BAC Information

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BAC

Clone NameB6Ng01-033A05
Chromosome4 (Build37)
Map Location 76,583,587 - 76,682,331
singlet/doubletdoublet
Overlap genenone
Upstream genePtprd, LOC667858, LOC667862
Downstream geneLOC100039974
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033A05.bB6Ng01-033A05.g
ACCDH862183DH862184
length573937
definitionDH862183|Mus musculus domesticus DNA, BAC clone: B6Ng01-033A05, 5' end.DH862184|Mus musculus domesticus DNA, BAC clone: B6Ng01-033A05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,681,765 - 76,682,331)(76,583,587 - 76,584,532)
sequence
attttaaggaaaagcttgttaccttgaccttacttttctaatttgtttct
aaccagggcctgttctgtatccttgcactaagcagtcatttctcactgat
ttaaatgtctagacaaatcaagactcttgatgcaaccattaatagcacac
tccataactttctgcctctaattaagcattgacacctcctgtatggcatc
aaaagagagtcctgcctcaagtatttagccatgtgggataaatacagaaa
gaaagggccactgtttcgtatcatgccggggcctagcaaacacagaagtg
gatgctcacagtcagctaatggatggatcacagggcccccaatggaggag
ctagagaaagtacccaaggagctaaagggatctgcaaccctataggtgga
acaacattatgaactaaccagtaccccggagctcttgactctagctgcat
atgtatcaaaagatggcctagtcggccatcactggaaagaaaggcccatt
ggacttgcaaactttatatgccccagtacaggggaacgccagggccaaaa
agggggagtgggtgggtagggga
gaattcagatgaattgtgtaatatacaaagccacttgtgatggttattgt
tatttgtcaaatttgcaagatctggaatcacctgcagagaaggttcactg
tacatctgtgagagatacttaactgtggggttgcctctgcatttctatct
agcctctggcatgcatgggatggattgtgttgataggttaactgagactg
gaagacccacatacaaggtcagagaaccctttcctgggctttgagttcta
tattgtataaaacggggaaaaattggaagcatcagaccgctctgcttcct
gtttgtgaatgaggtggccagccatttcctagacttctctgcaatgatgg
tctgtgttcttggacagtgaactgaagaaatccctttctcacttgttttt
cttagggtattttttttcacaaaaagaagaaaacaaactaagataatttc
ttatcagattacctgtattcaaaacttctaactcaacagtgcttagtcaa
aaaaaaaggggggggggcggggagagggcatgcttcccatcactttaaag
atgacatgctacactgaagaaaataatattcacttctctcaagctttaaa
tgaaaaacgtacttaattttcccaattgtaaatactgtacggtttgcttt
tatgtgactataaacaacttgatatccttggttaaaatttgaatcaaaag
ttcttgttaatattatcagtatgtaaatatctacatataagcaattgaat
atataggtgcacatatgcaaacatctcatgtgcaaataaatgaaaaaatg
ttcagcttcatttggtattggagaatcaagatggcaccctaataagtaat
tgacacactccataggatatgtttaagaaatcccataaatgaattctcat
tgatcatcaattgagtggtgtctataagcaaggcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_76681765_76682331
seq2: B6Ng01-033A05.b_56_622 (reverse)

seq1  TCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTG  50

seq1  GGGCATATAAAGTTTGCAAGTCCAATGGGCCTTTCTTTCCAGTGATGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATATAAAGTTTGCAAGTCCAATGGGCCTTTCTTTCCAGTGATGGCC  100

seq1  GACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGG  150

seq1  TACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTT  200

seq1  AGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCA  250

seq1  TCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCA  300

seq1  TGATACGAAACAGTGGCCCTTTCTTTCTGTATTTATCCCACATGGCTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACGAAACAGTGGCCCTTTCTTTCTGTATTTATCCCACATGGCTAAA  350

seq1  TACTTGAGGCAGGACTCTCTTTTGATGCCATACAGGAGGTGTCAATGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGAGGCAGGACTCTCTTTTGATGCCATACAGGAGGTGTCAATGCTT  400

seq1  AATTAGAGGCAGAAAGTTATGGAGTGTGCTATTAATGGTTGCATCAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAGGCAGAAAGTTATGGAGTGTGCTATTAATGGTTGCATCAAGAG  450

seq1  TCTTGATTTGTCTAGACATTTAAATCAGTGAGAAATGACTGCTTAGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATTTGTCTAGACATTTAAATCAGTGAGAAATGACTGCTTAGTGCA  500

seq1  AGGATACAGAACAGGCCCTGGTTAGAAACAAATTAGAAAAGTAAGGTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATACAGAACAGGCCCTGGTTAGAAACAAATTAGAAAAGTAAGGTCAA  550

seq1  GGTAACAAGCTTTTCCT  567
      |||||||||||||||||
seq2  GGTAACAAGCTTTTCCT  567

seq1: chr4_76583587_76584532
seq2: B6Ng01-033A05.g_70_1006

seq1  GAATTCAGATGAATTGTGTAATATACAAAGCCACTTGTGATGGTTATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATGAATTGTGTAATATACAAAGCCACTTGTGATGGTTATTGT  50

seq1  TATTTGTCAAATTTGCAAGATCTGGAATCACCTGCAGAGAAGGTTCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTCAAATTTGCAAGATCTGGAATCACCTGCAGAGAAGGTTCACTG  100

seq1  TACATCTGTGAGAGATACTTAACTGTGGGGTTGCCTCTGCATTTCTATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTGTGAGAGATACTTAACTGTGGGGTTGCCTCTGCATTTCTATCT  150

seq1  AGCCTCTGGCATGCATGGGATGGATTGTGTTGATAGGTTAACTGAGACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTGGCATGCATGGGATGGATTGTGTTGATAGGTTAACTGAGACTG  200

seq1  GAAGACCCACATACAAGGTCAGAGAACCCTTTCCTGGGCTTTGAGTTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCCACATACAAGGTCAGAGAACCCTTTCCTGGGCTTTGAGTTCTA  250

seq1  TATTGTATAAAACGGGGAAAAATTGGAAGCATCAGACCGCTCTGCTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTATAAAACGGGGAAAAATTGGAAGCATCAGACCGCTCTGCTTCCT  300

seq1  GTTTGTGAATGAGGTGGCCAGCCATTTCCTAGACTTCTCTGCAATGATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGAATGAGGTGGCCAGCCATTTCCTAGACTTCTCTGCAATGATGG  350

seq1  TCTGTGTTCTTGGACAGTGAACTGAAGAAATCCCTTTCTCACTTGTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTTCTTGGACAGTGAACTGAAGAAATCCCTTTCTCACTTGTTTTT  400

seq1  CTTAGGGTATTTTTTTTCACAAAAAGAAGAAAACAAACTAAGATAATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGGTATTTTTTTTCACAAAAAGAAGAAAACAAACTAAGATAATTTC  450

seq1  TTATCAGATTACCTGTATTCAAAACTTCTAACTCAACAGTGCTTAGTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGATTACCTGTATTCAAAACTTCTAACTCAACAGTGCTTAGTCAA  500

seq1  AAAAAAAGGGGGGGGGGCGGGGAGAGGGCATGCTTCCCATCACTTTAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGGGGGGGGGGCGGGGAGAGGGCATGCTTCCCATCACTTTAAAG  550

seq1  ATGACATGCTACACTGAAGAAAATAATATTCACTTCTCTCAAGCTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATGCTACACTGAAGAAAATAATATTCACTTCTCTCAAGCTTTAAA  600

seq1  TGAAAAACGTACTTAATTTTCCCAATTGTAAATACTGTACGGTTTGCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAACGTACTTAATTTTCCCAATTGTAAATACTGTACGGTTTGCTTT  650

seq1  TATGTGACTATAAACAACTTGATATCCTTGGTTAAAA-TTGAATCAAAAG  699
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TATGTGACTATAAACAACTTGATATCCTTGGTTAAAATTTGAATCAAAAG  700

seq1  TTCTTGTTAATATTATCAGTATGTAAATATCTACATATAAGCAATTGAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTTAATATTATCAGTATGTAAATATCTACATATAAGCAATTGAAT  750

seq1  ATATAGGTGCACATATGCAAACATCTCATGTGCAAATAAATGAAAAAAAT  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATATAGGTGCACATATGCAAACATCTCATGTGCAAATAAATG-AAAAAAT  799

seq1  GTTCAGCTTCATTTGGTATTGGAGAATCAAAGATGGCAACCATAATAAGT  849
      |||||||||||||||||||||||||||| |||||||| ||| ||||||||
seq2  GTTCAGCTTCATTTGGTATTGGAGAATC-AAGATGGC-ACCCTAATAAGT  847

seq1  AATTGACACACTCCAGTAGGATAATGTTTAAGAAATCCCAGAAATGAAAT  899
      ||||||||||||||| |||||| ||||||||||||||||| ||||| |||
seq2  AATTGACACACTCCA-TAGGAT-ATGTTTAAGAAATCCCATAAATG-AAT  894

seq1  TCTCATTGATCCATCAAATTGAGTGGTGTTCTACAAAGCAAGGCAAA  946
      |||||||||| |||| |||||||||||| ||||  ||||||||||||
seq2  TCTCATTGAT-CATC-AATTGAGTGGTG-TCTA-TAAGCAAGGCAAA  937