BAC Information

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BAC

Clone NameB6Ng01-032M08
Chromosome4 (Build37)
Map Location 81,969,938 - 82,138,453
singlet/doubletdoublet
Overlap geneNfib
Upstream geneMpdz, LOC100040131, LOC100040144, EG668895, LOC100040164, EG545641
Downstream geneZdhhc21, Cer1, Frem1, LOC667985, 1810054D07Rik, Snapc3, Psip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032M08.bB6Ng01-032M08.g
ACCDH862008DH862009
length1,158867
definitionDH862008|Mus musculus domesticus DNA, BAC clone: B6Ng01-032M08, 5' end.DH862009|Mus musculus domesticus DNA, BAC clone: B6Ng01-032M08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,969,938 - 81,971,122)(82,137,587 - 82,138,453)
sequence
gaattccttactgaattctctgcagtaagaacccagcaatccaacgttct
gctcctccttctcggtttccctcttggtacaatgttctcctactgaacga
tggacaataagggacacaagaacgtcaagaaataggaaacatgtccaaca
ctatgtagtttccatcacgtacagtcatttcctatgcatgtaaaaattcc
agcttcctctctcttgcacacaggtattacaggacatatatttcaggtaa
tttagactccaaggtgtccagtctactttcaatgatttgctgatgcaagc
aaacagaatgaaatttaaagcatctaagatttcagttgcaaactcagtta
taaaatgtgaaagtaagtcaggcattatgcttcagaataaaatatcctca
aaggaatgtctctgatgtcccaaagtggacacaaggagcatcgaatgcac
actgccctttgtggctcactttgctgggcacgaagagttacatagacatt
ggtgggaattaatgaagaaaatgctctctccagtttcacaatttaaatac
atgattacttgaattttaaccactcaataatttttttttggtaggagaca
aaaacattgattttgggtacattagaaagcctggaatatattattccagg
tagagagtgccagtgttatttatactcacacttcactgcatggtctttct
aacaatttcctggcgcgtattctccccaagtgtatgttctttataatccc
aactttgcaaaataaagaaatcaacgaaacacgacatgtctaaatatcaa
cataaacaccataactgactatttctttagagaaagatagataatagcgc
ttgaatatattgacttagaggtatggattgagtttgggcaggttacagag
gggttacttcttcctttttattttaaaattaactctgaatatcctgacat
tcatcatgggcactcttagtattaacttatgtgggaaataactgagtttt
tcttgtgaacctatgggaaattatatctgtcaaaatattccactgaatag
catgactttctaactaaattggtgcagcactaatggaattatctccgatg
gcgtgggaggagatagcactccttgctaagatcgaatcgacttgcctgaa
aagcagca
gaattccgtagtgacagagagggtggttgggtattacaggggccagcacc
ctgttcaacacagtgacatatgtgagcctgcagacctccagtgtgcataa
gtgcatccaaatggagaagtatagatttatggaggattcaataggatttt
aaagtacacatagatgtttctaccctaaatttggaatttgagtacaaatt
accaaaaggaaatgaaagatttaatatccattgactttccttagttttaa
tctgatactccagtttgaatacagtctaagatactcaacttagtagggtc
tttattctcatgagccttgattctgctaagttaacatgaaaaagttctac
tgtttgttttgtgacattcttcttgctgtctccgctgaacagttagaata
cagcacctgaagatgaaggtgtttatttctgagtctgaatctacagtcta
cagtcctagtagctgagatactttagttttcatttttgttatcacaatgg
cctacaggacatctaaacttatcttcaaaggagtaattactgccatgttt
ggaggagactggtgaggaatggaaacagcacacaaggctcgcactaaaac
tgattggtactaaagagctgcaaatgatgccacagaacaaggccagtctc
ctttaggaaagtaccttctagtaaagtttcttttagtttagggaagaata
gcatttttatagtgcagcggtattgggaatcgaactcatgaccctctggg
agtttgtcagcccacatgctgtggcagagtagccagtgttactctcaaag
taagtgtttcagcttttctctttcaaggaagaatcaagggccccatggtt
agggattgaaaacgcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_81969938_81971122
seq2: B6Ng01-032M08.b_46_1203

seq1  GAATTCCTTACTGAATTCTCTGCAGTAAGAACCCAGCAATCCAACGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTACTGAATTCTCTGCAGTAAGAACCCAGCAATCCAACGTTCT  50

seq1  GCTCCTCCTTCTCGGTTTCCCTCTTGGTACAATGTTCTCCTACTGAACGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCCTTCTCGGTTTCCCTCTTGGTACAATGTTCTCCTACTGAACGA  100

seq1  TGGACAATAAGGGACACAAGAACGTCAAGAAATAGGAAACATGTCCAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAATAAGGGACACAAGAACGTCAAGAAATAGGAAACATGTCCAACA  150

seq1  CTATGTAGTTTCCATCACGTACAGTCATTTCCTATGCATGTAAAAATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTAGTTTCCATCACGTACAGTCATTTCCTATGCATGTAAAAATTCC  200

seq1  AGCTTCCTCTCTCTTGCACACAGGTATTACAGGACATATATTTCAGGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCTCTCTCTTGCACACAGGTATTACAGGACATATATTTCAGGTAA  250

seq1  TTTAGACTCCAAGGTGTCCAGTCTACTTTCAATGATTTGCTGATGCAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACTCCAAGGTGTCCAGTCTACTTTCAATGATTTGCTGATGCAAGC  300

seq1  AAACAGAATGAAATTTAAAGCATCTAAGATTTCAGTTGCAAACTCAGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAATGAAATTTAAAGCATCTAAGATTTCAGTTGCAAACTCAGTTA  350

seq1  TAAAATGTGAAAGTAAGTCAGGCATTATGCTTCAGAATAAAATATCCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTGAAAGTAAGTCAGGCATTATGCTTCAGAATAAAATATCCTCA  400

seq1  AAGGAATGTCTCTGATGTCCCAAAGTGGACACAAGGAGCATCGAATGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATGTCTCTGATGTCCCAAAGTGGACACAAGGAGCATCGAATGCAC  450

seq1  ACTGCCCTTTGTGGCTCACTTTGCTGGGCACGAAGAGTTACATAGACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCTTTGTGGCTCACTTTGCTGGGCACGAAGAGTTACATAGACATT  500

seq1  GGTGGGAATTAATGAAGAAAATGCTCTCTCCAGTTTCACAATTTAAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAATTAATGAAGAAAATGCTCTCTCCAGTTTCACAATTTAAATAC  550

seq1  ATGATTACTTGAATTTTAACCACTCAATAATTTTTTTTTGGTAGGAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTACTTGAATTTTAACCACTCAATAATTTTTTTTTGGTAGGAGACA  600

seq1  AAAACATTGATTTTGGGTACATTAGAAAGCCTGGAATATATTATTCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTGATTTTGGGTACATTAGAAAGCCTGGAATATATTATTCCAGG  650

seq1  TAGAGAGTGCCAGTGTTATTTATACTCACACTTCACTGCATGGTCTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGTGCCAGTGTTATTTATACTCACACTTCACTGCATGGTCTTTCT  700

seq1  AACAATTTCCTGGCGCGTATTCTCCCCAAGTGTATGTTCTTTATAATCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTTCCTGGCGCGTATTCTCCCCAAGTGTATGTTCTTTATAATCCC  750

seq1  AACTTTGCAAAATAAAGAAATCAACGAAACACGACATGTCTAAATATCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGCAAAATAAAGAAATCAACGAAACACGACATGTCTAAATATCAA  800

seq1  CATAAACACCATAACTGACTATTTCTTTAGAGAAAGATAGATAATAGCGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACACCATAACTGACTATTTCTTTAGAGAAAGATAGATAATAGCGC  850

seq1  TTGAATATATTGACTTAGAGGTATGGATTGAGTTTGGGCAGGTTACAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATATTGACTTAGAGGTATGGATTGAGTTTGGGCAGGTTACAGAG  900

seq1  GGGTTACTTCTTCCTTTTTATTTTTAAAAATTAACTCTGAATATCCTGAC  950
      ||||||||||||||||||||||||  ||||||||||||||||||||||||
seq2  GGGTTACTTCTTCCTTTTTATTTT--AAAATTAACTCTGAATATCCTGAC  948

seq1  AATTCATCATGGGCACTCTTAAGTATTTAACTTTATGTTGGGAAAATAAA  1000
       ||||||||||||||||||| |||| ||||| ||||| |||||||   ||
seq2  -ATTCATCATGGGCACTCTT-AGTA-TTAAC-TTATG-TGGGAAA--TAA  991

seq1  CTGGAGTTTTTCTCTGTGGAAACCTATGGGAGAATTATATCTTGTTCAAA  1050
      || |||||||||| ||||  ||||||||||| ||||||||||   |||||
seq2  CT-GAGTTTTTCT-TGTG--AACCTATGGGA-AATTATATCT--GTCAAA  1034

seq1  ATATTCCACTGAATAGCATGACTGTCTAACTATAATTGGTGCAGCACTAA  1100
      ||||||||||||||||||||||| |||||||| |||||||||||||||||
seq2  ATATTCCACTGAATAGCATGACTTTCTAACTA-AATTGGTGCAGCACTAA  1083

seq1  TGGAATTAATCTCCAGATGGCTGTTGGGAGGAGAAGGCATCTCCTTGCGT  1150
      ||||||| |||||| ||||||   ||||||||||  ||| |||||||| |
seq2  TGGAATT-ATCTCC-GATGGC--GTGGGAGGAGATAGCA-CTCCTTGC-T  1127

seq1  AAGAGTCCAGATCAGCATGGCCCTGAAAAGCAGCA  1185
      |||| || | |||  | ||  ||||||||||||||
seq2  AAGA-TCGA-ATCGACTTG--CCTGAAAAGCAGCA  1158

seq1: chr4_82137587_82138453
seq2: B6Ng01-032M08.g_68_934 (reverse)

seq1  GTGCGTTTTCAATCCCATAACCATGGGGCCTTGGATTCTTCCTTGGAAGA  50
      |||||||||||||||| ||||||||||||| | |||||||||||| ||||
seq2  GTGCGTTTTCAATCCC-TAACCATGGGGCCCTTGATTCTTCCTTGAAAGA  49

seq1  GAAAAGCTGAAACACTTACTTTGAGAGTTACACTGGCTACTCTGCCACAG  100
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAAAAGCTGAAACACTTACTTTGAGAGTAACACTGGCTACTCTGCCACAG  99

seq1  CATGTGGGCTGACAAACTCCCAGAGGGTCATGAGTTCGATTCCCATTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CATGTGGGCTGACAAACTCCCAGAGGGTCATGAGTTCGATTCCCAATACC  149

seq1  GCTGCACTAT-AAAATGCTATTCTTCCCTAAACTAAAAGAAACTTTACTA  199
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCTGCACTATAAAAATGCTATTCTTCCCTAAACTAAAAGAAACTTTACTA  199

seq1  GAAGGTACTTTCCTAAAGGAGACTGGCCTTGTTCTGTGGCATCATTTGCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTACTTTCCTAAAGGAGACTGGCCTTGTTCTGTGGCATCATTTGCA  249

seq1  GCTCTTTAGTACCAATCAGTTTTAGTGCGAGCCTTGTGTGCTGTTTCCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTAGTACCAATCAGTTTTAGTGCGAGCCTTGTGTGCTGTTTCCAT  299

seq1  TCCTCACCAGTCTCCTCCAAACATGGCAGTAATTACTCCTTTGAAGATAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACCAGTCTCCTCCAAACATGGCAGTAATTACTCCTTTGAAGATAA  349

seq1  GTTTAGATGTCCTGTAGGCCATTGTGATAACAAAAATGAAAACTAAAGTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGATGTCCTGTAGGCCATTGTGATAACAAAAATGAAAACTAAAGTA  399

seq1  TCTCAGCTACTAGGACTGTAGACTGTAGATTCAGACTCAGAAATAAACAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTACTAGGACTGTAGACTGTAGATTCAGACTCAGAAATAAACAC  449

seq1  CTTCATCTTCAGGTGCTGTATTCTAACTGTTCAGCGGAGACAGCAAGAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCTTCAGGTGCTGTATTCTAACTGTTCAGCGGAGACAGCAAGAAG  499

seq1  AATGTCACAAAACAAACAGTAGAACTTTTTCATGTTAACTTAGCAGAATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCACAAAACAAACAGTAGAACTTTTTCATGTTAACTTAGCAGAATC  549

seq1  AAGGCTCATGAGAATAAAGACCCTACTAAGTTGAGTATCTTAGACTGTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCATGAGAATAAAGACCCTACTAAGTTGAGTATCTTAGACTGTAT  599

seq1  TCAAACTGGAGTATCAGATTAAAACTAAGGAAAGTCAATGGATATTAAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTGGAGTATCAGATTAAAACTAAGGAAAGTCAATGGATATTAAAT  649

seq1  CTTTCATTTCCTTTTGGTAATTTGTACTCAAATTCCAAATTTAGGGTAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATTTCCTTTTGGTAATTTGTACTCAAATTCCAAATTTAGGGTAGA  699

seq1  AACATCTATGTGTACTTTAAAATCCTATTGAATCCTCCATAAATCTATAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTATGTGTACTTTAAAATCCTATTGAATCCTCCATAAATCTATAC  749

seq1  TTCTCCATTTGGATGCACTTATGCACACTGGAGGTCTGCAGGCTCACATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATTTGGATGCACTTATGCACACTGGAGGTCTGCAGGCTCACATA  799

seq1  TGTCACTGTGTTGAACAGGGTGCTGGCCCCTGTAATACCCAACCACCCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTGTGTTGAACAGGGTGCTGGCCCCTGTAATACCCAACCACCCTC  849

seq1  TCTGTCACTACGGAATTC  867
      ||||||||||||||||||
seq2  TCTGTCACTACGGAATTC  867