BAC Information

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BAC

Clone NameB6Ng01-026I13
Chromosome4 (Build37)
Map Location 116,393,273 - 116,500,924
singlet/doubletdoublet
Overlap geneTesk2, Toe1, Mutyh, Hpdl
Upstream gene4732418C07Rik, 4930544O15Rik, Atpaf1, Mobkl2c, Mknk1, Kncn, 6430628N08Rik, Dmbx1, Faah, Nsun4, Uqcrh, Lrrc41, Rad54l, 1520402A15Rik, Pomgnt1, Tspan1, 1700042G07Rik, LOC433748, Pik3r3, Mast2, LOC631400, Ipp, Tmem69, Gpbp1l1, LOC622665, Nasp, Akr1a4, Prdx1, Mmachc, 0610037D15Rik
Downstream geneLOC625336, LOC100041048, Zswim5, Urod, Hectd3, Eif2b3, Ptch2, 9530048O09Rik, LOC100041324, 4833401D15Rik, Plk3, Best4-ps, LOC625405, Rps8, Kif2c, Gm1661, Tmem53, 4931406I20Rik, LOC100041093, Prnpip1, Dmap1, LOC433749, Klf17, Ppia-ps4_1138.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026I13.bB6Ng01-026I13.g
ACCDH857550DH857551
length869240
definitionDH857550|Mus musculus domesticus DNA, BAC clone: B6Ng01-026I13, 5' end.DH857551|Mus musculus domesticus DNA, BAC clone: B6Ng01-026I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,500,057 - 116,500,924)(116,393,273 - 116,393,512)
sequence
gaattccaggctatcctgtaagagagtactcattgtgagactgagattct
gtctccttgaggggaaaaaaaaaacaagtgaagaacaccactggcgaatc
accatccaggttccttcttgggtttagcactcagttttctttgaagtgtc
taaaattcagccctgaagaatctggggtggtaagtcaccaccctatcaaa
gcagcctttccagggaggagggagatttcaaatctcggggaagaatctgg
gttgtacatcacccctcccagcttgctgggagggtagaccagaccagcac
ctctcctggaagcaagggcaagagctggttaaaatgaggccaatggtgac
acctagaggtcatatgaaaaactgcaactttcgaacgacctatttggccc
ttaagggctttatttagttggttcattcataaatattcactgacctctca
acacatgccaactcttatgctagacactaagcaaaagtccgaaggatctg
agaagacatttcagtcaactgggatttacgccgatgtctactgatcaaga
aaatgtttaccaggtcagtccaagggaaaacattcaggcagcaaagacaa
gagcttgggtggtagcataaaatctcacaggattgccaggcatggtggcg
cacgccttttaaccccagcactcggggaggcagaggcaggcagatttctg
agtttcgaggccagcctggtctacaaagtgagtttccaggacagccaggg
ctatacagagaaacccctgtctcgaatccccccccccaaaacaaaaacaa
aataaacaaacaaaaaaccctcacaggatctatttatattaagggggatg
agaatattaatacaaacta
tctccggttccgctttttcaacacactgtcccctctgtttttaactccac
tctcttcctattggttcccttcatcttctaagagttggcgccgagcgttg
ctgattggcttttctgtacgcccattgtgcccaccctcgtaccacgtggc
attcctaacgttaattgggcaactctattagctcgtttgtcaaaggttga
cgattgattggctgctctgagggaggcctgaggagggggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_116500057_116500924
seq2: B6Ng01-026I13.b_45_913 (reverse)

seq1  TAGTTTGTTATTAATATTCTCATCCCCCATAATATAATTAGATCCTGTGA  50
      ||||||| |||||||||||||||||||| |||||||| ||||||||||||
seq2  TAGTTTG-TATTAATATTCTCATCCCCCTTAATATAAATAGATCCTGTGA  49

seq1  GGGTTTTTTTGTTTGTTTATTTTGTTTTTTGTTTTTGGGGGGGGGGATTC  100
      ||| |||||||||||||||||||||||||   ||||||||||||||||||
seq2  GGG-TTTTTTGTTTGTTTATTTTGTTTTT--GTTTTGGGGGGGGGGATTC  96

seq1  GAGACA-GGGTTTCTCTGTATAGCCCTGGCTGTCCTGG-AACTCACTTTG  148
      |||||| ||||||||||||||||||||||||||||||| |||||||||||
seq2  GAGACAGGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAAACTCACTTTG  146

seq1  TAGACCAGGCTGGCCTCG-AACTCAGAAATCTGCCTGCCTCTGCCT-CCC  196
      |||||||||||||||||| ||||||||||||||||||||||||||| |||
seq2  TAGACCAGGCTGGCCTCGAAACTCAGAAATCTGCCTGCCTCTGCCTCCCC  196

seq1  GAGTGCTGGGGTT-AAAGGCGTGCGCCACCATGCCTGGCAATCCTGTGAG  245
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGGGGTTAAAAGGCGTGCGCCACCATGCCTGGCAATCCTGTGAG  246

seq1  ATTTTATGCTACCACCCAAGCTCTTGTCTTTGCTGCCTGAATGTTTTCCC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATGCTACCACCCAAGCTCTTGTCTTTGCTGCCTGAATGTTTTCCC  296

seq1  TTGGACTGACCTGGTAAACATTTTCTTGATCAGTAGACATCGGCGTAAAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTGACCTGGTAAACATTTTCTTGATCAGTAGACATCGGCGTAAAT  346

seq1  CCCAGTTGACTGAAATGTCTTCTCAGATCCTTCGGACTTTTGCTTAGTGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTGACTGAAATGTCTTCTCAGATCCTTCGGACTTTTGCTTAGTGT  396

seq1  CTAGCATAAGAGTTGGCATGTGTTGAGAGGTCAGTGAATATTTATGAATG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCATAAGAGTTGGCATGTGTTGAGAGGTCAGTGAATATTTATGAATG  446

seq1  AACCAACTAAATAAAGCCCTTAAGGGCCAAATAGGTCGTTCGAAAGTTGC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAACTAAATAAAGCCCTTAAGGGCCAAATAGGTCGTTCGAAAGTTGC  496

seq1  AGTTTTTCATATGACCTCTAGGTGTCACCATTGGCCTCATTTTAACCAGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTCATATGACCTCTAGGTGTCACCATTGGCCTCATTTTAACCAGC  546

seq1  TCTTGCCCTTGCTTCCAGGAGAGGTGCTGGTCTGGTCTACCCTCCCAGCA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCCTTGCTTCCAGGAGAGGTGCTGGTCTGGTCTACCCTCCCAGCA  596

seq1  AGCTGGGAGGGGTGATGTACAACCCAGATTCTTCCCCGAGATTTGAAATC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGAGGGGTGATGTACAACCCAGATTCTTCCCCGAGATTTGAAATC  646

seq1  TCCCTCCTCCCTGGAAAGGCTGCTTTGATAGGGTGGTGACTTACCACCCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCTCCCTGGAAAGGCTGCTTTGATAGGGTGGTGACTTACCACCCC  696

seq1  AGATTCTTCAGGGCTGAATTTTAGACACTTCAAAGAAAACTGAGTGCTAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTTCAGGGCTGAATTTTAGACACTTCAAAGAAAACTGAGTGCTAA  746

seq1  ACCCAAGAAGGAACCTGGATGGTGATTCGCCAGTGGTGTTCTTCACTTGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGAAGGAACCTGGATGGTGATTCGCCAGTGGTGTTCTTCACTTGT  796

seq1  TTTTTTTTTCCCCTCAAGGAGACAGAATCTCAGTCTCACAATGAGTACTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCCCCTCAAGGAGACAGAATCTCAGTCTCACAATGAGTACTC  846

seq1  TCTTACAGGATAGCCTGGAATTC  868
      |||||||||||||||||||||||
seq2  TCTTACAGGATAGCCTGGAATTC  869

seq1: chr4_116393273_116393512
seq2: B6Ng01-026I13.g_74_313

seq1  TCTCCGGTTCCGCTTTTTCAACACACTGTCCCCTCTGTTTTTAACTCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCGGTTCCGCTTTTTCAACACACTGTCCCCTCTGTTTTTAACTCCAC  50

seq1  TCTCTTCCTATTGGTTCCCTTCATCTTCTAAGAGTTGGCGCCGAGCGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCCTATTGGTTCCCTTCATCTTCTAAGAGTTGGCGCCGAGCGTTG  100

seq1  CTGATTGGCTTTTCTGTACGCCCATTGTGCCCACCCTCGTACCACGTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGGCTTTTCTGTACGCCCATTGTGCCCACCCTCGTACCACGTGGC  150

seq1  ATTCCTAACGTTAATTGGGCAACTCTATTAGCTCGTTTGTCAAAGGTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTAACGTTAATTGGGCAACTCTATTAGCTCGTTTGTCAAAGGTTGA  200

seq1  CGATTGATTGGCTGCTCTGAGGGAGGCCTGAGGAGGGGGC  240
      ||||||||||||||||||||||||||||||||||||||||
seq2  CGATTGATTGGCTGCTCTGAGGGAGGCCTGAGGAGGGGGC  240