BAC Information

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BAC

Clone NameB6Ng01-018O17
Chromosome4 (Build37)
Map Location 112,084,878 - 112,085,986
singlet/doubletsinglet
Overlap geneA030013N09Rik
Upstream gene2310026E23Rik, Spata6, LOC621612, Slc5a9, LOC639774, C130057D23Rik, LOC639781, 9530098N22Rik, A430090E18Rik
Downstream geneLOC665949, LOC630887, OTTMUSG00000008540, LOC100040581, A030001H23Rik, LOC433745, LOC545668, LOC230622, LOC100040607
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018O17.bB6Ng01-018O17.g
ACCDH852178DH852179
length1,1091,232
definitionDH852178|Mus musculus domesticus DNA, BAC clone: B6Ng01-018O17, 5' end.DH852179|Mus musculus domesticus DNA, BAC clone: B6Ng01-018O17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatataaactatgtctagatttggactcttgaatattattttcc
cattaaaactactgttttgtctcatctagaaaacaacatgtatcgctttg
ggggtaaaaagtagattagaatttttctgtatgtgtcttttaggataaga
ggatttaaggtaacaggggaaaggccatattctaaatacaaaaatagaga
aaagctccaggaagcatgagagtgatgacaaggcagcttaaaggcataga
agtagggtgactacacacagagaagcaggaaacagcctccagtcccatgc
tatatagtgtagggagacataaaaccaaagtttcaaccacaaggatgcct
ggaattctgtgatagactgatgatccttgagttaccataagccttaagtt
tattgtgtgttggggagggaaagctttgatgtgatagtcagtcctcttgc
atgtctggccagtattgaagaaaaaaaaatcattttgctgctttatatgt
ctcaaaaaaacatacacaagctctgagctagcagtttgacacatcctctt
gtaccatccacagtgattgtctcatcagtggcccagaaacaatggagcaa
gacaatcttggaataacctgtctaaaatcacaagccaaaataaggcattc
ctcataacatattttatattagttaattcatttactttacatcccaacca
cagttttccctccttcctcttttccaagtccttcccccctgtaaaacccc
tccatctattcctcctcctgtaaaactcagaaaaagggaggcttcccact
gatatcaccctgactttgcatatcaagtttcagtaaaaccaggctaattt
cctcctattgaggcaggaagaggcaggccagtaaagggcaaagggtccca
aaggcaggcagcagagtcagatatagccccttgctaccaccattagagtc
ccacatggagaccacgttgcacaactatttacatatatttgagggcctat
gtcaggtccatgaatgcttccttataagcagtaattctttgtggcctccc
tatgagcccaggttaatgataccggaagggttatttctctttttagtggt
gtcctggac
gaattcaataaaaatgaatgtacaacatatccaaatatataggacatgat
gaaagcagtgcaaagaggaaagttcatataacattcataaggaaattgga
gagttctcttactaatgatttaaaaatacatctgaaagctctaggggaaa
aaagaagcaaacacactcaagaggagtagacaccaggaaataatcaaact
cagtgctgaaatcaatacattagaaacaaagaattaagtacagggaatca
agaaaatccaaagctggttcttggagaaaatcatcaagatagacaacccc
ttagcctaactcaacaaacgactgaaagacaatatccaaataaacaaaat
aaaaaatgagaatggaaacataacaacagacaatgaggaaattcaaggaa
tcattaggtcttacaccaaaagcctatactccccaaaattagaacatctt
aatgaaatggattattttctagatagataccaaaataataataataataa
taataataaataaataaataaataaataaataaataaatgcccaaatggc
tttaggtttaagtgcaaaactttaccagaccttcaaaaccacctaatacc
aacacttttcaaactagaaacataaagagcattgccaaacttattctatg
aggctacaaacatcctgatacctaattcctgatacgtattcaacaaagaa
agagaattgcagatcaatttaccttatgaacttttgatagaaaattactc
agtaaaatactcccaaactgaattcaggaacacatcaagaacattatcca
ccacagtaaagtaggcttttattccagggatgcaggaatggttcaagata
aagatctgtgaatgcaatcaaccacaaaaataaactgaaaaaaagaaagg
aaccaacacagatcatctcttgtatgtggaaaatccttttgacaaaatcc
cactccccttctttgaaaagtcatgagagatcagtgctacaaagcacata
cattaacacattaaaggcataaagagcaaaccatagccattatgaaattt
aatgagacaaacttaagcaattctactagatcaggaagcagctgttccct
cattctccctatcttgcaatatattactgagaatccatgctcggggccat
aagacataatggaatcataaatatcattggaagggcagcagaatccaagg
gtctacggtctcaacgagatgtagcaacgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_112084878_112085986
seq2: B6Ng01-018O17.b_47_1155 (reverse)

seq1  GTCCAGGACACCACAAAAAAAGAAAAATAAACCCTACAGTATCAACTAAC  50
      ||||||||||||||  ||||||| |||||| || | | ||||| | ||||
seq2  GTCCAGGACACCAC-TAAAAAGAGAAATAACCCTTCCGGTATC-ATTAAC  48

seq1  CTGGGCTCATAGGGA-GCCACAGAGAATTAACTGCCTATAAGGGAGCATT  99
      ||||||||||||||| |||||| |||||| ||||| ||||||| ||||||
seq2  CTGGGCTCATAGGGAGGCCACAAAGAATT-ACTGCTTATAAGGAAGCATT  97

seq1  CATGGACCTGACATAGGCCCTCAAATATATGT-AATAGTTGTGCAACGTG  148
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CATGGACCTGACATAGGCCCTCAAATATATGTAAATAGTTGTGCAACGTG  147

seq1  GTCTCCATGTGGGACTCCTAATGGTGGTAGC-AGGGGCTATATCTGACTC  197
      |||||||||||||||| |||||||||||||| ||||||||||||||||||
seq2  GTCTCCATGTGGGACT-CTAATGGTGGTAGCAAGGGGCTATATCTGACTC  196

seq1  TGCTGCCTGCCTTTGGGACCCTTTGCCC-TTACTGGCCTGCCTCTTCCTG  246
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGCTGCCTGCCTTTGGGACCCTTTGCCCTTTACTGGCCTGCCTCTTCCTG  246

seq1  CCTCAATAGGAGGAAATTAGCCTGGTTTTACTGAAACTTGATATGCAAAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATAGGAGGAAATTAGCCTGGTTTTACTGAAACTTGATATGCAAAG  296

seq1  TCAGGGTGATATCAGTGGGAAGCCTCCCTTTTTCTGAGTTTTACAGGAGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTGATATCAGTGGGAAGCCTCCCTTTTTCTGAGTTTTACAGGAGG  346

seq1  AGGAATAGATGGAGGGGTTTTACAGGGGGGAAGGACTTGGAAAAGAGGAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAGATGGAGGGGTTTTACAGGGGGGAAGGACTTGGAAAAGAGGAA  396

seq1  GGAGGGAAAACTGTGGTTGGGATGTAAAGTAAATGAATTAACTAATATAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAAAACTGTGGTTGGGATGTAAAGTAAATGAATTAACTAATATAA  446

seq1  AATATGTTATGAGGAATGCCTTATTTTGGCTTGTGATTTTAGACAGGTTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTATGAGGAATGCCTTATTTTGGCTTGTGATTTTAGACAGGTTA  496

seq1  TTCCAAGATTGTCTTGCTCCATTGTTTCTGGGCCACTGATGAGACAATCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGATTGTCTTGCTCCATTGTTTCTGGGCCACTGATGAGACAATCA  546

seq1  CTGTGGATGGTACAAGAGGATGTGTCAAACTGCTAGCTCAGAGCTTGTGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGATGGTACAAGAGGATGTGTCAAACTGCTAGCTCAGAGCTTGTGT  596

seq1  ATGTTTTTTTGAGACATATAAAGCAGCAAAATGATTTTTTTTTCTTCAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTTTGAGACATATAAAGCAGCAAAATGATTTTTTTTTCTTCAAT  646

seq1  ACTGGCCAGACATGCAAGAGGACTGACTATCACATCAAAGCTTTCCCTCC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCAGACATGCAAGAGGACTGACTATCACATCAAAGCTTTCCCTCC  696

seq1  CCAACACACAATAAACTTAAGGCTTATGGTAACTCAAGGATCATCAGTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACACAATAAACTTAAGGCTTATGGTAACTCAAGGATCATCAGTCT  746

seq1  ATCACAGAATTCCAGGCATCCTTGTGGTTGAAACTTTGGTTTTATGTCTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGAATTCCAGGCATCCTTGTGGTTGAAACTTTGGTTTTATGTCTC  796

seq1  CCTACACTATATAGCATGGGACTGGAGGCTGTTTCCTGCTTCTCTGTGTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACACTATATAGCATGGGACTGGAGGCTGTTTCCTGCTTCTCTGTGTG  846

seq1  TAGTCACCCTACTTCTATGCCTTTAAGCTGCCTTGTCATCACTCTCATGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACCCTACTTCTATGCCTTTAAGCTGCCTTGTCATCACTCTCATGC  896

seq1  TTCCTGGAGCTTTTCTCTATTTTTGTATTTAGAATATGGCCTTTCCCCTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGAGCTTTTCTCTATTTTTGTATTTAGAATATGGCCTTTCCCCTG  946

seq1  TTACCTTAAATCCTCTTATCCTAAAAGACACATACAGAAAAATTCTAATC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTAAATCCTCTTATCCTAAAAGACACATACAGAAAAATTCTAATC  996

seq1  TACTTTTTACCCCCAAAGCGATACATGTTGTTTTCTAGATGAGACAAAAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTACCCCCAAAGCGATACATGTTGTTTTCTAGATGAGACAAAAC  1046

seq1  AGTAGTTTTAATGGGAAAATAATATTCAAGAGTCCAAATCTAGACATAGT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTTTAATGGGAAAATAATATTCAAGAGTCCAAATCTAGACATAGT  1096

seq1  TTATATGGAATTC  1109
      |||||||||||||
seq2  TTATATGGAATTC  1109