700

seq1  ATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAG  750

seq1  GGCATCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGG  800

seq1  ATTTGAAC-TCCGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACTG  849
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAACTTCCGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACTG  850

seq1  AGCCATCTCACCAGCCCCCCAA-TATTTATT-GATTTATGTCTCCACAGC  897
      |||||||||||||||| ||||| | |||||| ||||||||||||||||||
seq2  AGCCATCTCACCAGCCTCCCAATTTTTTATTGGATTTATGTCTCCACAGC  900

seq1  AGCTAATTGAGAATCAAAGATGTGGCTCTCCAGTTAAGGGCACGTCTTCT  947
      ||||||||||||||||||||||||||||| ||| ||| ||||||||||||
seq2  AGCTAATTGAGAATCAAAGATGTGGCTCTTCAG-TAAAGGCACGTCTTCT  949

seq1  TGCACTATGCAGGTTCAGGTTCCTGTAACTGCCTGGGGACTTTTCTTCCT  997
      ||||||||||||||||| |||||||||||||||| ||||| |||||||||
seq2  TGCACTATGCAGGTTCAAGTTCCTGTAACTGCCT-GGGAC-TTTCTTCCT  997

seq1  TCCAGAATATCTTTTACCATTGTCTGGGTGCTATAGCTTC-TGGATTTCT  1046
      | ||||||||||||||||||||||| |||||||||||||| |||||||||
seq2  TTCAGAATATCTTTTACCATTGTCT-GGTGCTATAGCTTCTTGGATTTCT  1046

seq1  GAAGT-CTACAGAGCTACATGCAGT-CAAAGA  1076
      ||||| |||||| |||||||||| | ||||||
seq2  GAAGTCCTACAGGGCTACATGCAATCCAAAGA  1078