BAC Information

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BAC

Clone NameB6Ng01-017F22
Chromosome4 (Build37)
Map Location 132,178,153 - 132,290,903
singlet/doubletdoublet
Overlap geneEya3, Xkr8, Smpdl3b
Upstream geneLOC100039799, Ptpru, Mecr, Sfrs4, EG664865, EG623230, Epb4.1, LOC666480, LOC100039835, Oprd1, LOC664894, Ythdf2, LOC664903, Gmeb1, Rnu11, Taf12, 9530096D07Rik, LOC100039864, Trspap1, Rcc1, Snhg3, Phactr4, Med18, Sesn2, Atpif1, Dnajc8, Ptafr
Downstream geneRpa2, BC013712, LOC100039917, Ppp1r8, Stx12, OTTMUSG00000010099, BC008163, Fgr, Ahdc1, LOC100041932, Wasf2, Gpr3, Cd164l2, Fcnc-ps, Map3k6, Sytl1, D4Ertd196e, LOC100041990, LOC100042018, Wdtc1, Slc9a1, 4732473B16Rik, 2300002D11Rik, 1810019J16Rik, Nudc, Nr0b2, Gpatch3, Atpbd1b, Sfn, Zdhhc18, LOC545683, Pigv, Arid1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017F22.bB6Ng01-017F22.g
ACCDH851075DH851076
length759847
definitionDH851075|Mus musculus domesticus DNA, BAC clone: B6Ng01-017F22, 5' end.DH851076|Mus musculus domesticus DNA, BAC clone: B6Ng01-017F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,290,150 - 132,290,903)(132,178,153 - 132,179,003)
sequence
gaattctttctgcctcctggatgtcccaccttctactctaccctctccta
taggccataggtcttctaattgacaggtgatacatccatacaatatacag
catattctctctacataaagtaaatcttttaaaaagtactcttaaacaca
aagccatgtcttctgctcccgtctgaggaatggaagaaagaaagaaagaa
agaaagaaagaaagaaagaaagaaagaaagagaaaactggtgtgtgtgtg
tgtgacttgacaaggttagttcttgccttctatctgtcatgccttccact
gtgtggattttagggatccatcttgttggccccaggcctgaggatttgta
agagtctagcctattgtctacacgctcgattcactgctttctctgtaccc
tggaaagtcacaggactgaggggacttagtgcaacaatgccatgtgcctg
gcacatgcaggtcccacccattcacccagctcctcttaccggcctgtctg
aaggcactgctgagtctttgaacgggaaacctttatcagctacaatttca
taacatccgtcagccaggcaacccccacccccaccccgctgccgcctccc
ccacctttcccacctcctccaccaccatttttattccccttcactctgtg
aagattttcctgagcatttagagcgtctgtgaagagcgcgtggtgcctac
cagtttggcagaacaggaaactcataccccgtagtgaggtgaacattctg
cgtcctaaa
gaattcaggtcatcaggcttggtggcaagtgcctttaccagatgagccat
ttcacaggcctaacacctcttaaagtcccagcaccactacaaggccacac
tcaagaccaagctccagcatgggaagctgttgggagacaaagctactgcc
acagggcagcagccacttatagtgaatggtaaagccgagatggaggctgg
atcagctccccgccaaagctctggcttaactgagccattaatctctagaa
tggaatagataaagtcccattcttgctgatgctaccaacaggggccacgg
catggaggtggatagagctcactcagacctggtgcttagaagcagcgtgg
gtggctcataggggccttgggacaaagcaagttgaatgtcatcaaagttc
ttgggtcccgagtaggtggaaagaagcaaggccacgcgacatccattggt
ttctctccagattgacttagaaaccttgagggagagccttgtccacacgg
acatgaggctggaccagagagctggcgctttgggggatgcctgatgctgc
agagggtgttcctgtctggacttgagccctactttcctgcaaaatggaga
caggtgtgttcaaatagcagatcctaattacgatgttacaagcattcagt
tagcacatataatgaaaagttagctcggcatgctggacagtgagtgttct
gtggtgtccagctcagcctgcatagaactgtgcgcttaagttttctatgg
ggttaggtttttttgtttttttgttgtttgtttccttgccgaagctctac
ctccactgcccgccctgacaggggatgtgactttcccaccttgcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_132290150_132290903
seq2: B6Ng01-017F22.b_46_803 (reverse)

seq1  TTAGGACGCAGAATGTTCACCTCACTAC-GGGTATGAGTTTCCTGTTCTG  49
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTAGGACGCAGAATGTTCACCTCACTACGGGGTATGAGTTTCCTGTTCTG  50

seq1  CCAAACTGGTAGGCACCACGCGCTCTTCACAGACGCTCT-AATGCTCAGG  98
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCAAACTGGTAGGCACCACGCGCTCTTCACAGACGCTCTAAATGCTCAGG  100

seq1  -AAATCTTCACAGAGTGAAGGGGAATAAAAATGGTGGTGGAGGAGGTGGG  147
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTCACAGAGTGAAGGGGAATAAAAATGGTGGTGGAGGAGGTGGG  150

seq1  -AAGGTGGGGGAGGCGGCAGCGGGGTGGGGGTGGGGGTTGCCTGGCTGGC  196
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAAGGTGGGGGAGGCGGCAGCGGGGTGGGGGTGGGGGTTGCCTGGCTGAC  200

seq1  GGATGTTATGAAATTGTAGCTGATAAAGGTTTCCCGTTCAAAGACTCAGC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTATGAAATTGTAGCTGATAAAGGTTTCCCGTTCAAAGACTCAGC  250

seq1  AGTGCCTTCAGACAGGCCGGTAAGAGGAGCTGGGTGAATGGGTGGGACCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTTCAGACAGGCCGGTAAGAGGAGCTGGGTGAATGGGTGGGACCT  300

seq1  GCATGTGCCAGGCACATGGCATTGTTGCACTAAGTCCCCTCAGTCCTGTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGCCAGGCACATGGCATTGTTGCACTAAGTCCCCTCAGTCCTGTG  350

seq1  ACTTTCCAGGGTACAGAGAAAGCAGTGAATCGAGCGTGTAGACAATAGGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCAGGGTACAGAGAAAGCAGTGAATCGAGCGTGTAGACAATAGGC  400

seq1  TAGACTCTTACAAATCCTCAGGCCTGGGGCCAACAAGATGGATCCCTAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCTTACAAATCCTCAGGCCTGGGGCCAACAAGATGGATCCCTAAA  450

seq1  ATCCACACAGTGGAAGGCATGACAGATAGAAGGCAAGAACTAACCTTGTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACACAGTGGAAGGCATGACAGATAGAAGGCAAGAACTAACCTTGTC  500

seq1  AAGTCACACACACACACACCAGTTTTCTCTTTCTTTCTTTCTTTCTTTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACACACACACACACCAGTTTTCTCTTTCTTTCTTTCTTTCTTTCT  550

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTCCATTCCTCAGACGGGAGCAGAAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTCCATTCCTCAGACGGGAGCAGAAGA  600

seq1  CATGGCTTTGTGTTTAAGAGTACTTTTTAAAAGATTTACTTTATGTAGAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTTTGTGTTTAAGAGTACTTTTTAAAAGATTTACTTTATGTAGAG  650

seq1  AGAATATGCTGTATATTGTATGGATGTATCACCTGTCAATTAGAAGACCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATGCTGTATATTGTATGGATGTATCACCTGTCAATTAGAAGACCT  700

seq1  ATGGCCTATAGGAGAGGGTAGAGTAGAAGGTGGGACATCCAGGAGGCAGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTATAGGAGAGGGTAGAGTAGAAGGTGGGACATCCAGGAGGCAGA  750

seq1  AAGAATTC  754
      ||||||||
seq2  AAGAATTC  758

seq1: chr4_132178153_132179003
seq2: B6Ng01-017F22.g_66_912

seq1  GAATTCAGGTCATCAGGCTTGGTGGCAAGTGCCTTTACCAGATGAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCATCAGGCTTGGTGGCAAGTGCCTTTACCAGATGAGCCAT  50

seq1  TTCACAGGCCTAACACCTCTTAAAGTCCCAGCACCACTACAAGGCCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGGCCTAACACCTCTTAAAGTCCCAGCACCACTACAAGGCCACAC  100

seq1  TCAAGACCAAGCTCCAGCATGGGAAGCTGTTGGGAGACAAAGCTACTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACCAAGCTCCAGCATGGGAAGCTGTTGGGAGACAAAGCTACTGCC  150

seq1  ACAGGGCAGCAGCCACTTATAGTGAATGGTAAAGCCGAGATGGAGGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCAGCAGCCACTTATAGTGAATGGTAAAGCCGAGATGGAGGCTGG  200

seq1  ATCAGCTCCCCGCCAAAGCTCTGGCTTAACTGAGCCATTAATCTCTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTCCCCGCCAAAGCTCTGGCTTAACTGAGCCATTAATCTCTAGAA  250

seq1  TGGAATAGATAAAGTCCCATTCTTGCTGATGCTACCAACAGGGGCCACGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAGATAAAGTCCCATTCTTGCTGATGCTACCAACAGGGGCCACGG  300

seq1  CATGGAGGTGGATAGAGCTCACTCAGACCTGGTGCTTAGAAGCAGCGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGGTGGATAGAGCTCACTCAGACCTGGTGCTTAGAAGCAGCGTGG  350

seq1  GTGGCTCATAGGGGCCTTGGGACAAAGCAAGTTGAATGTCATCAAAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCATAGGGGCCTTGGGACAAAGCAAGTTGAATGTCATCAAAGTTC  400

seq1  TTGGGTCCCGAGTAGGTGGAAAGAAGCAAGGCCACGCGACATCCATTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTCCCGAGTAGGTGGAAAGAAGCAAGGCCACGCGACATCCATTGGT  450

seq1  TTCTCTCCAGATTGACTTAGAAACCTTGAGGGAGAGCCTTGTCCACACGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCAGATTGACTTAGAAACCTTGAGGGAGAGCCTTGTCCACACGG  500

seq1  ACATGAGGCTGGACCAGAGAGCTGGCGCTTTGGGGGATGCCTGATGCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGGCTGGACCAGAGAGCTGGCGCTTTGGGGGATGCCTGATGCTGC  550

seq1  AGAGGGTGTTCCTGTCTGGACTTGAGCCCTACTTTCCTGCAAAATGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTGTTCCTGTCTGGACTTGAGCCCTACTTTCCTGCAAAATGGAGA  600

seq1  CAGGTGTGTTCAAATAGCAGATCCTAATTACGATGTTACAAGCATTCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTGTTCAAATAGCAGATCCTAATTACGATGTTACAAGCATTCAGT  650

seq1  TAGCACATATAATGAAAAGTTAGCTCGGCATGCTGGACAGTGAGTGTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACATATAATGAAAAGTTAGCTCGGCATGCTGGACAGTGAGTGTTCT  700

seq1  GTGGTGTCCAGCTCAGCCTGCATAGAACTGTGCGCTTAAGTTTTCTATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTCCAGCTCAGCCTGCATAGAACTGTGCGCTTAAGTTTTCTATGG  750

seq1  GGTTAGGTTTTTTTGTTTTTTTGTTTGTTTGTTTCCTTTGCCGAAGCTCT  800
      ||||||||||||||||||||||| |||||||||||| |||||||||||||
seq2  GGTTAGGTTTTTTTGTTTTTTTG-TTGTTTGTTTCC-TTGCCGAAGCTCT  798

seq1  TCCTCCCACTGCCTGCCCTGGCAGGGGAATGTGACATTCTCACCTTGCAC  850
       ||| |||||||| |||||| |||||| ||||||| ||| ||||||||||
seq2  ACCT-CCACTGCCCGCCCTGACAGGGG-ATGTGACTTTCCCACCTTGCAC  846

seq1  T  851
      |
seq2  T  847