BAC Information

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BAC

Clone NameB6Ng01-021P08
Chromosome4 (Build37)
Map Location 49,606,560 - 49,716,898
singlet/doubletdoublet
Overlap gene2810432L12Rik, LOC100040742, Rnf20, Ppp3r2
Upstream geneTmeff1, 2310039E09Rik, E130309F12Rik, LOC666602, Rbpsuh-ps1, C730036D15Rik, LOC100040919, LOC666617, Rbpsuh-ps2, LOC230161, Baat, Mrpl50, Zfp189, Aldob
Downstream geneLOC666663
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021P08.bB6Ng01-021P08.g
ACCDH854322DH854323
length347890
definitionDH854322|Mus musculus domesticus DNA, BAC clone: B6Ng01-021P08, 5' end.DH854323|Mus musculus domesticus DNA, BAC clone: B6Ng01-021P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,716,552 - 49,716,898)(49,606,560 - 49,607,451)
sequence
attaatatgactatttttgagaggtgtatatatggggactatttatatta
atcctagatattcttgtatgcccttctgtctcctggttgtcaaaatagac
tctttttctatttcttcccccatgtatatggaatgaaaactctgatacca
tgagccaaagtatataacttctccatcaactaaccctctctagaagtgcc
ttcacatacacacccaatggtgtactttcctagtctcctaggcactgctc
agtccaatcaagttgacaattaagattcaccatcacatgcagtttcactg
ggaaagatggctagggaatcccagacctggggggggggacgggggga
gaattcagctctgatagtctttccaacagcacattccttacacatagcaa
ctcaaccatggaaaaacagatcaagaggtacaggtcccttctaaacaaca
gcctggtttccccgacagaactgaccaccttttccttacacattggggct
ttcctcagagcatttagctgtcactttcggctttagattgtacagccgtc
cctcgggatccaaggtggattggttctagaactttcactcctcagaatac
caaaatctgaaggtgcttagattctttatataaactgtcacagtctttat
gtgctcggtctgcacttcttaaatacattacattagctctaatactggtc
agaacgcaggacgctatggtttttgtttagggaagaataacaataaaaat
taatacaaacgtgtttgatttaaagaaaatttcatttcttggatcatttt
cgatctgaagttagctgggtccacagatacgaaccccgaggtacggagta
gaatatctactttcagagatttattacatcctctctgcacactccagggt
gtgttagaccctttgattccatttggaccaattggctctcagatagcaat
atgatttaatcctgttttaggtggaaaaaagattctatcaatccataagc
aggaaattcaaagcccacacactgcccgtgtttgcctgatgccttttcac
gactttactcataacccttcactcaacaaccctttaagtcccttcttctt
ttttttgtttggttttttgttgtttttcgagacaggttttctcttatacc
ctggctatcctgaaattcactttgtagaccagctggcctcgaactcagaa
atccactgcctctgcctttgcctctgagtgctgggattaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_49716552_49716898
seq2: B6Ng01-021P08.b_49_395 (reverse)

seq1  TCCCCCCGTCCCCCCCCCCAGGTCTGGGATTCCCTAGCCATCTTTCCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCGTCCCCCCCCCCAGGTCTGGGATTCCCTAGCCATCTTTCCCAG  50

seq1  TGAAACTGCATGTGATGGTGAATCTTAATTGTCAACTTGATTGGACTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTGCATGTGATGGTGAATCTTAATTGTCAACTTGATTGGACTGAG  100

seq1  CAGTGCCTAGGAGACTAGGAAAGTACACCATTGGGTGTGTATGTGAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCTAGGAGACTAGGAAAGTACACCATTGGGTGTGTATGTGAAGGC  150

seq1  ACTTCTAGAGAGGGTTAGTTGATGGAGAAGTTATATACTTTGGCTCATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTAGAGAGGGTTAGTTGATGGAGAAGTTATATACTTTGGCTCATGG  200

seq1  TATCAGAGTTTTCATTCCATATACATGGGGGAAGAAATAGAAAAAGAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAGTTTTCATTCCATATACATGGGGGAAGAAATAGAAAAAGAGTC  250

seq1  TATTTTGACAACCAGGAGACAGAAGGGCATACAAGAATATCTAGGATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGACAACCAGGAGACAGAAGGGCATACAAGAATATCTAGGATTAA  300

seq1  TATAAATAGTCCCCATATATACACCTCTCAAAAATAGTCATATTAAT  347
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATAGTCCCCATATATACACCTCTCAAAAATAGTCATATTAAT  347

seq1: chr4_49606560_49607451
seq2: B6Ng01-021P08.g_69_958

seq1  GAATTCAGCTCTGATAGTCTTTCCAACAGCACATTCCTTACACATAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTCTGATAGTCTTTCCAACAGCACATTCCTTACACATAGCAA  50

seq1  CTCAACCATGGAAAAACAGATCAAGAGGTACAGGTCCCTTCTAAACAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCATGGAAAAACAGATCAAGAGGTACAGGTCCCTTCTAAACAACA  100

seq1  GCCTGGTTTCCCCGACAGAACTGACCACCTTTTCCTTACACATTGGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTTTCCCCGACAGAACTGACCACCTTTTCCTTACACATTGGGGCT  150

seq1  TTCCTCAGAGCATTTAGCTGTCACTTTCGGCTTTAGATTGTACAGCCGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAGAGCATTTAGCTGTCACTTTCGGCTTTAGATTGTACAGCCGTC  200

seq1  CCTCGGGATCCAAGGTGGATTGGTTCTAGAACTTTCACTCCTCAGAATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGGATCCAAGGTGGATTGGTTCTAGAACTTTCACTCCTCAGAATAC  250

seq1  CAAAATCTGAAGGTGCTTAGATTCTTTATATAAACTGTCACAGTCTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCTGAAGGTGCTTAGATTCTTTATATAAACTGTCACAGTCTTTAT  300

seq1  GTGCTCGGTCTGCACTTCTTAAATACATTACATTAGCTCTAATACTGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCGGTCTGCACTTCTTAAATACATTACATTAGCTCTAATACTGGTC  350

seq1  AGAACGCAGGACGCTATGGTTTTTGTTTAGGGAAGAATAACAATAAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGCAGGACGCTATGGTTTTTGTTTAGGGAAGAATAACAATAAAAAT  400

seq1  TAATACAAACGTGTTTGATTTAAAGAAAATTTCATTTCTTGGATCATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACAAACGTGTTTGATTTAAAGAAAATTTCATTTCTTGGATCATTTT  450

seq1  CGATCTGAAGTTAGCTGGGTCCACAGATACGAACCCCGAGGTACGGAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCTGAAGTTAGCTGGGTCCACAGATACGAACCCCGAGGTACGGAGTA  500

seq1  GAATATCTACTTTCAGAGATTTATTACATCCTCTCTGCACACTCCAGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCTACTTTCAGAGATTTATTACATCCTCTCTGCACACTCCAGGGT  550

seq1  GTGTTAGACCC-TTGATTCCATTTGGACCAATTGGCTCTCAGATAGCAAT  599
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGACCCTTTGATTCCATTTGGACCAATTGGCTCTCAGATAGCAAT  600

seq1  ATGATTTAATCCTG-TTTAGGTGGAAAAAAGATTCTATCAATCCATAAGC  648
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATGATTTAATCCTGTTTTAGGTGGAAAAAAGATTCTATCAATCCATAAGC  650

seq1  AGGAAATTCAAAGCCCACACACTGCCCGTG-TTGCCTGATGCC-TTTCAC  696
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  AGGAAATTCAAAGCCCACACACTGCCCGTGTTTGCCTGATGCCTTTTCAC  700

seq1  GACTTTACTCATAACCCTTCACTCAACAACCCTTTAAGTCCCTTCTTCTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTACTCATAACCCTTCACTCAACAACCCTTTAAGTCCCTTCTTCTT  750

seq1  TTTTTTGTTTGTTTTTTTGTTTGTTTTTCGAGACAGGGTTTCTCTTTATA  796
      ||||||||||| ||||||| ||||||||||||||||| |||||| |||| 
seq2  TTTTTTGTTTGGTTTTTTG-TTGTTTTTCGAGACAGGTTTTCTC-TTAT-  797

seq1  ACCCTGGCTATCCTGAAACTCACTTTGTAGACCAGGCTGGCCTCGAACTC  846
      |||||||||||||||||| ||||||||||||||| |||||||||||||||
seq2  ACCCTGGCTATCCTGAAATTCACTTTGTAGACCA-GCTGGCCTCGAACTC  846

seq1  AGAAATCCACCTGCCTCTGCCTCTGCCTCCTGAGTGCTGGGATTAA  892
      ||||||||| |||||||||||| ||||| |||||||||||||||||
seq2  AGAAATCCA-CTGCCTCTGCCTTTGCCT-CTGAGTGCTGGGATTAA  890