BAC Information

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BAC

Clone NameB6Ng01-036H22
Chromosome10 (Build37)4 (Build37)
Map Location 104,054,047 - 104,054,32618,507,360 - 18,507,922
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036H22.bB6Ng01-036H22.g
ACCDH864652DH864653
length874563
definitionDH864652|Mus musculus domesticus DNA, BAC clone: B6Ng01-036H22, 5' end.DH864653|Mus musculus domesticus DNA, BAC clone: B6Ng01-036H22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,054,047 - 104,054,326)(18,507,360 - 18,507,922)
sequence
gaattctcaactgaggaatactgaatggctgaaaagtacctaaaaagtgt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccttgagatt
ctacctcacaccagtcagaatagctaagatcagaaattcaggtgacagca
gatgctggcaaggttggggagaaagaggaacactcctccattgctgttgg
gattgcaagctggtacaaccactctggaaaccagtctggaggttcctcca
aaaattggacatagtactaccagaaaatccagcaataccacttctgacat
atacccagaagatgctctaatttgtaatacccaagatacaatttgcaaaa
cacatgaaactcaagaagagcgaagaccaaagtgtggacactttacccct
tcttagaattgggaacaaaactcccatggaaggatttacagagtccaaag
tttggagctgtgacgaaagatgaaccacacagagactgctgtacctgggg
atccatcccataatcagccaccgaaggcagacactattgcatatgacagc
aagattttgctgaaaggacactgatatagctgtctcttgtgggggtattc
cagtgcctggcaaacacagaagtgaatgctttcagtcagctattggatgg
aacacagggcccccaatggagcagctagagaaagtacccaaggagctgaa
ggctgaaggggtctttaaccctgatatatatctgtctgcactgatatata
aaataaaatatgaacatgtgactatgatacattttaggctttctagttgc
aactgttctaacagaagaaacaactaaaaatgtaatggtcattgctatgt
taattttttatgcttggtgtccca
gaattccagggccaggaagcaagagtgggtggattggggagaagggcggg
gtgaggctatagggggctttgtggatagcagttgaaatgtaaatgaagaa
aatatctaataaaaaaatcccttgttcctgtttttttttaagttatttaa
aactgtaatttccttaattttttactggttcataaactttgcaattatta
ttacttattttaatgaataagattttcttcatagtgccatcccatatacc
accaccaaaaccagacactattgcagatgccaccaagagcttgctgacgg
gaacctgacagagttgtctgctgagacgccctgccagtgactgacaaata
cgcaagtggatgcttatactcttccatttgatgatgcacagggtatttga
cctaaccggtacctccagagcttcctgggacttaaccaccaatgaaagaa
aacacaccatgggactcttggctctatctgcatatgtcgcataggatgtc
ctagttgatcatcaatgaaaggagaggtacttgcacccgtgaaggttcta
tgatccagtatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054047_104054326
seq2: B6Ng01-036H22.b_82_359 (reverse)

seq1  GCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAG  50
      ||||||||||| ||||||  |||||| |||||||||||||  || |||||
seq2  GCATCTTCTGGGTATATG-TCAGAAGTGGTATTGCTGGATTTTCTGGTAG  49

seq1  TACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGTGGTT  100
      ||||||||||||||||  || ||||| |||||| | ||||||||||||||
seq2  TACTATGTCCAATTTTTGGAGGAACCTCCAGACTGGTTTCCAGAGTGGTT  99

seq1  GTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCA  150
      |||| ||| |||||||||| || |||||||||||||||||||||||||| 
seq2  GTACCAGCTTGCAATCCCAACAGCAATGGAGGAGTGTTCCTCTTTCTCCC  149

seq1  CATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCT  200
      || ||| |||||||||||||||||||||||||| |||||||||| |||||
seq2  CAACCTTGCCAGCATCTGCTGTCACCTGAATTTCTGATCTTAGCTATTCT  199

seq1  GACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGA  250
      |||||||||||||| |||||||| ||||||||||||||||||||||||||
seq2  GACTGGTGTGAGGTAGAATCTCAAGGTTGTTTTGATTTGCATTTCCCTGA  249

seq1  TGATTAAGGATGTTGAACATTTTTTCAGGT  280
      ||||||||||||||||||| ||||| ||||
seq2  TGATTAAGGATGTTGAACACTTTTT-AGGT  278

seq1: chr4_18507360_18507922
seq2: B6Ng01-036H22.g_67_629

seq1  GAATTCCAGGGCCAGGAAGCAAGAGTGGGTGGATTGGGGAGAAGGGCGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCCAGGAAGCAAGAGTGGGTGGATTGGGGAGAAGGGCGGG  50

seq1  GTGAGGCTATAGGGGGCTTTGTGGATAGCAGTTGAAATGTAAATGAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGCTATAGGGGGCTTTGTGGATAGCAGTTGAAATGTAAATGAAGAA  100

seq1  AATATCTAATAAAAAAATCCCTTGTTCCTGTTTTTTTTTAAGTTATTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTAATAAAAAAATCCCTTGTTCCTGTTTTTTTTTAAGTTATTTAA  150

seq1  AACTGTAATTTCCTTAATTTTTTACTGGTTCATAAACTTTGCAATTATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAATTTCCTTAATTTTTTACTGGTTCATAAACTTTGCAATTATTA  200

seq1  TTACTTATTTTAATGAATAAGATTTTCTTCAGAGTGCCATCCCATAGACA  250
      ||||||||||||||||||||||||||||||| |||||||||||||| || 
seq2  TTACTTATTTTAATGAATAAGATTTTCTTCATAGTGCCATCCCATATACC  250

seq1  ACCACCAAAACCAGACACTATTGCAGATGCCAACAAGAGCTTGCTGACAG  300
      |||||||||||||||||||||||||||||||| ||||||||||||||| |
seq2  ACCACCAAAACCAGACACTATTGCAGATGCCACCAAGAGCTTGCTGACGG  300

seq1  GAACCTGACAGAGTTGTCTGCTGAGACGCCCTGCCAGTGACTGACAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGACAGAGTTGTCTGCTGAGACGCCCTGCCAGTGACTGACAAATA  350

seq1  CAGAAGTGGATGCTTATAGTCATCCATTTGATGATGCACAGGGTATTTGA  400
      |  ||||||||||||||| || ||||||||||||||||||||||||||||
seq2  CGCAAGTGGATGCTTATACTCTTCCATTTGATGATGCACAGGGTATTTGA  400

seq1  CCTAACCGGTACCTCCAGAGCTACCTGGGACTAAACCACCAATGAAAGAA  450
      |||||||||||||||||||||| ||||||||| |||||||||||||||||
seq2  CCTAACCGGTACCTCCAGAGCTTCCTGGGACTTAACCACCAATGAAAGAA  450

seq1  AACACACGATGGGACTCATGGCTCTAGCTGCATATGTAGCAGAGGATGTC  500
      ||||||| ||||||||| |||||||| |||||||||| ||| ||||||||
seq2  AACACACCATGGGACTCTTGGCTCTATCTGCATATGTCGCATAGGATGTC  500

seq1  CTAGTTGATCATCAATGGGAGGAGAGGTTCTTGGTCCTGTGAAGGTTCTA  550
      |||||||||||||||||  ||||||||| ||||  || ||||||||||||
seq2  CTAGTTGATCATCAATGAAAGGAGAGGTACTTGCACCCGTGAAGGTTCTA  550

seq1  TGCTCCAGTATAG  563
      || ||||||||||
seq2  TGATCCAGTATAG  563