BAC Information

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BAC

Clone NameB6Ng01-035G24
Chromosome4 (Build37)
Map Location 76,355,142 - 76,467,315
singlet/doubletdoublet
Overlap geneLOC667858
Upstream geneLOC100039884, LOC667845, Ptprd
Downstream geneLOC667862
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035G24.bB6Ng01-035G24.g
ACCDH863899DH863900
length9921,026
definitionDH863899|Mus musculus domesticus DNA, BAC clone: B6Ng01-035G24, 5' end.DH863900|Mus musculus domesticus DNA, BAC clone: B6Ng01-035G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,355,142 - 76,356,147)(76,466,294 - 76,467,315)
sequence
gaattctcagcctccaaaaactcatcaaacgctgaatagagaatgatttt
ctgtggcactgagttcatgttcacgataaggagaaacaaatggcaaagca
ctagggactcaagtttgtcacttccaacttgattctttggtctctaatta
gtatattttagtcatagtaaatttagattaaaatttcctcacttcttcat
tgtaaggcattagcatcattcctacataaattaatgaaaaagttatacaa
ttttatagaattaaaccttgagcagttatctaaattcttttgcacaaatg
tgaataagttgaaatactaaaggggacagcaacaacatgatcactagtta
gaattcggggttaacaacatgattagaaggaaaaacaccaaggaattgaa
taatcagggaaattaagaaaaaatcatacaaaactagtattctttggtaa
aataattagtctaagagtaagggagtttacagttttagttcctctaacag
aagtctgagatgttctgaattgtcagaactacctgtcttccctaaaaata
atttcttgaaaaagaagactacatatcaatctttatggccctattctata
tgaggagtgatatattacattagaagagaaaatgggattgtagaagtaat
tttagaagtaaaataagccattattttggaataggagctgggcatttcta
attctgaagtaactgcatgggattgcttttcaggtttggctcttgaaagg
ggaattattcttttctctgacttgctcccaggaaaaacaggatccccact
agcaaggcactgagagggaaggttttattcctgttaaggttaggctttaa
gttaaagatattagcttttcaaaaccactcccaaagccaattactggttt
ccctgttcaaatggatttttggcaatgggaccccgaagggttcccagtgg
gggggagtacggggcaagaaggcaattgctatgaagaggaat
gaattcagaagttgacataggagatccatggcaagcaaaattggttgtaa
cattgttttcttaaagaaaatttaaacaaatagaatgattacatagtagg
ttaagttttaggtgacttcagggtgtattataaacttttctgtgtggtct
agagatttgtgtaagatgtacgaggtatttttttaaatctattgtcagtg
attgcattacttggggtacagtaataatctagagataatataaagtgttt
aggagaatatcaattacatacaagccctattatagtctgtaatagttcaa
gagtttagttatccaagatgtcctggatgaagttacccatggataccaac
aaataattgtattgttattatttaaatattatttgattttttaatataca
aggatgattttctttttattggttattttatttatgtatatttcaaatgt
tattccccttcccaatttcctttccacaatccccctatccctcccccctc
tgcctctatgaggggtgctcaaggtagattttcaagaagctgaaagaaat
tttcaaaaaatgtatagtttataaaagacttgcatttcaagtctttaaaa
aattctatttatctaaaatataatgcctccgggcactagtaatccttgat
aaaaaatgttgtatcgatgttcatccaatatgaatttccttctccagtct
catttgcattccctatttccccaaaattgtaaaaacacctcctttggcct
tcttggaagggcttttcttaccttccaacaagaacaagtcaaacagcatc
attctttgcagtcgttgaaattattttggctaactgagcactatttgtta
agaaatttgttttcgtgatgttcaattttatataaacataaaccagtatt
taccaaccattacgtaacaaagatgtatgcatttcttctcccattctgac
aaacaccagaatattgcatgacctggagttcgcccccagatgccatgcca
tggctttgaatctgggtgaaagatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_76355142_76356147
seq2: B6Ng01-035G24.b_45_1036

seq1  GAATTCTCAGCCTCCAAAAACTCATCAAACGCTGAATAGAGAATGATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCCTCCAAAAACTCATCAAACGCTGAATAGAGAATGATTTT  50

seq1  CTGTGGCACTGAGTTCATGTTCACGATAAGGAGAAACAAATGGCAAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCACTGAGTTCATGTTCACGATAAGGAGAAACAAATGGCAAAGCA  100

seq1  CTAGGGACTCAAGTTTGTCACTTCCAACTTGATTCTTTGGTCTCTAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGACTCAAGTTTGTCACTTCCAACTTGATTCTTTGGTCTCTAATTA  150

seq1  GTATATTTTAGTCATAGTAAATTTAGATTAAAATTTCCTCACTTCTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTTTAGTCATAGTAAATTTAGATTAAAATTTCCTCACTTCTTCAT  200

seq1  TGTAAGGCATTAGCATCATTCCTACATAAATTAATGAAAAAGTTATACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGGCATTAGCATCATTCCTACATAAATTAATGAAAAAGTTATACAA  250

seq1  TTTTATAGAATTAAACCTTGAGCAGTTATCTAAATTCTTTTGCACAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAGAATTAAACCTTGAGCAGTTATCTAAATTCTTTTGCACAAATG  300

seq1  TGAATAAGTTGAAATACTAAAGGGGACAGCAACAACATGATCACTAGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAGTTGAAATACTAAAGGGGACAGCAACAACATGATCACTAGTTA  350

seq1  GAATTCGGGGTTAACAACATGATTAGAAGGAAAAACACCAAGGAATTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCGGGGTTAACAACATGATTAGAAGGAAAAACACCAAGGAATTGAA  400

seq1  TAATCAGGGAAATTAAGAAAAAATCATACAAAACTAGTATTCTTTGGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGGGAAATTAAGAAAAAATCATACAAAACTAGTATTCTTTGGTAA  450

seq1  AATAATTAGTCTAAGAGTAAGGGAGTTTACAGTTTTAGTTCCTCTAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTAGTCTAAGAGTAAGGGAGTTTACAGTTTTAGTTCCTCTAACAG  500

seq1  AAGTCTGAGATGTTCTGAATTGTCAGAACTACCTGTCTTCCCTAAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGAGATGTTCTGAATTGTCAGAACTACCTGTCTTCCCTAAAAATA  550

seq1  ATTTCTTGAAAAAGAAGACTACATATCAATCTTTATGGCCCTATTCTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTGAAAAAGAAGACTACATATCAATCTTTATGGCCCTATTCTATA  600

seq1  TGAGGAGTGATATATTACATTAGAAGAGAAAATGGGATTGTAGAAGTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGTGATATATTACATTAGAAGAGAAAATGGGATTGTAGAAGTAAT  650

seq1  TTTAGAAGTAAAATAAGCAATAATTTTGGAATAGGAGCTGTGCATTTCTA  700
      |||||||||||||||||| || |||||||||||||||||| |||||||||
seq2  TTTAGAAGTAAAATAAGCCATTATTTTGGAATAGGAGCTGGGCATTTCTA  700

seq1  ATTCTGATGTAACTGCATGTGATTGCTTTTCAGGTTTGTCTCTTGAGAGG  750
      ||||||| ||||||||||| |||||||||||||||||| ||||||| |||
seq2  ATTCTGAAGTAACTGCATGGGATTGCTTTTCAGGTTTGGCTCTTGAAAGG  750

seq1  GGATTTATTC-TTTCTCTGACTTGCT-CCAGGATAAACAGGATCCCCACT  798
      ||| |||||| ||||||||||||||| |||||| ||||||||||||||||
seq2  GGAATTATTCTTTTCTCTGACTTGCTCCCAGGAAAAACAGGATCCCCACT  800

seq1  AGCAGGGCACTGAGA-GGAAGGTTATATTTTCTTGTTTATGTTAGGTCTT  847
      |||| |||||||||| |||||||| ||  ||| |||| | |||||| |||
seq2  AGCAAGGCACTGAGAGGGAAGGTTTTA--TTCCTGTTAAGGTTAGG-CTT  847

seq1  TAAGTATAAAG-TATTAGCTTTTCAACAAACAACCTCAAAAGCCCAATTA  896
      ||||| ||||| |||||||||||||  |||| ||  | |||| |||||||
seq2  TAAGT-TAAAGATATTAGCTTTTCA--AAACCACTCCCAAAG-CCAATTA  893

seq1  CATGATTTCACTTGTTCAAAATGTAATTTATTGCTAATGGAACCACAGAA  946
      | || |||| | ||||| ||||| |  || |||  ||||| ||| | |||
seq2  C-TGGTTTC-CCTGTTC-AAATGGA--TTTTTGGCAATGGGACC-CCGAA  937

seq1  GTGTTTCCACAGTGTGTGGAGTACGGTGGCAAGTAAGGCAAATTGCTATT  996
      | ||| |||  | | | ||||||||| |||||| ||||| |||||||| |
seq2  GGGTTCCCAGTG-GGGGGGAGTACGG-GGCAAG-AAGGC-AATTGCTA-T  982

seq1  GAAGAGGAAT  1006
      ||||||||||
seq2  GAAGAGGAAT  992

seq1: chr4_76466294_76467315
seq2: B6Ng01-035G24.g_69_1094 (reverse)

seq1  GCATCTTTCACCCCAGACTCAAAGCCCATGGCATGGCATCTGTGTGGCCA  50
      |||||||||| |||||| |||||| ||||||||||||||||| | ||| |
seq2  GCATCTTTCA-CCCAGATTCAAAG-CCATGGCATGGCATCTG-GGGGCGA  47

seq1  AACTCAGGTCATGCAATATTTCTGTGTTTGTCAGAATGGGGAGAGAAATG  100
      |   ||||||||||||||||   |||||||||||||||||   |||||||
seq2  ACTCCAGGTCATGCAATATTCTGGTGTTTGTCAGAATGGGAGAAGAAATG  97

seq1  CATACATCTTTGTTACTGTAATGGTTGGTAAATACTCGTTTATTGTTATA  150
      |||||||||||||||| ||||||||||||||||||| ||||||  |||||
seq2  CATACATCTTTGTTAC-GTAATGGTTGGTAAATACTGGTTTATGTTTATA  146

seq1  TAAATATTGGACATCACAGAAACAATTTTCCTTAGCAAATAGTGCTCAGT  200
      |||| |||| |||||||  |||||| ||| |||| |||||||||||||||
seq2  TAAA-ATTGAACATCACGAAAACAAATTT-CTTAACAAATAGTGCTCAGT  194

seq1  TAGCAAGATGAATATCAACGGACTGCAGAGAATGATGCATGTTTGACTTG  250
      |||| | |  ||| ||||| ||||||| |||||||||| |||||||||||
seq2  TAGCCAAAATAATTTCAAC-GACTGCAAAGAATGATGC-TGTTTGACTTG  242

seq1  TTCTTGTTGGATG--TAGAGAAAGCCTTTCAAGGAAGACAAAGTAGGTGT  298
      ||||||||||| |   ||| ||  |||| |||| | | ||||| ||||||
seq2  TTCTTGTTGGAAGGTAAGAAAAGCCCTTCCAAGAAGGCCAAAGGAGGTGT  292

seq1  TTTTACAATTCT-GGGAAATAGGGAATGC-AATGAGACTGGAGAAGGAAA  346
      |||||||||| | |||||||||||||||| ||||||||||||||||||||
seq2  TTTTACAATTTTGGGGAAATAGGGAATGCAAATGAGACTGGAGAAGGAAA  342

seq1  TTCATATTGTATGAACATCGATACAACATATTTAATCAA-GAATACTAGT  395
      ||||||||| ||||||||||||||||||| ||| ||||| || |||||||
seq2  TTCATATTGGATGAACATCGATACAACATTTTTTATCAAGGATTACTAGT  392

seq1  G-CCAGAGGCATTATA-TTTAGATAAATAGAA-TTTTTAAAGACTTGAAA  442
      | || ||||||||||| ||||||||||||||| |||||||||||||||||
seq2  GCCCGGAGGCATTATATTTTAGATAAATAGAATTTTTTAAAGACTTGAAA  442

seq1  TGCAAGTC-TTTATAAACTATACATTTTT--GAAATTTCTTTCAGCTTCT  489
      |||||||| ||||||||||||||||||||   ||||||||||||||||||
seq2  TGCAAGTCTTTTATAAACTATACATTTTTTGAAAATTTCTTTCAGCTTCT  492

seq1  TGAAAATCTACCTTGAGCA-CCCTCATAGAGGCAGAGGGGGGAGGGATAG  538
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGAAAATCTACCTTGAGCACCCCTCATAGAGGCAGAGGGGGGAGGGATAG  542

seq1  GGGGATTGTGGAAAGGAAATTGGGAAGGGGAATAACATTTGAAATATACA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTGTGGAAAGGAAATTGGGAAGGGGAATAACATTTGAAATATACA  592

seq1  TAAATAAAATAACCAATAAAAAGAAAATCATCCTTGTATATTAAAAAATC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAATAACCAATAAAAAGAAAATCATCCTTGTATATTAAAAAATC  642

seq1  AAATAATATTTAAATAATAACAATACAATTATTTGTTGGTATCCATGGGT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATATTTAAATAATAACAATACAATTATTTGTTGGTATCCATGGGT  692

seq1  AACTTCATCCAGGACATCTTGGATAACTAAACTCTTGAACTATTACAGAC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCATCCAGGACATCTTGGATAACTAAACTCTTGAACTATTACAGAC  742

seq1  TATAATAGGGCTTGTATGTAATTGATATTCTCCTAAACACTTTATATTAT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAGGGCTTGTATGTAATTGATATTCTCCTAAACACTTTATATTAT  792

seq1  CTCTAGATTATTACTGTACCCCAAGTAATGCAATCACTGACAATAGATTT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGATTATTACTGTACCCCAAGTAATGCAATCACTGACAATAGATTT  842

seq1  AAAAAAATACCTCGTACATCTTACACAAATCTCTAGACCACACAGAAAAG  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATACCTCGTACATCTTACACAAATCTCTAGACCACACAGAAAAG  892

seq1  TTTATAATACACCCTGAAGTCACCTAAAACTTAACCTACTATGTAATCAT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATACACCCTGAAGTCACCTAAAACTTAACCTACTATGTAATCAT  942

seq1  TCTATTTGTTTAAATTTTCTTTAAGAAAACAATGTTACAACCAATTTTGC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTGTTTAAATTTTCTTTAAGAAAACAATGTTACAACCAATTTTGC  992

seq1  TTGCCATGGATCTCCTATGTCAACTTCTGAATTC  1022
      ||||||||||||||||||||||||||||||||||
seq2  TTGCCATGGATCTCCTATGTCAACTTCTGAATTC  1026