BAC Information

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BAC

Clone NameB6Ng01-026P21
Chromosome4 (Build37)
Map Location 146,823,209 - 146,824,274
singlet/doubletsinglet
Overlap genenone
Upstream geneRex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701
Downstream geneOTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026P21.bB6Ng01-026P21.g
ACCDH857863DH857864
length1,2611,057
definitionDH857863|Mus musculus domesticus DNA, BAC clone: B6Ng01-026P21, 5' end.DH857864|Mus musculus domesticus DNA, BAC clone: B6Ng01-026P21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaatggagcaactgtggaaggctgagaaacttcaaaagaaatg
tcaaagtccttagggatcagcaaaataaatatatatcaaagcaacactga
gattccaccttaccccaatcagaatggctaagataaaaactcaggtgaca
gcacatgctggccaaaatgtggagaaagaggatcactcctccattgcttg
tggaattgaaaactggtgaaaccattctggaaatcaatctggaacttcct
cagaaaattggaaatagatatacctgaaaacccagctataccactcttgg
gcatatacacaaatgatgccccaccatgacacaggggcttgtgttccact
atgttcagagttgccttgtttgtgataaccagaagctggaaacaaaccag
ataccccacaatgggcaaactgatacagaaatatggttcattttcacaat
ggaatattattcatctattgagaacaatgacatcatgagctttgcaggca
aatggactgaactagcaaattccatcctgatgaggtaactcagacccaaa
aggacatgcatagtgtgtactcactaataaatggatatcagcccaaaaaa
agtatatcatacaacctaaatgactaaagaaggttaaaaagctcaaggtt
ccaagtgaatacgtctcaatcccacttgggagagagaagaaagcagtcat
ggggaaaaaaggaagaagggacctgagtgggagcagggtcagagagggga
agtggaaacatgatcaggaattgtgaaggatgtgggggaggactgaagcc
ctgaggctcagcagaaaataatggaaatatacagcctcaggaggtaggct
atcgaggtccatctcgcaggttccaaagacctaggaggtgagagactccc
aggactcaaagggagagaccttggataaagtgctctacagtggcgagggg
gaacttgtagagtccacctccagtggagggacaggtatcaagtggaggtg
tgtctaatgcataatcttgatcaggattgttcctattgaaggactgcagg
tacaaacttgaaagaacatgaagaaggatgtctcacgacagctaattaga
ttcaatcagaagggaatcccagccttgactgtaacttgtggtgtaacgga
atggcatgctgtgcccctaaaaactactagcactctgatcgaagtcgatc
cgcatctcacatgagatgtagtctcacctcttgtgtgatgtgaagcgaac
tgccctgatag
gaattccaggaagctgttgaattttgggcgggtccagaaggcggggttag
gcagaatgagggaaaattccgcggtttaacctttcttcttgcatctctgc
tgcctcatggtcaggaagtcctggcgggagactagtgcctagtatttgcg
gtgcctgaaaactttcttaaggagcagttgttttgctggcctcctaggac
atattggagctggtcctgtcatcttccaggtcagaggagctgttggactg
ggaaacgggcaggagcttggcaggcctgtggagcaggggtgcattttctg
ccgccattctcacaattcagtgtttgcggaccggaaaacttccttaagct
gcagttgctcctcctaggacactgagcagctggtcctgtcacctttcagg
tcagaggagctgttggactggggaacgggcaggagctgagcaggggcgtg
gagcaggggttcattttctgccgcaactctcataattctgttgtggatat
cttaccattgtcaagaagtttgagatcctgtgaattgggttcatgattgg
tttaatcaattttatggttgccagaatatttttctaaaatatcctcggag
atccttggctgcatctggagttggtataccgggaggtttgcctttgcaaa
agcctttataaaactcctgtaattcaaattcgttcatgctttcttaactc
ccctgttcctccatttgccatttaatttccctttctccagggaactgagt
aggcatcccgagagagctttgtaagtatttgtcatatagggaccagtgca
gatttgattgaattcgaaatattcgttataaagtatctttgaaagaccca
aaacgtgaggactctcccacgttctgactcaggagaggagacattccaaa
tcacttgcaagaaagggtcttgatgcaaattgtagaggactttatttcag
agaactctcagtccacattcatataccatgcagggctagaggactgtggt
gtgcaagtagctgggtaagggggtattaaggaagaaaccttagtccaggg
gatgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146823209_146824274
seq2: B6Ng01-026P21.g_69_1125

seq1  GAATTCCAGGAAGCTGTTGAATTTTGGGCGGGTCCAGAAGGCGGGGTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGAAGCTGTTGAATTTTGGGCGGGTCCAGAAGGCGGGGTTAG  50

seq1  GCAGAATGAGGGAAAATTCCGCGGTTTAACCTTTCTTCTTGCATCTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATGAGGGAAAATTCCGCGGTTTAACCTTTCTTCTTGCATCTCTGC  100

seq1  TGCCTCATGGTCAGGAAGTCCTGGCGGGAGACTAGTGCCTAGTATTTGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCATGGTCAGGAAGTCCTGGCGGGAGACTAGTGCCTAGTATTTGCG  150

seq1  GTGCCTGAAAACTTTCTTAAGGAGCAGTTGTTTTGCTGGCCTCCTAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGAAAACTTTCTTAAGGAGCAGTTGTTTTGCTGGCCTCCTAGGAC  200

seq1  ATATTGGAGCTGGTCCTGTCATCTTCCAGGTCAGAGGAGCTGTTGGACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGAGCTGGTCCTGTCATCTTCCAGGTCAGAGGAGCTGTTGGACTG  250

seq1  GGAAACGGGCAGGAGCTTGGCAGGCCTGTGGAGCAGGGGTGCATTTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACGGGCAGGAGCTTGGCAGGCCTGTGGAGCAGGGGTGCATTTTCTG  300

seq1  CCGCCATTCTCACAATTCAGTGTTTGCGGACCGGAAAACTTCCTTAAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCATTCTCACAATTCAGTGTTTGCGGACCGGAAAACTTCCTTAAGCT  350

seq1  GCAGTTGCTCCTCCTAGGACACTGAGCAGCTGGTCCTGTCACCTTTCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTGCTCCTCCTAGGACACTGAGCAGCTGGTCCTGTCACCTTTCAGG  400

seq1  TCAGAGGAGCTGTTGGACTGGGGAACGGGCAGGAGCTGAGCAGGGGCGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGAGCTGTTGGACTGGGGAACGGGCAGGAGCTGAGCAGGGGCGTG  450

seq1  GAGCAGGGGTTCATTTTCTGCCGCAACTCTCATAATTCTGTTGTGGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGGGTTCATTTTCTGCCGCAACTCTCATAATTCTGTTGTGGATAT  500

seq1  CTTACCATTGTCAAGAAGTTTGAGATCCTGTGAATTGGGTTCATGATTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCATTGTCAAGAAGTTTGAGATCCTGTGAATTGGGTTCATGATTGG  550

seq1  TTTAATCAATTTTATGGTTGCCAGAATATTTTTCTAAAATATCCTCGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCAATTTTATGGTTGCCAGAATATTTTTCTAAAATATCCTCGGAG  600

seq1  ATCCTTGGCTGCATCTGGAGTTGGTATACCGGGAGGTTTGCCTTTGCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGGCTGCATCTGGAGTTGGTATACCGGGAGGTTTGCCTTTGCAAA  650

seq1  AGCCTTTATAAAACTCCTGTAATTCAAATTCGTTCATGCTTTCTTAACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTATAAAACTCCTGTAATTCAAATTCGTTCATGCTTTCTTAACTC  700

seq1  CCCTGTTCCTCCATTTGCCATTTAATTTCCCTTTCTCCAGGGAACTGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTCCTCCATTTGCCATTTAATTTCCCTTTCTCCAGGGAACTGAGT  750

seq1  AGGCATCCCGAGAGAGCTTTGTAAGTATTTGTCATATAGGGACCAGTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCCCGAGAGAGCTTTGTAAGTATTTGTCATATAGGGACCAGTGCA  800

seq1  GATTTGATTGAATTCGAAAATATTCGTTATAAAGTATCTTTGAAAGACCC  850
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GATTTGATTGAATTCG-AAATATTCGTTATAAAGTATCTTTGAAAGACCC  849

seq1  AAAACGTGAGGACTCTCCCACGTTCTGACTCAGGAGAGGAGACATTCCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACGTGAGGACTCTCCCACGTTCTGACTCAGGAGAGGAGACATTCCAA  899

seq1  ATCACTTGCAAGAAAGGGTCTTGATGCAAATTGTAAGAGGACTTTTATTT  950
      |||||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  ATCACTTGCAAGAAAGGGTCTTGATGCAAATTGT-AGAGGAC-TTTATTT  947

seq1  CAAGAGAACTCTCAGGTCCACATTCATATACCATGCAGGGCTAGAGGACT  1000
      | |||||||||||| |||||||||||||||||||||||||||||||||||
seq2  C-AGAGAACTCTCA-GTCCACATTCATATACCATGCAGGGCTAGAGGACT  995

seq1  GTGGTGTGCAGAGTAGCTGGGTAAGGGGGTATTTAAAGGAAGAAACCATA  1050
      |||||||||| ||||||||||||||||||||||  |||||||||||| | 
seq2  GTGGTGTGCA-AGTAGCTGGGTAAGGGGGTATT--AAGGAAGAAACC-TT  1041

seq1  AGTCAAGGGGATGGGG  1066
      |||| |||||||||||
seq2  AGTCCAGGGGATGGGG  1057