BAC Information

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BAC

Clone NameB6Ng01-012P12
Chromosome4 (Build37)
Map Location 146,766,444 - 146,902,343
singlet/doubletdoublet
Overlap geneLOC627701, OTTMUSG00000010671, LOC545718
Upstream geneRex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588
Downstream geneOTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012P12.bB6Ng01-012P12.g
ACCDH847909DH847910
length1,2121,124
definitionDH847909|Mus musculus domesticus DNA, BAC clone: B6Ng01-012P12, 5' end.DH847910|Mus musculus domesticus DNA, BAC clone: B6Ng01-012P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,901,102 - 146,902,343)(146,766,444 - 146,767,577)
sequence
gaattctccaaatattccagatcaaaaaaatctaggggagccgcgggtta
ccgtgcagacatgaccaagtccaagaaccacaccacacacaaccagtccc
gcaaatggcacagaaatggcatcaagaaaccccggtcgcaaagatacgaa
cctcttaagggggttgaccccaagttcctgagaaacatgcgctttgccaa
gaagcacaacaagaaaggcctgaagaagatgcaggccaacaatgcaaagg
cagtaaatatgcccgcagaggccatcaagcccaagatgccaaaaggcccc
aaattcaagcggctggctttcattgctcaccctaagcttgggaagcagat
tcaaagctacatggccaagggtcagaggctctgccaactgaagcctaagg
ttcaaaccaaggcaggggccaaagctccaactaaggcccaggcttcagac
ccagcccaggctcccaaaggtgctcaggcccccaaaggtgcccaggcccc
tatgaaggccccatagaaaaggctcctgcaagtgtgaagacagacggact
gctgtgacacacctccccacacactatttgcagatgaccactgtcctatt
ctgttcttagaaataaactcaggcaagatctgttaaaaaaaatctagaag
ctgggcgtggtggtgcacgtctttaatcccagcaattgggaggtagaggc
aggtgaatttatgagttcgagaccagcctggtctacaaagtgagttccag
gacagccagggctacacagagaaaccttgtctcgaaaaatttttttaaaa
aaatctagaaacatgaattttcctgttataatacactacaattaaaacaa
atatcatattgtatgtttcttaacatgctaagggatgaatagaatggtca
tctcatcattgacatgcacagtttgttaaacttgtaatttcgctaatatt
tattcttatatagaaagtcatttgtggacattaggaaaatcttgaaaata
taaaacttgatatagaaaataatgaattagttccatgcagaatcatgtag
aagtagaatgtgaataataatttgacatcttttatcatgcttttcatgtt
tttttcagcaagtttatctgtcctcgaacgatggtctaatgcctggttct
gtgccacctgcaatcgaagcatcagtccaaactgaacataagatgtttgt
cagcacaccctg
gaattcttccaaaagggaaacttttcaaatacattgatggtttgaatcct
ttattttggcctatctcttagaatgtaacagataatttatacaggcaaga
atcttaacaaatataatatatgctgaaatatctttgacttcatttcagtg
cagaaaaaatatgtaaaatatttttttatgggaaaaaaagttctcctggg
gaaatgtggcatatgttttacacgggtaatattcttttcaacagttagtg
ctctaaactagagaattatgaatctgaaaacttttgaaaaccttcatgca
atgttcaaatcttagataatgtcaactattatgctggcagtaactctgaa
tatatgataatgaagaaacattttcattaaacttttacttgttcaccctc
aaatattatatgatgaagtcaggtgtgaaagccagaagaatatgatgttg
tgcaacaattcatggagatagaaatgatccattccaaaaggaaactaaat
aaagagtgtactatcgccttcaaaatgtctaataaaactggcagcatttt
gtatatttaattcaaatgaagaaattgacacagattgtacttgatagtgt
atttgacaaactgagccaccaagactgcatgttcttaatcctataatatg
cctacagatgtgaagtgtgctttgagtatccagtattcattattcttatc
acgtcaatgtgacaaatgatttattggtttcacgtttcaggatagtgact
gactatgagtcccttatgctctgtcaacatctccttcctcattgccctgt
aaataaagctgaatattttaacaaggttgacttggctgttttcagtttgc
acttataattagatgaataaatgttgcatcatcgctggaactatttctca
taaagtatttgctgaagtcatgaatattttctgtaacctgtaacttaact
tatatttgtgattgtcagctggtcaatacaaccttgaccccatacgaata
tatgaattgtatatagtgtttagcattagaaaattagcaacagtgtatta
gagatgatgatttgtgttaactaaaacaggatgattctatgccaaatcca
ggcttactgctcaattagtactag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146901102_146902343
seq2: B6Ng01-012P12.b_44_1255 (reverse)

seq1  CAGGGTG-GCTGACAAACATCCTTAATGTCAGTTTTGGACATCTGATGCC  49
      ||||||| |||||||||||| ||||   |||| ||||||   ||||||| 
seq2  CAGGGTGTGCTGACAAACAT-CTTATGTTCAG-TTTGGA---CTGATGC-  44

seq1  TTTTTCTGACTGCAGTTGGCAACAGACACAGAGCATATAGACATACGTTC  99
         ||| || ||||| |||| |||||  ||| |||| |||||   |||||
seq2  ---TTC-GATTGCAGGTGGC-ACAGAACCAG-GCAT-TAGACCATCGTTC  87

seq1  TGAAGACAGATAAACCTTGGCTGGAAAAAAAAACATTGAAAAAGCATGGA  149
       || |||||||||||  | ||||   ||||||||||   |||||||| ||
seq2  -GAGGACAGATAAAC--TTGCTG---AAAAAAACAT--GAAAAGCAT-GA  128

seq1  TAAAAGATGGTTCAAATTTATTATTCACATTCTACCTCTACAATTGATTC  199
      |||||||||  ||||| |||||||||||||||||| ||||||  ||||||
seq2  TAAAAGATG--TCAAA-TTATTATTCACATTCTACTTCTACA--TGATTC  173

seq1  TGCATGGAACTAATTCATTATTTTTCTATATCAAGTTTTATTATTTTCAA  249
      |||||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  TGCATGGAACTAATTCATTA-TTTTCTATATCAAGTTTTA-TATTTTCAA  221

seq1  GATTTTCCTAATGTCCACAAAATTGACTTTCTATATAAGAATAAATATTA  299
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  GATTTTCCTAATGTCCACAAA--TGACTTTCTATATAAGAATAAATATTA  269

seq1  GCGAAATTACAAGTTTAACAAACTGTGCATGTCAATGATGAGATGACCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAATTACAAGTTTAACAAACTGTGCATGTCAATGATGAGATGACCAT  319

seq1  TCTATTCATCCCTTAGCATGTTAAGAAACATACAATATGATATTTGTTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCATCCCTTAGCATGTTAAGAAACATACAATATGATATTTGTTTT  369

seq1  AATTGTAGTGTATTATAACAGGAAAATTCATGTTTCTAGATTTTTTTAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAGTGTATTATAACAGGAAAATTCATGTTTCTAGATTTTTTTAAA  419

seq1  AAAATTTTTCGAGACAAGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTTCGAGACAAGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAAC  469

seq1  TCACTTTGTAGACCAGGCTGGTCTCGAACTCATAAATTCACCTGCCTCTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTGTAGACCAGGCTGGTCTCGAACTCATAAATTCACCTGCCTCTA  519

seq1  CCTCCCAATTGCTGGGATTAAAGACGTGCACCACCACGCCCAGCTTCTAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAATTGCTGGGATTAAAGACGTGCACCACCACGCCCAGCTTCTAG  569

seq1  ATTTTTTTTAACAGATCTTGCCTGAGTTTATTTCTAAGAACAGAATAGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTAACAGATCTTGCCTGAGTTTATTTCTAAGAACAGAATAGGA  619

seq1  CAGTGGTCATCTGCAAATAGTGTGTGGGGAGGTGTGTCACAGCAGTCCGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTCATCTGCAAATAGTGTGTGGGGAGGTGTGTCACAGCAGTCCGT  669

seq1  CTGTCTTCACACTTGCAGGAGCCTTTTCTATGGGGCCTTCATAGGGGCCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCACACTTGCAGGAGCCTTTTCTATGGGGCCTTCATAGGGGCCT  719

seq1  GGGCACCTTTGGGGGCCTGAGCACCTTTGGGAGCCTGGGCTGGGTCTGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACCTTTGGGGGCCTGAGCACCTTTGGGAGCCTGGGCTGGGTCTGAA  769

seq1  GCCTGGGCCTTAGTTGGAGCTTTGGCCCCTGCCTTGGTTTGAACCTTAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGCCTTAGTTGGAGCTTTGGCCCCTGCCTTGGTTTGAACCTTAGG  819

seq1  CTTCAGTTGGCAGAGCCTCTGACCCTTGGCCATGTAGCTTTGAATCTGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTTGGCAGAGCCTCTGACCCTTGGCCATGTAGCTTTGAATCTGCT  869

seq1  TCCCAAGCTTAGGGTGAGCAATGAAAGCCAGCCGCTTGAATTTGGGGCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGCTTAGGGTGAGCAATGAAAGCCAGCCGCTTGAATTTGGGGCCT  919

seq1  TTTGGCATCTTGGGCTTGATGGCCTCTGCGGGCATATTTACTGCCTTTGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCATCTTGGGCTTGATGGCCTCTGCGGGCATATTTACTGCCTTTGC  969

seq1  ATTGTTGGCCTGCATCTTCTTCAGGCCTTTCTTGTTGTGCTTCTTGGCAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGGCCTGCATCTTCTTCAGGCCTTTCTTGTTGTGCTTCTTGGCAA  1019

seq1  AGCGCATGTTTCTCAGGAACTTGGGGTCAACCCCCTTAAGAGGTTCGTAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCATGTTTCTCAGGAACTTGGGGTCAACCCCCTTAAGAGGTTCGTAT  1069

seq1  CTTTGCGACCGGGGTTTCTTGATGCCATTTCTGTGCCATTTGCGGGACTG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCGACCGGGGTTTCTTGATGCCATTTCTGTGCCATTTGCGGGACTG  1119

seq1  GTTGTGTGTGGTGTGGTTCTTGGACTTGGTCATGTCTGCACGGTAACCCG  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTGTGGTGTGGTTCTTGGACTTGGTCATGTCTGCACGGTAACCCG  1169

seq1  CGGCTCCCCTAGATTTTTTTGATCTGGAATATTTGGAGAATTC  1242
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTCCCCTAGATTTTTTTGATCTGGAATATTTGGAGAATTC  1212

seq1: chr4_146766444_146767577
seq2: B6Ng01-012P12.g_66_1189

seq1  GAATTCTTCCAAAAGGGAAACTTTTCAAATACATTGATGGTTTGAATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCAAAAGGGAAACTTTTCAAATACATTGATGGTTTGAATCCT  50

seq1  TTATTTTGGCCTATCTCTTAGAATGTAACAGATAATTTATACAGGCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGGCCTATCTCTTAGAATGTAACAGATAATTTATACAGGCAAGA  100

seq1  ATCTTAACAAATATAATATATGCTGAAATATCTTTGACTTCATTTCAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAACAAATATAATATATGCTGAAATATCTTTGACTTCATTTCAGTG  150

seq1  CAGAAAAAATATGTAAAATATTTTTTTATGGGAAAAAAAGTTCTCCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAATATGTAAAATATTTTTTTATGGGAAAAAAAGTTCTCCTGGG  200

seq1  GAAATGTGGCATATGTTTTACACGGGTAATATTCTTTTCAACAGTTAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTGGCATATGTTTTACACGGGTAATATTCTTTTCAACAGTTAGTG  250

seq1  CTCTAAACTAGAGAATTATGAATCTGAAAACTTTTGAAAACCTTCATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAACTAGAGAATTATGAATCTGAAAACTTTTGAAAACCTTCATGCA  300

seq1  ATGTTCAAATCTTAGATAATGTCAACTATTATGCTGGCAGTAACTCTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAAATCTTAGATAATGTCAACTATTATGCTGGCAGTAACTCTGAA  350

seq1  TATATGATAATGAAGAAACATTTTCATTAAACTTTTACTTGTTCACCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATAATGAAGAAACATTTTCATTAAACTTTTACTTGTTCACCCTC  400

seq1  AAATATTATATGATGAAGTCAGGTGTGAAAGCCAGAAGAATATGATGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTATATGATGAAGTCAGGTGTGAAAGCCAGAAGAATATGATGTTG  450

seq1  TGCAACAATTCATGGAGATAGAAATGATCCATTCCAAAAGGAAACTAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACAATTCATGGAGATAGAAATGATCCATTCCAAAAGGAAACTAAAT  500

seq1  AAAGAGTGTACTATCGCCTTCAAAATGTCTAATAAAACTGGCAGCATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTGTACTATCGCCTTCAAAATGTCTAATAAAACTGGCAGCATTTT  550

seq1  GTATATTTAATTCAAATGAAGAAATTGACACAGATTGTACTTGATAGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTTAATTCAAATGAAGAAATTGACACAGATTGTACTTGATAGTGT  600

seq1  ATTTGACAAACTGAGCCACCAAGACTGCATGTTCTTAATCCTATAATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACAAACTGAGCCACCAAGACTGCATGTTCTTAATCCTATAATATG  650

seq1  CCTACAGATGTGAAGTGTGCTTTGAGTATCCAGTATTCATTATTCTTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGATGTGAAGTGTGCTTTGAGTATCCAGTATTCATTATTCTTATC  700

seq1  ACGTCAATGTGACAAATGATTTATTGGTTTCACGTTTCAGGATAGTGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCAATGTGACAAATGATTTATTGGTTTCACGTTTCAGGATAGTGACT  750

seq1  GACTATGAGTCCCTTATGCTCTGTCAACATCTCCTTCCTCATTGCCCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATGAGTCCCTTATGCTCTGTCAACATCTCCTTCCTCATTGCCCTGT  800

seq1  AAATAAAGCTGAATATTTTAACAAGGTTGACTTGGCTGTTTTCAGTTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGCTGAATATTTTAACAAGGTTGACTTGGCTGTTTTCAGTTTGC  850

seq1  ACTTATAATTAGATGAATAAATGTTGCATCATCGCTGGAACTATTTCTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAATTAGATGAATAAATGTTGCATCATCGCTGGAACTATTTCTCA  900

seq1  TAAAGTATTTGCTGAAGTCATGAATATTTTCTGTAAACCTGTAACTTAAA  950
      |||||||||||||||||||||||||||||||||| |||||||||||| ||
seq2  TAAAGTATTTGCTGAAGTCATGAATATTTTCTGT-AACCTGTAACTT-AA  948

seq1  CTTAATATTTGTGATTGTCAGCTGGTCAATAACAACCTTGACCCACATAC  1000
      ||| |||||||||||||||||||||||||| ||||||||||||| |||||
seq2  CTT-ATATTTGTGATTGTCAGCTGGTCAAT-ACAACCTTGACCC-CATAC  995

seq1  GAATAATATGAATTGTATATAAGTGTTTAGCATTAGAAAATTTAGCAACA  1050
      |||| ||||||||||||||| ||||||||||||||||||| |||||||||
seq2  GAAT-ATATGAATTGTATAT-AGTGTTTAGCATTAGAAAA-TTAGCAACA  1042

seq1  GTGTATTAGAGATGATGATTTGTGTTAACTAAAACAGGGATGATTCTATG  1100
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTGTATTAGAGATGATGATTTGTGTTAACTAAAACA-GGATGATTCTATG  1091

seq1  CAATATTCCAGGCTTACTGCTCAATTAGTACTAG  1134
      | | | ||||||||||||||||||||||||||||
seq2  CCA-AATCCAGGCTTACTGCTCAATTAGTACTAG  1124