BAC Information

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BAC

Clone NameB6Ng01-031K07
Chromosome4 (Build37)
Map Location 18,624,631 - 18,625,646
singlet/doubletsinglet
Overlap genenone
Upstream geneMmp16
Downstream geneLOC667251, LOC435772, Cngb3, LOC623122, Cpne3, LOC100040306, 2410005O16Rik, Wwp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031K07.bB6Ng01-031K07.g
ACCDH861198DH861199
length1,2301,025
definitionDH861198|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K07, 5' end.DH861199|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcaatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctgattttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatctattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctttctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccgccagaagttcttt
tatccttgaaaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagttttatcatac
agatctttcacttccttagttagagtcacgccaagatatttatattattt
gtgactatgagaaggtgttgtttccctaatttctttctcagcctgtttat
tcttttgtttagagaaggcaatgacttgttgagttattttttatcagcta
cttcacgagctttttcaggtttaggagtctctgtagaatttaaggtcact
taataactatccatatcatctggaaagttatttggcttcctttcatttga
acccttgactcttgttggccatgctggtaaacttcagacagtgatagagg
tatatgggactcgtcgaccgtatgtgaggt
gaattctgtggaaaaaaacacaaacatactctctttctcatattaaatac
ctgattatgatcattccatataccaataagtggatcctttcatcccacct
aggcatgagtatgcctagttgtaggattctataggcactcagcaaggagt
tatttagcatccaaattttaaaatttttaaaataaaaaggatgatttaaa
taatatagaagggaatataattccacccttttttgatttttaagaagata
ttgttttaaagttccaaaataccttttccttgagaattacaaaaaaaaaa
aaaaaaatcctagtaaatgggtgacattaatttgtgacaaaacatctcaa
atgtttgactgtaatagccagttccattatatgttttaatctgatttgga
acaccaagcataaaaaattaacataagcaatgaccaattacatttttagt
tgtttctcttgttagaacagttgcaactagaaagcctaaaaatgtatcaa
tagtcacatgttcatattttattttatatatcagttgcagacagatatat
atcagggttaaagaccccttcagccttcagctccttgggtactttctcta
gctgctccattgggggccctgtgttccatccaatagctgactgaaagcat
tcacttctgtgtttgccaggcactggaatacccccacaagagacagctat
atcagtgtcctttcagcaaaatcttgctgtcatatgcaatagtgtctgcc
ttcggtggctgattatggggatggatccccaggtacagcagtctctgtgt
ggttcatctttcgtcacagctccaaactttggactctgtaaatccttcca
tgggagttttgttcccaattctagaaggggtaaagtgtccacactttggt
cttcgctcttctgagttcatgtgtttgcaaattgtatctggtattacaat
agagcatctttgggtatatgtcagagtgtattgctgatttctgtagtact
atgtccatttgagacctccagactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_18624631_18625646
seq2: B6Ng01-031K07.g_93_1089

seq1  CTCTCTTTCTCATATTAAATACCTGATTATGATCATTCCATATACCAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTCTCATATTAAATACCTGATTATGATCATTCCATATACCAATA  50

seq1  AGTGGATCCTTTCATCCCACCTAGGCATGAGTATGCCTAGTTGTAGGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATCCTTTCATCCCACCTAGGCATGAGTATGCCTAGTTGTAGGATT  100

seq1  CTATAGGCACTCAGCAAGGAGTTATTTAGCATCCAAATTTTAAAATTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGGCACTCAGCAAGGAGTTATTTAGCATCCAAATTTTAAAATTTTT  150

seq1  AAAATAAAAAGGATGATTTAAATAATATAGAAGGGAATATAATTCCACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAAGGATGATTTAAATAATATAGAAGGGAATATAATTCCACCC  200

seq1  TTTTTTGATTTTTAAGAAGATATTGTTTTAAAGTTCCAAAATACCTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGATTTTTAAGAAGATATTGTTTTAAAGTTCCAAAATACCTTTTC  250

seq1  CTTGAGAATTACAAAAAAAAAAAAAAAAATCCTAGTAAATGGGTGACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAATTACAAAAAAAAAAAAAAAAATCCTAGTAAATGGGTGACATT  300

seq1  AATTTGTGACAAAACATCTCAAATGTTTGACTGTAATAGCCAGTTCCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTGACAAAACATCTCAAATGTTTGACTGTAATAGCCAGTTCCATT  350

seq1  ATATGTTTTAATCTGATTTGGAACACCAAGCATAAAAAATTAACATAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTTTAATCTGATTTGGAACACCAAGCATAAAAAATTAACATAAGC  400

seq1  AATGACCAATTACATTTTTAGTTGTTTCTCTTGTTAGAACAGTTGCAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCAATTACATTTTTAGTTGTTTCTCTTGTTAGAACAGTTGCAACT  450

seq1  AGAAAGCCTAAAAATGTATCAATAGTCACATGTTCATATTTTATTTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCCTAAAAATGTATCAATAGTCACATGTTCATATTTTATTTTATA  500

seq1  TATCAGTTGCAGACAGATATATATCAGGGTTAAAGACCCCTTCAGCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTTGCAGACAGATATATATCAGGGTTAAAGACCCCTTCAGCCTTC  550

seq1  AGCTCCTTGGGTACTTTCTCTAGCTGCTCCATTGGGGGCCCTGTGTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTGGGTACTTTCTCTAGCTGCTCCATTGGGGGCCCTGTGTTCCA  600

seq1  TCCAATAGCTGACTGAAAGCATTCACTTCTGTGTTTGCCAGGCACTGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATAGCTGACTGAAAGCATTCACTTCTGTGTTTGCCAGGCACTGGAA  650

seq1  TACCCCCACAAGAGACAGCTATATCAGTGTCCTTTCAGCAAAATCTTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCCACAAGAGACAGCTATATCAGTGTCCTTTCAGCAAAATCTTGCT  700

seq1  GTCATATGCAATAGTGTCTGCCTTCGGTGGCTGATTAT-GGGATGGATCC  749
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTCATATGCAATAGTGTCTGCCTTCGGTGGCTGATTATGGGGATGGATCC  750

seq1  CCAGGTACAGCAGTCTCTGTGTGGTTCATCTTTCGTCACAGCTCCAAACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTACAGCAGTCTCTGTGTGGTTCATCTTTCGTCACAGCTCCAAACT  800

seq1  TTGGACTCTGTAAATCCTTCCATGGGAGTTTTGTTCCCAATTCTAAGAAG  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTGGACTCTGTAAATCCTTCCATGGGAGTTTTGTTCCCAATTCT-AGAAG  849

seq1  GGGTAAAGTGTCCACACTTTGGTCTTCGCTCTTCTTGAGTTTCATGTGTT  899
      |||||||||||||||||||||||||||||||||| |||| |||||||| |
seq2  GGGTAAAGTGTCCACACTTTGGTCTTCGCTCTTC-TGAG-TTCATGTG-T  896

seq1  TTGCAAATTGTATCTTGGGTATTACAAATTAGAGCATCTTCTGGGTATAT  949
      |||||||||||||||  ||||||||||  ||||||||||| |||||||||
seq2  TTGCAAATTGTATCT--GGTATTACAA--TAGAGCATCTT-TGGGTATAT  941

seq1  GTCAGAAGTGGTATTGCTGGATTTTCTGGTAGTACTATGTCCAATTTTTG  999
      ||||| ||| |||||||||   ||||| |||||||||||||||    || 
seq2  GTCAG-AGT-GTATTGCTG--ATTTCT-GTAGTACTATGTCCA----TTT  982

seq1  GAGGAACCTCCAGACTG  1016
      |||  ||||||||||||
seq2  GAG--ACCTCCAGACTG  997