BAC Information

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BAC

Clone NameB6Ng01-014I24
Chromosome4 (Build37)1 (Build37)
Map Location 37,541,326 - 37,541,754103,233,011 - 103,233,703
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100042132, LOC545600, LOC621458
Downstream geneLOC277771, LOC100039448
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014I24.bB6Ng01-014I24.g
ACCDH849070DH849071
length849968
definitionDH849070|Mus musculus domesticus DNA, BAC clone: B6Ng01-014I24, 5' end.DH849071|Mus musculus domesticus DNA, BAC clone: B6Ng01-014I24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(37,541,326 - 37,541,754)(103,233,011 - 103,233,703)
sequence
gaattcacaccctcacaatctgtgatcaagagtaggcatggcatcaagaa
catgcaatcccactactgatgaggcagagacagaaggaacctgggatctt
aatgaaattgttctgtgagcttgacattcagtgaaagaccctaaatagaa
atgtaaattggaaagtaatatagggagacaccagacactactgagtccac
atttttctcagcaatgctaagcatattttccacaacaaatctcatgatgg
tccatgaaacagttcttagggacttaatgagatttaatatatgtcacata
cttttcttagcataagaacataaaatcccaaatgaaagtatgtaattcag
acccaaggctaggagttaaaatataagcattttttcattgtacttagcac
aatgagtaagaataaggacggaccatctagagactgccatatccagggat
ccatcccataatcagcctccaaacactgacaccattgcatacactagcaa
gattttgctgaaaggaccctgatacagctgtctcttgtgagactatgctg
gggcctagcaaacacagaagtggatgctcacagttagctattggatgatt
cacagggcccccaatggaggagctagagaaagtactcaaggagctaaagg
gatctgcaaccctataggtagaacaacaatatgaactaaccaaaccaccc
ggagtttgtgtctctagctgcatatgtatcagaaaaaggcctagtcggcc
atcagtggaaagagaggcccattggtcatgcaaactttatatgcctcagt
ataggggaacaccaggccaagaagtgggagtgagtggttaggggagtgg
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttaccttttgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcatgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctgagaagctctgtggctcttgtccggaaggaggc
cggccatctggagctgaggatggcgctgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgccgcccagaag
ctctgcgactctcgcccgtcccagaaacggctggcactctgtattccaca
cggtcacccgtgcagcctgccctccgcggagtcccagagccaagaaggct
cccgccggcgcctgtgccacaaacctctcggccaggcaggcccccgtgct
ctcaccaggaaggtggcccggctatctcttaattttctatttatatgttc
ctacagccttccttccattccattccatttgttccttttataaaacatag
actcaaggcctaatctgtgctagatttcgaaggagagggaaatgacaatt
attagttttcatggtactttcatatatttaatgtagagtggataaaagaa
ctactatggctattaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37541326_37541754
seq2: B6Ng01-014I24.b_467_893 (reverse)

seq1  CCACTCTCCTACCCACCCACTCCCACTTCTTGGACCTGGTGTTCCCCTAT  50
      |||||| |||| |||| |||||||||||||||| ||||||||||||||||
seq2  CCACTCCCCTAACCACTCACTCCCACTTCTTGG-CCTGGTGTTCCCCTAT  49

seq1  ACTGAGGCAAATGAAGATTGCACGACCAAAAGGCCTCTCTTTCCACTGAT  100
      ||||||||| || ||| ||||| ||||||  |||||||||||||||||||
seq2  ACTGAGGCATATAAAGTTTGCATGACCAATGGGCCTCTCTTTCCACTGAT  99

seq1  GGCCGACTAGGCCATCTGCTGCTACATATGCAGCTAGAGACACGAGCTCC  150
      ||||||||||||| | | ||| ||||||||||||||||||||| | ||||
seq2  GGCCGACTAGGCCTTTTTCTGATACATATGCAGCTAGAGACACAAACTCC  149

seq1  TGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGTGTTGCAGAC  200
       || |||  |||||||||||||||||||||| |||||||| |||||||| 
seq2  GGGTGGT-TTGGTTAGTTCATATTGTTGTTCTACCTATAGGGTTGCAGAT  198

seq1  CCCATTAGCTCCTTGGGTACTTTCTCTAGCTCCTAAATTGGGGGCCCTGT  250
      ||| ||||||||||| ||||||||||||||||||  ||||||||||||||
seq2  CCCTTTAGCTCCTTGAGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGT  248

seq1  GATCCAACCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCC  300
      ||  || ||||||||| |||||||||||||||||||||||||||||||||
seq2  GAATCATCCAATAGCTAACTGTGAGCATCCACTTCTGTGTTTGCTAGGCC  298

seq1  CCAGCATAGTTTCACAAGAGACAACTTTATCAGGGTCCTTTCAGCAAAAT  350
      |||||||||| |||||||||||| || |||||||||||||||||||||||
seq2  CCAGCATAGTCTCACAAGAGACAGCTGTATCAGGGTCCTTTCAGCAAAAT  348

seq1  CTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGAGGCTAATTATGGGATG  400
      |||||||||||||||||||||||||| ||||||||||| |||||||||||
seq2  CTTGCTAGTGTATGCAATGGTGTCAGTGTTTGGAGGCTGATTATGGGATG  398

seq1  GATCCCTGGATATGGCAGTCTCTAGATGG  429
      |||||||||||||||||||||||||||||
seq2  GATCCCTGGATATGGCAGTCTCTAGATGG  427

seq1: chr1_103233011_103233703
seq2: B6Ng01-014I24.g_344_1034

seq1  TCTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTT  50

seq1  TCAGGGAAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAG  100

seq1  GTGAAGGCCCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGCCCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAG  150

seq1  GAAGGTGGCCAGTTGTCTGGAGTCGAAGATGTCGCCGCCTGAGAAGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGGCCAGTTGTCTGGAGTCGAAGATGTCGCCGCCTGAGAAGCTCT  200

seq1  GTGGCTCTTGTCCGGAAGGAGGCCGGCCATCTGGAGCTGAGGATGGCGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCTTGTCCGGAAGGAGGCCGGCCATCTGGAGCTGAGGATGGCGCT  250

seq1  GCCTCAGAAGCTCTGTGGCTCTTGCCGGGAAGGTGGCTGGTTGTCTGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGAAGCTCTGTGGCTCTTGCCGGGAAGGTGGCTGGTTGTCTGGAG  300

seq1  CTGAAGATGGCGCCGCCCAGAAGCTCTGCGACTCTCGCCCGTCCCAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGATGGCGCCGCCCAGAAGCTCTGCGACTCTCGCCCGTCCCAGAAA  350

seq1  CGGCTGGCACTCTGTATTCCACACGGTCACCCGTGCAGCCTGCCCTCCGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTGGCACTCTGTATTCCACACGGTCACCCGTGCAGCCTGCCCTCCGC  400

seq1  GGAGTCCCAGAGCCAAGAAGGCTCCCGCCGGCGCCTGTGCCACAAACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCCAGAGCCAAGAAGGCTCCCGCCGGCGCCTGTGCCACAAACCTC  450

seq1  TCAGGCCAGGCAGGCCCCCGTGCTCTCACCAGGAAGGTGG-CCGGCTATC  499
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TC-GGCCAGGCAGGCCCCCGTGCTCTCACCAGGAAGGTGGCCCGGCTATC  499

seq1  TCTTAATTTTCTATTTAATATGTTCCTACAGCCTTCCTTCCATTCCATTC  549
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCTTAATTTTCTATTT-ATATGTTCCTACAGCCTTCCTTCCATTCCATTC  548

seq1  AATTTGTTCC-TTTATAAAACATAGACTC-AGGACTAATCTGTGCTAGAT  597
       ||||||||| |||||||||||||||||| ||| ||||||||||||||||
seq2  CATTTGTTCCTTTTATAAAACATAGACTCAAGGCCTAATCTGTGCTAGAT  598

seq1  TTCGAAGGAGAGGGAAAATGACAAATATTAGTTTTCATGGTACTTTCATA  647
      |||||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  TTCGAAGGAGAGGG-AAATGACAATTATTAGTTTTCATGGTACTTTCATA  647

seq1  TATTTAATGTAGAGTGGAATTAAAAGAACTAACTAT-GCTATTAAAA  693
      ||||||||||||||||||  |||||||||| ||||| ||||||||||
seq2  TATTTAATGTAGAGTGGA--TAAAAGAACT-ACTATGGCTATTAAAA  691