BAC Information

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BAC

Clone NameB6Ng01-026G02
Chromosome4 (Build37)
Map Location 149,049,408 - 149,153,750
singlet/doubletdoublet
Overlap genePik3cd, D4Ertd429e, Slc25a33
Upstream geneLOC100041733, LOC100041742, LOC100041755, Casz1, Pex14, LOC670864, Dffa, Cort, Apitd1, LOC666774, Pgd, Kif1b, LOC100041794, Ube4b, Rbp7, LOC627985, Nmnat1, Lzic, Ctnnbip1, Clstn1
Downstream geneSpsb1, H6pd, Gpr157, Slc2a5, LOC435818, Car6, LOC100041882, Eno1, LOC666880, LOC384091, Rere, Slc45a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026G02.bB6Ng01-026G02.g
ACCDH857443DH857444
length725328
definitionDH857443|Mus musculus domesticus DNA, BAC clone: B6Ng01-026G02, 5' end.DH857444|Mus musculus domesticus DNA, BAC clone: B6Ng01-026G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,153,027 - 149,153,750)(149,049,408 - 149,049,735)
sequence
gaattcctgatcctgtagcctctacctcctgagtgaaggaccacgggtca
gacaggtaggcagggaggaagggcagcgacgctctaggtagattaatatg
ctctccacttagacaaaaaaaggtggttagctttcttgaagacaagggtt
tgctgcctgttttcctgccagggagaacttctcagtggcatttttgaaga
agggtacgctagattggtttcctatgctgaggaccaatcagcttctcctt
ctttgtctagattactggccctgtgctagcccaaaccagccagtcctgat
gcaaaaagggagccagtaccccccaaacataagaatgtttgtctctgaga
ttaaactccgacactaccttaggtctccttcccacctaagaagctgtctc
tctatgtgctttgttctctctctctctctctctctctgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtctgtctgtctgtctgtctgtctgtctgcgcacg
cacttctgcttttaataaaacttggctggccgggccgggcagtggtggcc
acgcctttaatcccagcacttgggaggcagaggcaggtggatttctgagt
tcaaggccagcctggtctacagagggagttccaggacagccaaggctaca
cagagaaactctgtctcggggggcgggagggaaccacttttggctgaggg
gagctggagaatggctccctggtta
aggacgggagataaggagccaggaaaaaatgcacccgggattattcaggc
agggctaagtcccatggcggaagaccagtaggacctccgagcctgggtat
gacttcggttagcccctcttggttcaagggcaaagctagggatggagcgg
gagcgagccgactgatgggtaagggaatcggggacagggggagggggtgg
acggggagcgcgcaccgaactgcttcggttccagagaagtaaacagctcg
tcctcctaagcaaagcgcgtcctccttgggagcccactgagggtctggca
tctagggtggcaggagacacactcagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_149153027_149153750
seq2: B6Ng01-026G02.b_46_770 (reverse)

seq1  TAACCAGGGAGCCATCTCTCCAGCT-CCCTCAGCC-AAAGTGGTTCCCTC  48
      ||||||||||||||| ||||||||| ||||||||| ||||||||||||||
seq2  TAACCAGGGAGCCAT-TCTCCAGCTCCCCTCAGCCAAAAGTGGTTCCCTC  49

seq1  CCGCCCCCCGAGACAGAGTTTCTCTGTGTAGCCTTGGCTGTCCTGGAACT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCCCCCGAGACAGAGTTTCTCTGTGTAGCCTTGGCTGTCCTGGAACT  99

seq1  CCCTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCACCTGCCTCTGC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCACCTGCCTCTGC  149

seq1  CTCCCAAGTGCTGGGATTAAAGGCGTGGCCACCACTGCCCGGCCCGGCCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAGTGCTGGGATTAAAGGCGTGGCCACCACTGCCCGGCCCGGCCA  199

seq1  GCCAAGTTTTATTAAAAGCAGAAGTGCGTGCGCAGACAGACAGACAGACA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTTTTATTAAAAGCAGAAGTGCGTGCGCAGACAGACAGACAGACA  249

seq1  GACAGACAGACACACACACACACACACACACACACACACAGAGAGAGAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACAGACACACACACACACACACACACACACACACAGAGAGAGAGA  299

seq1  GAGAGAGAGAGAACAAAGCACATAGAGAGACAGCTTCTTAGGTGGGAAGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAACAAAGCACATAGAGAGACAGCTTCTTAGGTGGGAAGG  349

seq1  AGACCTAAGGTAGTGTCGGAGTTTAATCTCAGAGACAAACATTCTTATGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTAAGGTAGTGTCGGAGTTTAATCTCAGAGACAAACATTCTTATGT  399

seq1  TTGGGGGGTACTGGCTCCCTTTTTGCATCAGGACTGGCTGGTTTGGGCTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGGTACTGGCTCCCTTTTTGCATCAGGACTGGCTGGTTTGGGCTA  449

seq1  GCACAGGGCCAGTAATCTAGACAAAGAAGGAGAAGCTGATTGGTCCTCAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGGCCAGTAATCTAGACAAAGAAGGAGAAGCTGATTGGTCCTCAG  499

seq1  CATAGGAAACCAATCTAGCGTACCCTTCTTCAAAAATGCCACTGAGAAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGAAACCAATCTAGCGTACCCTTCTTCAAAAATGCCACTGAGAAGT  549

seq1  TCTCCCTGGCAGGAAAACAGGCAGCAAACCCTTGTCTTCAAGAAAGCTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTGGCAGGAAAACAGGCAGCAAACCCTTGTCTTCAAGAAAGCTAA  599

seq1  CCACCTTTTTTTGTCTAAGTGGAGAGCATATTAATCTACCTAGAGCGTCG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTTTTTTGTCTAAGTGGAGAGCATATTAATCTACCTAGAGCGTCG  649

seq1  CTGCCCTTCCTCCCTGCCTACCTGTCTGACCCGTGGTCCTTCACTCAGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTTCCTCCCTGCCTACCTGTCTGACCCGTGGTCCTTCACTCAGGA  699

seq1  GGTAGAGGCTACAGGATCAGGAATTC  724
      ||||||||||||||||||||||||||
seq2  GGTAGAGGCTACAGGATCAGGAATTC  725

seq1: chr4_149049408_149049735
seq2: B6Ng01-026G02.g_73_400

seq1  AGGACGGGAGATAAGGAGCCAGGAAAAAATGCACCCGGGATTATTCAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGGGAGATAAGGAGCCAGGAAAAAATGCACCCGGGATTATTCAGGC  50

seq1  AGGGCTAAGTCCCATGGCGGAAGACCAGTAGGACCTCCGAGCCTGGGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTAAGTCCCATGGCGGAAGACCAGTAGGACCTCCGAGCCTGGGTAT  100

seq1  GACTTCGGTTAGCCCCTCTTGGTTCAAGGGCAAAGCTAGGGATGGAGCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCGGTTAGCCCCTCTTGGTTCAAGGGCAAAGCTAGGGATGGAGCGG  150

seq1  GAGCGAGCCGACTGATGGGTAAGGGAATCGGGGACAGGGGGAGGGGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGAGCCGACTGATGGGTAAGGGAATCGGGGACAGGGGGAGGGGGTGG  200

seq1  ACGGGGAGCGCGCACCGAACTGCTTCGGTTCCAGAGAAGTAAACAGCTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGGAGCGCGCACCGAACTGCTTCGGTTCCAGAGAAGTAAACAGCTCG  250

seq1  TCCTCCTAAGCAAAGCGCGTCCTCCTTGGGAGCCCACTGAGGGTCTGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTAAGCAAAGCGCGTCCTCCTTGGGAGCCCACTGAGGGTCTGGCA  300

seq1  TCAAGGGCGGCAGGAGACACACCCAGAT  328
      || |||| |||||||||||||| |||||
seq2  TCTAGGGTGGCAGGAGACACACTCAGAT  328