BAC Information

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BAC

Clone NameB6Ng01-017C24
Chromosome4 (Build37)
Map Location 133,387,971 - 133,388,584
singlet/doubletsinglet
Overlap genenone
Upstream genePpp1r8, Stx12, OTTMUSG00000010099, BC008163, Fgr, Ahdc1, LOC100041932, Wasf2, Gpr3, Cd164l2, Fcnc-ps, Map3k6, Sytl1, D4Ertd196e, LOC100041990, LOC100042018, Wdtc1, Slc9a1, 4732473B16Rik, 2300002D11Rik, 1810019J16Rik, Nudc, Nr0b2, Gpatch3, Atpbd1b, Sfn, Zdhhc18, LOC545683, Pigv, Arid1a
Downstream geneRps6ka1, 4930429E23Rik, LOC100042151, Hmgn2, Dhdds, Lin28, Aim1l, Cd52, Ubxd5, Sh3bgrl3, Ccdc21, EG665186, Catsper4, Cnksr1, Zfp593, Grrp1, Pdik1l, Trim63, Slc30a2, Extl1, LOC434166, Pafah2, Stmn1, Paqr7, 2610002D18Rik, 2410166I05Rik, Sepn1, Man1c1, Ldlrap1, Tmem57
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017C24.bB6Ng01-017C24.g
ACCDH850942DH850943
length889620
definitionDH850942|Mus musculus domesticus DNA, BAC clone: B6Ng01-017C24, 5' end.DH850943|Mus musculus domesticus DNA, BAC clone: B6Ng01-017C24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtctctgggacttacatggtggaaaggaaaaacttgcacctga
aaaaatgtcctttgacttgtgaggtggaaatttctggtttctctggaaga
ttcagctgtggtatgagacatttttctggaaactgtcttttgagaggatg
ttttgctgaggcaatcacatgggagggtattttgctgtgaacggacatgt
agtgtttttcttgaggttgcctgggaagggggcatgcgatgttttgctgg
agtggacaattgtttggaaaagtgcaaggatgacccaacagaccatgaac
agcagtgctgcgtggcattggtttgccttgccttcctggttgagcatcct
ttgtcttcttgacattgtggagagaaatgcaccaaagaacttaatggtgg
tgtttgggcggcttcttcctccttccaatgactcagggccgattggcaga
ccctcacagttctgaatcaaactgccattgctgatttgtgaacagtgttc
gggggcgggccgttgccgctgtcgatccatgtgaactgaaccgccgctat
cctcacaatgaaggttgataccaccccgcaaaaacctatttctaaacagg
tccatatcttcctttaccctattaaccttctcttcccactatctctagtg
ggtggtgggctagaaggtaggttaaagcattttagtatccttattaaact
aggacttgaaaaatatgtctacagacccctatatgtacatcatggtgtgt
ttgacccacccgcctacacacatgtctgcacacatgataagtgaacataa
ttaaaaaaaatatttattatatgtaagtacactatagttgtcttcagaca
caccagaagagggcatcaaactccatttacagatggttg
gaattcatcagaagctctggttagctgactcagctaaagagacagggagc
aatcacgttggctggactggtttatatcagtacttcaactttcaacagcc
cagggctcctagccatttagaacagtttgtagcctgtagctgatttctca
atggtgtctgtccagtggaaatctgcacagacagacagacagacagacta
gggactgaagttcaagttaatgaacttaaattaaaaatcttacattttct
tttaagttttcaggaccatagtcctggtagttgggggaaaggaggagtcc
caaaactgaggagagagagagatattccatcttcaggaatgggcagatgg
ggaaacatatgctctacttatctggagtccatttgactcatgaaagcagg
atccaagttttaagatttttctcagatccttaaatagttttagtttacaa
aagagatgaaagttttcaaatatattagcattatctgtgttggtgtattt
acttagctaatttattgaattattatctactgctcttccaacctatattc
cacccgaatccctcccaatctcccaatactaggtgggagagaaagaaagt
tagaggggaaaggggttgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_133387971_133388584
seq2: B6Ng01-017C24.b_309_923

seq1  CAAGGATGACCCAACAGACCATGAACAGCAGTGCTGCGTGGCATTGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATGACCCAACAGACCATGAACAGCAGTGCTGCGTGGCATTGGTTT  50

seq1  GCCTTGCCTTCCTGGTTGAGCATCCTTTGTCTTCTTGACATTGTGGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCCTTCCTGGTTGAGCATCCTTTGTCTTCTTGACATTGTGGAGAG  100

seq1  AAATGCACCAAAGAACTTAATGGTGGTGTTTGGGCGGCTTCTTCCTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCACCAAAGAACTTAATGGTGGTGTTTGGGCGGCTTCTTCCTCCTT  150

seq1  CCAATGACTCAGGGCCGATTGGCAGACCCTCACAGTTCTGAATCAAACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGACTCAGGGCCGATTGGCAGACCCTCACAGTTCTGAATCAAACTG  200

seq1  CCATTGCTGATTTGTGAACAGTGTTCGGGGGCGGGCCGTTGCCGCTGTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCTGATTTGTGAACAGTGTTCGGGGGCGGGCCGTTGCCGCTGTCG  250

seq1  ATCCATGTGAACTGAACCGCCGCTATCCTCACAATGAAGGTTGATACCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGTGAACTGAACCGCCGCTATCCTCACAATGAAGGTTGATACCAC  300

seq1  CCCGCAAAAACCTATTTCTAAACAGGTCCATATCTTCCTTTACCCTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCAAAAACCTATTTCTAAACAGGTCCATATCTTCCTTTACCCTATTA  350

seq1  ACCTTCTCTTCCCACTATCTCTAGTGGGTGGTGGGCTAGAAGGTAGGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTCTTCCCACTATCTCTAGTGGGTGGTGGGCTAGAAGGTAGGTTA  400

seq1  AAGCATTTTAGTATCCTTATTAAACTAGGACTTGAAAAATATGTCTACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTTTAGTATCCTTATTAAACTAGGACTTGAAAAATATGTCTACAG  450

seq1  ACCCCTATATGTACATCATGGTGTGTTTGACCCACCCGCCTACACACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTATATGTACATCATGGTGTGTTTGACCCACCCGCCTACACACATG  500

seq1  TCTGCACACATGATAAGTGAACATAATTAAAAAAAATATTTATTATATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACACATGATAAGTGAACATAATTAAAAAAAATATTTATTATATGT  550

seq1  AAGTACACTATAGTTGTCTTCAGACACACCAGAAGAGGGCATCAAACTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACACTATAGTTGTCTTCAGACACACCAGAAGAGGGCATCAAACTCC  600

seq1  A-TTACAGATGGTTG  614
      | |||||||||||||
seq2  ATTTACAGATGGTTG  615