BAC Information

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BAC

Clone NameB6Ng01-033B15
Chromosome4 (Build37)
Map Location 111,831,514 - 111,831,970
singlet/doubletsinglet
Overlap gene9530098N22Rik
Upstream geneLOC100040381, 2310026E23Rik, Spata6, LOC621612, Slc5a9, LOC639774, C130057D23Rik, LOC639781
Downstream geneA430090E18Rik, A030013N09Rik, LOC665949, LOC630887, OTTMUSG00000008540, LOC100040581, A030001H23Rik, LOC433745, LOC545668
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033B15.bB6Ng01-033B15.g
ACCDH862248DH862249
length1,099451
definitionDH862248|Mus musculus domesticus DNA, BAC clone: B6Ng01-033B15, 5' end.DH862249|Mus musculus domesticus DNA, BAC clone: B6Ng01-033B15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttttaatagctgagtagtactccattgtgaaaatgtactaca
ttttctgtattctttcctctgttgagggacgtctgggttctttccagctt
ctggggtctataaataaggctgctatgaacatagtggagcatgtgtcctt
attacctgttggagcatcttctgggtatatgcccaggagtgatatagctg
ggtcctcaggtagtactatgtcctcttttctgaggaacaaccaaactgat
ttccagagtggttgtaccagctttcaatcccaccagcagtgcatttgctg
tcacctgcagctacctgactggtgtgaggtggaatctcagggttgttttg
atttgcacttccctgatagcaaaggatgttgaacatttctttaggtgctt
ctgagccattttatattcctcagttgaaaattctttgtttaacttcgtac
ctcatttttaatagggttatttggttctctggtgtctaacttcttgtgtt
ctttgtatatattggatattagtcctatttaggatgtaagattgttaaag
atcttttcccaatctgttggttgctgttttgtcctattgtcagtgtcctt
tgccttacagaagctttgtaattttaaaaggccccagaatacccaagata
caattcacaaaccaaatgaagctcatgaagaagcaagaccaaagtatgaa
taccctgggcctccttagaagggggaacaaaatacccacaggaggagata
cagagacaaaatgtggagcagagatggaaggaaagactatccagagactg
ccccacctggggatccatcctacatacattcactaaacccagacactgtt
gttgatgccatcaagttctagctgacaggagtctgatatagctgtctcct
ggggaggctctgacagtgactgacaaatacagaagtggatgctcttagct
aacattagctgagcacaaagtctccatggagagctaaggaaagatcaaag
gagctgaaggagcttgcagaccttgaaggaactacaatatgatcaaacag
taccgtcagagcttccagggactaaccacaacccaggtggtacactgga
aagaagtatcagagaatattatgtacctgacgatattgactttcattatt
taaaaaacaaaatgttgatgataactttggtgacatctctaactgaatac
ctattgccttaaattccctggctgaacaactatggaaaacagtgaacttt
tttctgcaagttttaaaaaactttctaaggaggattaaatcttgataatt
gagctgaaggggtttgcagccccataggagaacaacaatatgaactaaat
agtacctccagagatccctggaactaaaccaccaatcaaagaaaacacat
ggtgggacttgtgtctctatctgcatatgtagcagaggatggcctggttg
gctatcactgggaggagagacccttggtcttgcaaatattctatgcccca
atatatgggaatgccagggccaggaagcaggagtgggtgggttggggagc
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_111831514_111831970
seq2: B6Ng01-033B15.g_67_523 (reverse)

seq1  TGCTCCCCAACCCACCCACTCCTGCTTCCTGGCCCTGGCATTCCCATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCCAACCCACCCACTCCTGCTTCCTGGCCCTGGCATTCCCATATA  50

seq1  TTGGGGCATAGAATATTTGCAAGACCAAGGGTCTCTCCTCCCAGTGATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGCATAGAATATTTGCAAGACCAAGGGTCTCTCCTCCCAGTGATAG  100

seq1  CCAACCAGGCCATCCTCTGCTACATATGCAGATAGAGACACAAGTCCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAGGCCATCCTCTGCTACATATGCAGATAGAGACACAAGTCCCAC  150

seq1  CATGTGTTTTCTTTGATTGGTGGTTTAGTTCCAGGGATCTCTGGAGGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTTTTCTTTGATTGGTGGTTTAGTTCCAGGGATCTCTGGAGGTAC  200

seq1  TATTTAGTTCATATTGTTGTTCTCCTATGGGGCTGCAAACCCCTTCAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGTTCATATTGTTGTTCTCCTATGGGGCTGCAAACCCCTTCAGCT  250

seq1  CAATTATCAAGATTTAATCCTCCTTAGAAAGTTTTTTAAAACTTGCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATCAAGATTTAATCCTCCTTAGAAAGTTTTTTAAAACTTGCAGAA  300

seq1  AAAAGTTCACTGTTTTCCATAGTTGTTCAGCCAGGGAATTTAAGGCAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCACTGTTTTCCATAGTTGTTCAGCCAGGGAATTTAAGGCAATA  350

seq1  GGTATTCAGTTAGAGATGTCACCAAAGTTATCATCAACATTTTGTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCAGTTAGAGATGTCACCAAAGTTATCATCAACATTTTGTTTTTT  400

seq1  AAATAATGAAAGTCAATATCGTCAGGTACATAATATTCTCTGATACTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGAAAGTCAATATCGTCAGGTACATAATATTCTCTGATACTTCT  450

seq1  TGAATTC  457
      |||||||
seq2  TGAATTC  457