BAC Information

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BAC

Clone NameB6Ng01-014K19
Chromosome4 (Build37)
Map Location 139,244,136 - 139,388,496
singlet/doubletdoublet
Overlap genePax7
Upstream geneUbxd3, Pla2g2c, Pla2g2f, Pla2g2d, Pla2g5, Pla2g2a, Pla2g2e, Otud3, Rnf186, Tmco4, Htr6, LOC665683, Nbl1, 2310028O11Rik, Hspe1-ps4, 9530077C14Rik, Capzb, Pqlc2, LOC100042808, Akr7a5, LOC625977, LOC626000, Mrto4, C230096C10Rik, Zubr1, C79267, Aldh4a1, Tas1r2
Downstream geneGm1667, Klhdc7a, Igsf21, LOC100040728, Arhgef10l, Rcc2, Padi6, Padi4, Padi3, Padi1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014K19.bB6Ng01-014K19.g
ACCDH849150DH849151
length8661,185
definitionDH849150|Mus musculus domesticus DNA, BAC clone: B6Ng01-014K19, 5' end.DH849151|Mus musculus domesticus DNA, BAC clone: B6Ng01-014K19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(139,387,629 - 139,388,496)(139,244,136 - 139,245,305)
sequence
catctggtccgttttgcgctccggtaaattccagggtttcccactcttct
ctgacacaacagagttcccgggtctctgcgcagcgccgccggctttcttc
cctagttttgaattggtccctcaaagtcgggatggggtccctccaacccc
ttttatttcgaaataccaacaagcgacactctatttccactccaccagac
cgtccgcttcctcccaagcaacttactaactggcttttttttttcccggc
cccgacacaaactaattaaaaacaatgcatagtgccttatttcccgcaaa
aacaaaaacaaaaaaattaaaaacataacttttccctacgtctttctaaa
gtctgcaaatgtcccgggaaagaaactcaagaccaaaagagggtacagca
atccaggggactgttttgagtctctagccactcggggatgcagaggggac
cggccggcggcgatcggccgggagaggagaaagggcccctttgcgcgccc
cctcccttttctatttaaacctatggaaggctttcagccagtcaccgaag
ggtcttctagtttcctcggctcagacagcccatggtgtctcaggagcagt
tagaaacggcgtgccaattttattttttagccgcccctcttgtcattgtg
tgggccccacttgtgggtgcgggaggatggggagagaaggcgagaagggg
cggtctggcagccggcgatctatggagggagccccctccctcgggcagcg
agaagccgccgggtccccgaataagacagaggcgaagagagcgggctgcg
tgatcagtgcgcgcgagcggccacgcaggcgggagagcgcgcagcgggga
tttgccgggagtcctc
gaattcacacacagagagttaaacaaagaggcctgtggtcaggcgtggtc
tgtatttaaccaagaacaatgtcatgagcctgtggagggaggcacgaagg
gccgagtactcagaaaggtgccaagggtgggtgggggcctctgggtgatt
ctgttcccaatcaggatcagtgggctcagcgtggacgtcctaagatatga
cctggcttcacaagataaatctgtcttaggtctcagttcctggtctaacc
tcagctcaccggactttctgtatgtccctggactggctccaccccaagaa
acacccaaggcctccccccccccgcccctcccggcctctaagccttttga
ttccttcctgctgtttaggtgagtccagagagtaattctggacagtccat
agcaagtaggtggaagcctctcagagggcacctgggaggtaggaggctgg
catgtgtcaccgagggatgaggtatatttcaggacatttcctgattacct
gctctcctttccaccttcctgtttgcacctgcctcccacctgggcctgtt
acagtgcacctgcctcccacctgggcctgttacagtgcacctgcttccca
cctgggcctgttacagtacacctgcctcccacctgggcctgttacagtgc
acctgcctcccacctgagccttttacactgcacctgcctgccacctgggc
ctttacactgcacctgcctcccacctgggcctgttacactgcacctgcct
cccatctgggcctgttacagtgcacctgcctcccacctgagccttttaca
ctgcacctgcctgcaacctgggcctgttacagtggcacctgcctcccacc
tgggcctgtttacactgcacctggcctgccacctggggcctggtacagtg
acctggcttcccacctggctgttacagtgctccttgcctcacactgggcc
acatcatggctggctgaggcattggagcttcaacaagacatatccacttg
tgcagcctctgcacatgctttccattctggattatccatgttcaaagatg
tggtggcgaaacgagaaggaacttgcttcttctcaaagttccaacgctac
tcgaagcagaagagacatgctgtcgtatgacatgagagggatttgtgtcg
ctccatagtgacacccaaccttactactggggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_139387629_139388496
seq2: B6Ng01-014K19.b_53_918 (reverse)

seq1  GAGGACT-CCGGCAAATCCCCGGCTGCCGCGCTCTCCCGCCTGCGTGGCC  49
      ||||||| ||||||||||||| |||| |||||||||||||||||||||||
seq2  GAGGACTCCCGGCAAATCCCC-GCTG-CGCGCTCTCCCGCCTGCGTGGCC  48

seq1  GCTCGCGCGCACTTGATCACGCAGCCCGCTCTCTTCGCCTCTGTCTAATT  99
      |||||||||||| ||||||||||||||||||||||||||||||||| |||
seq2  GCTCGCGCGCAC-TGATCACGCAGCCCGCTCTCTTCGCCTCTGTCTTATT  97

seq1  CGGGGACCCGGCGGCTTCTCGCTGCCCGAGGGAGGGGGCTCCCTCCCTAG  149
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CGGGGACCCGGCGGCTTCTCGCTGCCCGAGGGAGGGGGCTCCCTCCATAG  147

seq1  ATCGCCGGCTGCCAGACCGCCCCTTCTCGCCTTCTCTCCCCATCCTCCCG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCCGGCTGCCAGACCGCCCCTTCTCGCCTTCTCTCCCCATCCTCCCG  197

seq1  CACCCACAAGTGGGGCCCACACAATGACAAGAGGGGCGGCTAAAAAATAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACAAGTGGGGCCCACACAATGACAAGAGGGGCGGCTAAAAAATAA  247

seq1  AATTGGCACGCCGTTTCTAACTGCTCCTGAGACACCATGGGCTGTCTGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGCACGCCGTTTCTAACTGCTCCTGAGACACCATGGGCTGTCTGAG  297

seq1  CCGAGGAAACTAGAAGACCCTTCGGTGACTGGCTGAAAGCCTTCCATAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGAAACTAGAAGACCCTTCGGTGACTGGCTGAAAGCCTTCCATAGG  347

seq1  TTTAAATAGAAAAGGGAGGGGGCGCGCAAAGGGGCCCTTTCTCCTCTCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAGAAAAGGGAGGGGGCGCGCAAAGGGGCCCTTTCTCCTCTCCC  397

seq1  GGCCGATCGCCGCCGGCCGGTCCCCTCTGCATCCCCGAGTGGCTAGAGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGATCGCCGCCGGCCGGTCCCCTCTGCATCCCCGAGTGGCTAGAGAC  447

seq1  TCAAAACAGTCCCCTGGATTGCTGTACCCTCTTTTGGTCTTGAGTTTCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACAGTCCCCTGGATTGCTGTACCCTCTTTTGGTCTTGAGTTTCTT  497

seq1  TCCCGGGACATTTGCAGACTTTAGAAAGACGTAGGGAAAAGTTATGTTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGGACATTTGCAGACTTTAGAAAGACGTAGGGAAAAGTTATGTTTT  547

seq1  TAATTTTTTTGTTTTTGTTTTTGCGGGAAATAAGGCACTATGCATTGTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTTTGTTTTTGTTTTTGCGGGAAATAAGGCACTATGCATTGTTT  597

seq1  TTAATTAGTTTGTGTCGGGGCCGGGAAAAAAAAAAGCCAGTTAGTAAGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAGTTTGTGTCGGGGCCGGGAAAAAAAAAAGCCAGTTAGTAAGTT  647

seq1  GCTTGGGAGGAAGCGGACGGTCTGGTGGAGTGGAAATAGAGTGTCGCTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGAGGAAGCGGACGGTCTGGTGGAGTGGAAATAGAGTGTCGCTTG  697

seq1  TTGGTATTTCGAAATAAAAGGGGTTGGAGGGACCCCATCCCGACTTTGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATTTCGAAATAAAAGGGGTTGGAGGGACCCCATCCCGACTTTGAG  747

seq1  GGACCAATTCAAAACTAGGGAAGAAAGCCGGCGGCGCTGCGCAGAGACCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAATTCAAAACTAGGGAAGAAAGCCGGCGGCGCTGCGCAGAGACCC  797

seq1  GGGAACTCTGTTGTGTCAGAGAAGAGTGGGAAACCCTGGAATTTACCGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTCTGTTGTGTCAGAGAAGAGTGGGAAACCCTGGAATTTACCGGA  847

seq1  GCGCAAAACGGACCAGATG  868
      |||||||||||||||||||
seq2  GCGCAAAACGGACCAGATG  866

seq1: chr4_139244136_139245305
seq2: B6Ng01-014K19.g_68_1252

seq1  GAATTCACACACAGAGAGTTAAACAAAGAGGCCTGTGGTCAGGCGTGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACACAGAGAGTTAAACAAAGAGGCCTGTGGTCAGGCGTGGTC  50

seq1  TGTATTTAACCAAGAACAATGTCATGAGCCTGTGGAGGGAGGCACGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTAACCAAGAACAATGTCATGAGCCTGTGGAGGGAGGCACGAAGG  100

seq1  GCCGAGTACTCAGAAAGGTGCCAAGGGTGGGTGGGGGCCTCTGGGTGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAGTACTCAGAAAGGTGCCAAGGGTGGGTGGGGGCCTCTGGGTGATT  150

seq1  CTGTTCCCAATCAGGATCAGTGGGCTCAGCGTGGACGTCCTAAGATATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCCAATCAGGATCAGTGGGCTCAGCGTGGACGTCCTAAGATATGA  200

seq1  CCTGGCTTCACAAGATAAATCTGTCTTAGGTCTCAGTTCCTGGTCTAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTCACAAGATAAATCTGTCTTAGGTCTCAGTTCCTGGTCTAACC  250

seq1  TCAGCTCACCGGACTTTCTGTATGTCCCTGGACTGGCTCCACCCCAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCACCGGACTTTCTGTATGTCCCTGGACTGGCTCCACCCCAAGAA  300

seq1  ACACCCAAGGCCTCCCCCCCCCCGCCCCTCCCGGCCTCTAAGCCTTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCAAGGCCTCCCCCCCCCCGCCCCTCCCGGCCTCTAAGCCTTTTGA  350

seq1  TTCCTTCCTGCTGTTTAGGTGAGTCCAGAGAGTAATTCTGGACAGTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTGCTGTTTAGGTGAGTCCAGAGAGTAATTCTGGACAGTCCAT  400

seq1  AGCAAGTAGGTGGAAGCCTCTCAGAGGGCACCTGGGAGGTAGGAGGCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTAGGTGGAAGCCTCTCAGAGGGCACCTGGGAGGTAGGAGGCTGG  450

seq1  CATGTGTCACCGAGGGATGAGGTATATTTCAGGACATTTCCTGATTACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTCACCGAGGGATGAGGTATATTTCAGGACATTTCCTGATTACCT  500

seq1  GCTCTCCTTTCCACCTTCCTGTTTGCACCTGCCTCCCACCTGGGCCTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCTTTCCACCTTCCTGTTTGCACCTGCCTCCCACCTGGGCCTGTT  550

seq1  ACAGTGCACCTGCCTCCCACCTGGGCCTGTTACAGTGCACCTGCTTCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGCACCTGCCTCCCACCTGGGCCTGTTACAGTGCACCTGCTTCCCA  600

seq1  CCTGGGCCTGTTACAGTACACCTGCCTCCCACCTGGGCCTGTTACAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCCTGTTACAGTACACCTGCCTCCCACCTGGGCCTGTTACAGTGC  650

seq1  ACCTGCCTCCCACCTGAGCCTTTTACACTGCACCTGCCTGCCACCTGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCTCCCACCTGAGCCTTTTACACTGCACCTGCCTGCCACCTGGGC  700

seq1  CTTTTACACTGCACCTGCCTCCCACCTGGGCCTGTTACACTGCACCTGCC  750
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTTACACTGCACCTGCCTCCCACCTGGGCCTGTTACACTGCACCTGCC  749

seq1  TCCCATCTGGGCCTGTTACAGTGCACCTGCCTCCCACCTGAGCCTTTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCTGGGCCTGTTACAGTGCACCTGCCTCCCACCTGAGCCTTTTAC  799

seq1  ACTGCACCTGCCTGCCACCTGGGCCTGTTACAGT-GCACCTGCCTCCCAC  849
      ||||||||||||||| |||||||||||||||||| |||||||||||||||
seq2  ACTGCACCTGCCTGCAACCTGGGCCTGTTACAGTGGCACCTGCCTCCCAC  849

seq1  CTGGGCCTG-TTACACTGCACCT-GCCTGCCACCT-GGGCCTGTTACAGT  896
      ||||||||| ||||||||||||| ||||||||||| ||||||| ||||||
seq2  CTGGGCCTGTTTACACTGCACCTGGCCTGCCACCTGGGGCCTGGTACAGT  899

seq1  GCACCT-GCCTCCCACCTGGGCCTGTTACAGTGCTCC-TGCCTCACACCT  944
      | |||| || ||||||||||  ||||||||||||||| ||||||||| ||
seq2  G-ACCTGGCTTCCCACCTGG--CTGTTACAGTGCTCCTTGCCTCACA-CT  945

seq1  GGGCCCACATCATGGCTGGCTGAGGGCATGGAGCTCCAACAAGACATATC  994
      ||| |||||||||||||||||||||   ||||||| ||||||||||||||
seq2  GGG-CCACATCATGGCTGGCTGAGGCATTGGAGCTTCAACAAGACATATC  994

seq1  CACTT-TGCAGCCTCTGCACCAGTGCTTCCCATTCTG--ATATCCATGTG  1041
      ||||| ||||||||||||||   ||||| ||||||||   ||||||||| 
seq2  CACTTGTGCAGCCTCTGCAC--ATGCTTTCCATTCTGGATTATCCATGTT  1042

seq1  CAGAAAGTGGGTGGCGAACAGAGAGGGAACTGCCTTCT--CCAAAGTCAC  1089
      || | |   |||||||||  |||| ||||||  |||||   ||||||  |
seq2  CAAAGATGTGGTGGCGAAACGAGAAGGAACTTGCTTCTTCTCAAAGTTCC  1092

seq1  ACAGCTACCGGAGGCAG-AGAGACA-GTTCTGGAAAGACAAG-GAAGGAA  1136
      |  |||||  || |||| ||||||| | | | | | |||| | || ||| 
seq2  AACGCTACTCGAAGCAGAAGAGACATGCTGTCGTATGACATGAGAGGGAT  1142

seq1  GTTTG-----CTAT-GTGAC-CCCAACCATA--ACTGGGGTTG  1170
       | ||     | || ||||| ||||||| ||  ||||||||||
seq2  TTGTGTCGCTCCATAGTGACACCCAACCTTACTACTGGGGTTG  1185