BAC Information

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BAC

Clone NameB6Ng01-033E04
Chromosome4 (Build37)10 (Build37)
Map Location 16,225,643 - 16,225,899104,053,903 - 104,054,363
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150
Downstream geneLOC383994, LOC100040154, LOC667212, LOC100040173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033E04.bB6Ng01-033E04.g
ACCDH862364DH862365
length257956
definitionDH862364|Mus musculus domesticus DNA, BAC clone: B6Ng01-033E04, 5' end.DH862365|Mus musculus domesticus DNA, BAC clone: B6Ng01-033E04, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(16,225,643 - 16,225,899)(104,053,903 - 104,054,363)
sequence
aactctggtaaaagctgtatgatcatttggttaaaaaaaaaatctaagtt
tttgtaaggtttcaaaattcattgtctttgttttaaagcacatagttggc
tgagcgttggctgagctgtttaggcaggggaagggtggagtgtgttggtg
gtgactaactgcttcagttgtgtgttttcatccctggtgctcttcctcgt
gtggttgctcttgctgtttgcctccttggttactttgtcctttttatatt
tttgttt
gaattctcacctgaggaatacagaaatggcagagaagcacctgaaaaaat
gttcaacatccttaatcagcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcataccagtcagaatggctaagatcaaaaattcaggtgacag
catatgctggtgaggatgtggagaaagaggaacactcctccattgttggt
gggattacaagcttatacaaccactctggaaatcagtctggcagttcctc
agaaaattggacaaagtactactggaggatcccgcaatacctctcctggg
catatatccaaaagatgtcccaaccattaagtaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaaaaaaccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcataggca
actggatggacctgaagggcatcatcctgagtgaagtaaaccaatcacga
aggaactcacacaatatgtacttactgataagtgtatattagccaagaaa
cttaggatacccaagatataagatacaatttgctaaactcatgaaactca
agaagaacgaagaccaaagtgtggacaatttagccccttcttagaaatgg
gaacaaaacacccatggaaggagttacagagacaaaatttggagttgtga
caaaaggatggaccatccagtgattgccatatctagggatccatcccata
atcagcttccaaacgctgacaccattgcatacactagcaagattttgctg
aaaggacccatatatagatgtctctttgaactatgccgggccctagcaaa
tacagaaatggatgctcacagtcatctgtgatggatcctagggcttccat
ggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16225643_16225899
seq2: B6Ng01-033E04.b_53_309

seq1  AACTCTGGTAAAAGCTGTATGATCATTTGGTTAAAAAAAAAATCTAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGTAAAAGCTGTATGATCATTTGGTTAAAAAAAAAATCTAAGTT  50

seq1  TTTGTAAGGTTTCAAAATTCATTGTCTTTGTTTTAAAGCACATAGTTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAGGTTTCAAAATTCATTGTCTTTGTTTTAAAGCACATAGTTGGC  100

seq1  TGAGCGTTGGCTGAGCTGTTTAGGCAGGGGAAGGGTGGAGTGTGTTGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCGTTGGCTGAGCTGTTTAGGCAGGGGAAGGGTGGAGTGTGTTGGTG  150

seq1  GTGACTAACTGCTTCAGTTGTGTGTTTTCAGCCCTGGTGCTCTTCCTCGT  200
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTGACTAACTGCTTCAGTTGTGTGTTTTCATCCCTGGTGCTCTTCCTCGT  200

seq1  GTGGTTGCTCTTGCTGTTTGCCTCCTTGGTTACTTTGTCCTTTTTATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGCTCTTGCTGTTTGCCTCCTTGGTTACTTTGTCCTTTTTATATT  250

seq1  TTTGTTT  257
      |||||||
seq2  TTTGTTT  257

seq1: chr10_104053903_104054363
seq2: B6Ng01-033E04.g_66_537 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          ||||||||||||||||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || |||||||||||||||||||||||| || ||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGTTTTTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| ||||||||||||||||||| ||||  |||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTACTTAATGGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||| |||||| ||||||||||||||| ||||||||||| ||||||||| 
seq2  TGGGACATCTTTTGGATATATGCCCAGGAGAGGTATTGCGGGATCCTCCA  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||| ||||||||||||||| |||| ||||||| ||||||||||||
seq2  GTAGTACTTTGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||| |||| || ||||||||||||||||||||||||||||||||||
seq2  GGTTGTATAAGCTTGTAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||| ||||||| ||||||||||||||||||||||||||||||
seq2  TCCACATCCTCACCAGCATATGCTGTCACCTGAATTTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTGGTATGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCA-TTC  439
      ||| |||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTGCTGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTTC  450

seq1  GGTATTCCTCAGGTGAGAATTC  461
       |||||||||||||||||||||
seq2  TGTATTCCTCAGGTGAGAATTC  472